| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is purB [H]
Identifier: 170079247
GI number: 170079247
Start: 2786141
End: 2787436
Strand: Direct
Name: purB [H]
Synonym: SYNPCC7002_A2653
Alternate gene names: 170079247
Gene position: 2786141-2787436 (Clockwise)
Preceding gene: 170079246
Following gene: 170079248
Centisome position: 92.62
GC content: 54.24
Gene sequence:
>1296_bases GTGATTGAACGTTATACCCTCCCCGAAATGGGGAATCTCTGGACAAATGAAGCAAAACTCAAGGCCTGGCTGAAAGTCGA AGTTGCCGTCTGTGAAGCGCAAGCAGAGTTAGGGTATATCCCCACAGAAGCCGTAGAAGAAATCAAAGCCAAAGCCCAGT TCGACGAAGCGCGGGTTTTAGAAATTGAGAAAGAAGTGCGCCATGATGTGATCGCTTTTCTCACCAACGTCAATGAATAT GTCGGCGATGCGGGGCGTTATATTCACCTCGGCATGACCAGTTCCGATGTTCTGGATACGGCCCTTGCTCTGCAGATGGT GGATAGCCTCGATCTGATCCTGACCTGTGTCGAAGAACTGATCCAAGCGATTCGCTACCAAGCCCAACAACACCGCTACA CCGTCATGGTGGGTCGTTCCCACGGCATCCACGCCGAACCGATGACCTTTGGGTTTAAGCTGGCGGGTTGGCTGGCTGAA ATGCTCCGGAACCGCGATCGCCTAGTCGCTGTGCGCAAAGAAATTGCCGTGGGACAAATCTCTGGCGCTGTGGGAACCTA TGCGAACATTGAACCCCGCGTTGAAGCTTTAGCTTGTCAAAAACTCGGCCTGGATCCCGATACTGCTTCGACCCAGGTGA TTTCCCGCGATCGCCACGCCAACTACATGAACCAACTGGCCGTGTTAGCCGCCAGCATCGAACGCTTTGCCGTGGAAATT CGCAACCTCCAACGCACCGATGTATTAGAAGTCGAAGAATATTTCTCCAAGGGTCAAAAAGGCTCTTCGGCGATGCCCCA CAAACGCAACCCGATCCGTTCTGAACGCTTAACCGGGATGGCGCGCTTGGTGCGGGGTAATGCGATGGCCGCCCTCGAAA ACGTTGCCCTCTGGCATGAGCGGGACATTTCCCACAGTTCCGTCGAGCGGGTCGCCGTGCCCGATAGCTGCATCCTCGTG CATTTTATGCTGCGGGAAACCATTAGCCTCGTGAAGAATCTTTTGGTGTATCCAGAGAACATGAAACGTAACATGAACGT CTATGGCGGCGTGATTTTCAGTCAGCGGGTACTGCTGGCCCTCGTCGAGAAAGGCTTGACCCGTGAGGATGCCTACCGCC TTGTGCAAGGTTGCGCCCACACCGCCTGGAACACTGAAGGCGGGAACTTCCGCGCCAACGTCGAGCAAGATGCGGAAATT ACCCAACACCTCTCTGGCGAGGAGATTGCAGCCTGCTTTGATCCGCAATTCCAACTGCGTCACCTCGATCAAGTCTACCA ACGCCTCGGTATCTAA
Upstream 100 bases:
>100_bases CCCAAAGGCGATCGCTTCCCCCGTAAACCCCCGTAAAAACATTGCCAAAATTTGAACAACCCCTTGTAAAATAGCTAGGT TGTATTCTGCGGCACATCTC
Downstream 100 bases:
>100_bases ACCTTTCGTTTAACCGAGGTCAATTTGGCGATCGCCTTTTTTGAACTAAGATCCAAGAGAGGCGATTTTTTATGGATAAA TATTGATCTTCATGGAAACA
Product: adenylosuccinate lyase
Products: NA
Alternate protein names: ASL; Adenylosuccinase; ASase [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MIERYTLPEMGNLWTNEAKLKAWLKVEVAVCEAQAELGYIPTEAVEEIKAKAQFDEARVLEIEKEVRHDVIAFLTNVNEY VGDAGRYIHLGMTSSDVLDTALALQMVDSLDLILTCVEELIQAIRYQAQQHRYTVMVGRSHGIHAEPMTFGFKLAGWLAE MLRNRDRLVAVRKEIAVGQISGAVGTYANIEPRVEALACQKLGLDPDTASTQVISRDRHANYMNQLAVLAASIERFAVEI RNLQRTDVLEVEEYFSKGQKGSSAMPHKRNPIRSERLTGMARLVRGNAMAALENVALWHERDISHSSVERVAVPDSCILV HFMLRETISLVKNLLVYPENMKRNMNVYGGVIFSQRVLLALVEKGLTREDAYRLVQGCAHTAWNTEGGNFRANVEQDAEI TQHLSGEEIAACFDPQFQLRHLDQVYQRLGI
Sequences:
>Translated_431_residues MIERYTLPEMGNLWTNEAKLKAWLKVEVAVCEAQAELGYIPTEAVEEIKAKAQFDEARVLEIEKEVRHDVIAFLTNVNEY VGDAGRYIHLGMTSSDVLDTALALQMVDSLDLILTCVEELIQAIRYQAQQHRYTVMVGRSHGIHAEPMTFGFKLAGWLAE MLRNRDRLVAVRKEIAVGQISGAVGTYANIEPRVEALACQKLGLDPDTASTQVISRDRHANYMNQLAVLAASIERFAVEI RNLQRTDVLEVEEYFSKGQKGSSAMPHKRNPIRSERLTGMARLVRGNAMAALENVALWHERDISHSSVERVAVPDSCILV HFMLRETISLVKNLLVYPENMKRNMNVYGGVIFSQRVLLALVEKGLTREDAYRLVQGCAHTAWNTEGGNFRANVEQDAEI TQHLSGEEIAACFDPQFQLRHLDQVYQRLGI >Mature_431_residues MIERYTLPEMGNLWTNEAKLKAWLKVEVAVCEAQAELGYIPTEAVEEIKAKAQFDEARVLEIEKEVRHDVIAFLTNVNEY VGDAGRYIHLGMTSSDVLDTALALQMVDSLDLILTCVEELIQAIRYQAQQHRYTVMVGRSHGIHAEPMTFGFKLAGWLAE MLRNRDRLVAVRKEIAVGQISGAVGTYANIEPRVEALACQKLGLDPDTASTQVISRDRHANYMNQLAVLAASIERFAVEI RNLQRTDVLEVEEYFSKGQKGSSAMPHKRNPIRSERLTGMARLVRGNAMAALENVALWHERDISHSSVERVAVPDSCILV HFMLRETISLVKNLLVYPENMKRNMNVYGGVIFSQRVLLALVEKGLTREDAYRLVQGCAHTAWNTEGGNFRANVEQDAEI TQHLSGEEIAACFDPQFQLRHLDQVYQRLGI
