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The map label for this gene is yciC [H]

Identifier: 170079249

GI number: 170079249

Start: 2788546

End: 2789691

Strand: Direct

Name: yciC [H]

Synonym: SYNPCC7002_A2655

Alternate gene names: 170079249

Gene position: 2788546-2789691 (Clockwise)

Preceding gene: 170079248

Following gene: 170079250

Centisome position: 92.7

GC content: 47.29

Gene sequence:

>1146_bases
ATGCCCACAGTCAGTAGCCAAGCCCCAGGTGCCGATACCTTAGATGCCAGTAAAAGTGGCCTTCCCGTAACGATTATCAC
CGGATTTCTCGGCAGCGGCAAAACGACACTACTAAACCACATCCTCAGCAACCAAGAGGGACTTAAAACTGCTGTCCTCG
TGAACGAATTTGGGGAAATCGGCATTGATAATGAGCTAATTGTCACCACCGAAGACAACATGGTGGAACTCAGCAACGGC
TGTGTCTGCTGCACCATCAATGAAGATCTGGTGAATGCGGTGCATAAAATCCTTGATCGGGGTGACAAAATTGATTATCT
CGTCGTTGAAACAACGGGGCTGGCAGATCCATTACCTGTGGCCTTGACCTTCCTGGGGACAGAGTTACGAGACCTAACCC
GCCTAGATTCCATTGTGACCATGGTGGATTGTGCCAACTTTAGTTTGGATTTATTTAATAGTGAAGCGGCTTACAGCCAA
ATCGCCTACGGTGACATCATCGTGTTGAATAAAACGGATTTGGTTGAGGAGTCAGACGTTGATGCCCTAGAAGTCAGAAT
CCGCGACATTAAAGAAGGGGCTAGACTCCTGCGCACCCAAAAGTCTGAAGTACCCTTGCCGTTGCTACTCAGTGTGGGTC
TTTTTGAGTCGGATAAGTATTTTGATGCGGCAGATACTCATGTGCATCACCACCACAGCCACGATCACCACGACCACGAC
CATGGGCATAACCATGACCACCACGATCATGACCATGTTTGCACCCCAGAGTGCGACCATGACCACGACCATGAACACCA
TCATCACCACTCAAACCATTTAGAAAACGATGGATTTACGTCAATTTCTTTCCAAAGTGACAAACCCTTTGCGATCCGCA
AGTTTCAATATTTCCTAGATAATCAGTTACCCGTGAATGTGTTCCGGGCGAAGGGAATTCTGTGGTTTGATGAAAGCCCG
CTACGCCATGTGTTTCACCTGAGTGGAAAGCGGTTTACGATCGATGATTCGGAATGGAAACCTGGGGAAACGAAAAAAAA
TCAGTTAGTCTTGATCGGCCAAGATTTAGATGAGGCAACGTTACGACAACAGATAGAAAACTGTTTCTGCATGCCCTCCA
AAAATCGTGGTCAGGGTTTTTCGTAA

Upstream 100 bases:

>100_bases
GCATTCCTAACTTTTCCCGAAGCATCGCCCCGACTCTAGACGCCAAAAATACTGTGTAAGATAAGAAGAAGTTGTTTTCT
AATTGAAAGTGAAAAATATT

Downstream 100 bases:

>100_bases
TATCATTTCATGTGCCAACGGCATTAACCGCTGAACGGCCAATCTACACAACGCCTGGGGTAAGGAAAGTCAATTTCTTA
CCTCTTTTTCATCTCGGTAA

Product: CobW/P47K family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MPTVSSQAPGADTLDASKSGLPVTIITGFLGSGKTTLLNHILSNQEGLKTAVLVNEFGEIGIDNELIVTTEDNMVELSNG
CVCCTINEDLVNAVHKILDRGDKIDYLVVETTGLADPLPVALTFLGTELRDLTRLDSIVTMVDCANFSLDLFNSEAAYSQ
IAYGDIIVLNKTDLVEESDVDALEVRIRDIKEGARLLRTQKSEVPLPLLLSVGLFESDKYFDAADTHVHHHHSHDHHDHD
HGHNHDHHDHDHVCTPECDHDHDHEHHHHHSNHLENDGFTSISFQSDKPFAIRKFQYFLDNQLPVNVFRAKGILWFDESP
LRHVFHLSGKRFTIDDSEWKPGETKKNQLVLIGQDLDEATLRQQIENCFCMPSKNRGQGFS

Sequences:

>Translated_381_residues
MPTVSSQAPGADTLDASKSGLPVTIITGFLGSGKTTLLNHILSNQEGLKTAVLVNEFGEIGIDNELIVTTEDNMVELSNG
CVCCTINEDLVNAVHKILDRGDKIDYLVVETTGLADPLPVALTFLGTELRDLTRLDSIVTMVDCANFSLDLFNSEAAYSQ
IAYGDIIVLNKTDLVEESDVDALEVRIRDIKEGARLLRTQKSEVPLPLLLSVGLFESDKYFDAADTHVHHHHSHDHHDHD
HGHNHDHHDHDHVCTPECDHDHDHEHHHHHSNHLENDGFTSISFQSDKPFAIRKFQYFLDNQLPVNVFRAKGILWFDESP
LRHVFHLSGKRFTIDDSEWKPGETKKNQLVLIGQDLDEATLRQQIENCFCMPSKNRGQGFS
>Mature_380_residues
PTVSSQAPGADTLDASKSGLPVTIITGFLGSGKTTLLNHILSNQEGLKTAVLVNEFGEIGIDNELIVTTEDNMVELSNGC
VCCTINEDLVNAVHKILDRGDKIDYLVVETTGLADPLPVALTFLGTELRDLTRLDSIVTMVDCANFSLDLFNSEAAYSQI
AYGDIIVLNKTDLVEESDVDALEVRIRDIKEGARLLRTQKSEVPLPLLLSVGLFESDKYFDAADTHVHHHHSHDHHDHDH
GHNHDHHDHDHVCTPECDHDHDHEHHHHHSNHLENDGFTSISFQSDKPFAIRKFQYFLDNQLPVNVFRAKGILWFDESPL
RHVFHLSGKRFTIDDSEWKPGETKKNQLVLIGQDLDEATLRQQIENCFCMPSKNRGQGFS

Specific function: May bind GTP. Might act as metal chaperone (Potential). Contributes to optimal growth under starvation for zinc [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=368, Percent_Identity=31.7934782608696, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI126722884, Length=368, Percent_Identity=31.7934782608696, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI148727351, Length=368, Percent_Identity=31.7934782608696, Blast_Score=145, Evalue=7e-35,
Organism=Homo sapiens, GI223941779, Length=207, Percent_Identity=41.5458937198068, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI146231952, Length=368, Percent_Identity=31.25, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI223941776, Length=348, Percent_Identity=30.1724137931034, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI119120938, Length=139, Percent_Identity=41.726618705036, Blast_Score=102, Evalue=6e-22,
Organism=Escherichia coli, GI87082430, Length=351, Percent_Identity=31.0541310541311, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788499, Length=163, Percent_Identity=35.5828220858896, Blast_Score=86, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6324356, Length=244, Percent_Identity=34.0163934426229, Blast_Score=123, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 42734; Mature: 42603

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVSSQAPGADTLDASKSGLPVTIITGFLGSGKTTLLNHILSNQEGLKTAVLVNEFGEI
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEHHHHHHHCC
GIDNELIVTTEDNMVELSNGCVCCTINEDLVNAVHKILDRGDKIDYLVVETTGLADPLPV
CCCCCEEEEECCCEEEECCCEEEEEECHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHH
ALTFLGTELRDLTRLDSIVTMVDCANFSLDLFNSEAAYSQIAYGDIIVLNKTDLVEESDV
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCEEEECCCCCCCCCCC
DALEVRIRDIKEGARLLRTQKSEVPLPLLLSVGLFESDKYFDAADTHVHHHHSHDHHDHD
HHHHHHHHHHHHHHHHHHHHCCCCCEEHEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCC
HGHNHDHHDHDHVCTPECDHDHDHEHHHHHSNHLENDGFTSISFQSDKPFAIRKFQYFLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHC
NQLPVNVFRAKGILWFDESPLRHVFHLSGKRFTIDDSEWKPGETKKNQLVLIGQDLDEAT
CCCCEEEEEECCEEEECCCHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCHHH
LRQQIENCFCMPSKNRGQGFS
HHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PTVSSQAPGADTLDASKSGLPVTIITGFLGSGKTTLLNHILSNQEGLKTAVLVNEFGEI
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEHHHHHHHCC
GIDNELIVTTEDNMVELSNGCVCCTINEDLVNAVHKILDRGDKIDYLVVETTGLADPLPV
CCCCCEEEEECCCEEEECCCEEEEEECHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHH
ALTFLGTELRDLTRLDSIVTMVDCANFSLDLFNSEAAYSQIAYGDIIVLNKTDLVEESDV
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCEEEECCCCCCCCCCC
DALEVRIRDIKEGARLLRTQKSEVPLPLLLSVGLFESDKYFDAADTHVHHHHSHDHHDHD
HHHHHHHHHHHHHHHHHHHHCCCCCEEHEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCC
HGHNHDHHDHDHVCTPECDHDHDHEHHHHHSNHLENDGFTSISFQSDKPFAIRKFQYFLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHC
NQLPVNVFRAKGILWFDESPLRHVFHLSGKRFTIDDSEWKPGETKKNQLVLIGQDLDEAT
CCCCEEEEEECCEEEECCCHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCHHH
LRQQIENCFCMPSKNRGQGFS
HHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 9811636 [H]