Specific function: De novo purine biosynthesis; eighth step. [C]
COG id: COG0015
COG function: function code F; Adenylosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557269, Length=406, Percent_Identity=27.8325123152709, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI183227688, Length=383, Percent_Identity=27.9373368146214, Blast_Score=144, Evalue=1e-34, Organism=Escherichia coli, GI1787376, Length=279, Percent_Identity=31.1827956989247, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1790398, Length=290, Percent_Identity=26.2068965517241, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17508577, Length=380, Percent_Identity=28.9473684210526, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI32564234, Length=349, Percent_Identity=30.6590257879656, Blast_Score=117, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6323391, Length=396, Percent_Identity=27.7777777777778, Blast_Score=152, Evalue=8e-38, Organism=Drosophila melanogaster, GI24647570, Length=380, Percent_Identity=26.3157894736842, Blast_Score=119, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019468 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 - InterPro: IPR004769 [H]
Pfam domain/function: PF10397 ADSL_C; PF00206 Lyase_1 [H]
EC number: =4.3.2.2 [H]
Molecular weight: Translated: 48547; Mature: 48547
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIERYTLPEMGNLWTNEAKLKAWLKVEVAVCEAQAELGYIPTEAVEEIKAKAQFDEARVL CCCCCCCCCCCCCCCCCHHHHHHHEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHH EIEKEVRHDVIAFLTNVNEYVGDAGRYIHLGMTSSDVLDTALALQMVDSLDLILTCVEEL HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH IQAIRYQAQQHRYTVMVGRSHGIHAEPMTFGFKLAGWLAEMLRNRDRLVAVRKEIAVGQI HHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SGAVGTYANIEPRVEALACQKLGLDPDTASTQVISRDRHANYMNQLAVLAASIERFAVEI CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNLQRTDVLEVEEYFSKGQKGSSAMPHKRNPIRSERLTGMARLVRGNAMAALENVALWHE HHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH RDISHSSVERVAVPDSCILVHFMLRETISLVKNLLVYPENMKRNMNVYGGVIFSQRVLLA CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHH LVEKGLTREDAYRLVQGCAHTAWNTEGGNFRANVEQDAEITQHLSGEEIAACFDPQFQLR HHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHCCCCHHHH HLDQVYQRLGI HHHHHHHHHCC >Mature Secondary Structure MIERYTLPEMGNLWTNEAKLKAWLKVEVAVCEAQAELGYIPTEAVEEIKAKAQFDEARVL CCCCCCCCCCCCCCCCCHHHHHHHEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHH EIEKEVRHDVIAFLTNVNEYVGDAGRYIHLGMTSSDVLDTALALQMVDSLDLILTCVEEL HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH IQAIRYQAQQHRYTVMVGRSHGIHAEPMTFGFKLAGWLAEMLRNRDRLVAVRKEIAVGQI HHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SGAVGTYANIEPRVEALACQKLGLDPDTASTQVISRDRHANYMNQLAVLAASIERFAVEI CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNLQRTDVLEVEEYFSKGQKGSSAMPHKRNPIRSERLTGMARLVRGNAMAALENVALWHE HHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH RDISHSSVERVAVPDSCILVHFMLRETISLVKNLLVYPENMKRNMNVYGGVIFSQRVLLA CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHH LVEKGLTREDAYRLVQGCAHTAWNTEGGNFRANVEQDAEITQHLSGEEIAACFDPQFQLR HHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHCCCCHHHH HLDQVYQRLGI HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]