| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079243
Identifier: 170079243
GI number: 170079243
Start: 2784506
End: 2785222
Strand: Direct
Name: 170079243
Synonym: SYNPCC7002_A2649
Alternate gene names: NA
Gene position: 2784506-2785222 (Clockwise)
Preceding gene: 170079242
Following gene: 170079244
Centisome position: 92.57
GC content: 53.0
Gene sequence:
>717_bases ATGATTTTTGATGCGTCAAACTTAGGCTACTGGGTGCTCCTGGGGAGTGGCATCCTGTTGTATTTGTTTGTCATTTTCTC TGGGGGTGGGGACGATGACCTCGATATGGAAGCCGATTTTGATGCAGACATCGACGCCGATATAGACTTAGATGCCGACG TTGATGGTGATCTCGATGGAGATACCGAGGTTGAGGGCGAAGGGTTTGGTCTCTGGTCGGTGCTGTCTTGGTTTGGCTTT GGGCAAGCGCCGTTAATGTTGCTGCTGGCCACAGATCTCAGTCTGTGGGGTCTGTTGGGGTGGATGTTCAACGTGGGCCT GAGGACACCGACGGGATTTTTAGGGATTGTGGTCTTTTTTGGGAGTGGGGCGATCGCCTTTTGGATCGGGAAACTGTTGG CTTACCCCCTAGGGAAAGTATTTGCCGCCTTTGGGGAAGATGTCAGCAGCGATCGCCTGATTGGGTGCCTGGGGGTGGTC TCTTCTAAAACTCTTCCCCACTATGTCGCTGGCAAAATTGGCCAGGCGGATGTGTACGATTCGGCTCGGAACCTGATGAC TGTCCCGGTGAGTTTACCCCACTGGGCCGAAGTGATTCCCCGACGGGGCGACAAAATTTTGATCGTTGATCGCACCGAAC ATAGTTATCTGGCGATCGCCAAAGATAGTTCCGACGAAGACCGCTGGCTCGCTGAAGTGAAACAGCTTCCCCAATAA
Upstream 100 bases:
>100_bases TCTAGAGCTAGATTATGGTGGTGGCGATCGCCAAAAAAATTCCTAGATTTGGGGGGCGACCCGTGCGAATTTTTTACTCT GTCCCGGATATGGTGCGTCC
Downstream 100 bases:
>100_bases TCTTTTCCCCTTTTGCCCTAGGATAAGGCCAGGCCAAATCGCACCTTGTGGAGAGTGAGCACCGATGCCGATCGAAATTA TTGTGATCGTCGCCGCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MIFDASNLGYWVLLGSGILLYLFVIFSGGGDDDLDMEADFDADIDADIDLDADVDGDLDGDTEVEGEGFGLWSVLSWFGF GQAPLMLLLATDLSLWGLLGWMFNVGLRTPTGFLGIVVFFGSGAIAFWIGKLLAYPLGKVFAAFGEDVSSDRLIGCLGVV SSKTLPHYVAGKIGQADVYDSARNLMTVPVSLPHWAEVIPRRGDKILIVDRTEHSYLAIAKDSSDEDRWLAEVKQLPQ
Sequences:
>Translated_238_residues MIFDASNLGYWVLLGSGILLYLFVIFSGGGDDDLDMEADFDADIDADIDLDADVDGDLDGDTEVEGEGFGLWSVLSWFGF GQAPLMLLLATDLSLWGLLGWMFNVGLRTPTGFLGIVVFFGSGAIAFWIGKLLAYPLGKVFAAFGEDVSSDRLIGCLGVV SSKTLPHYVAGKIGQADVYDSARNLMTVPVSLPHWAEVIPRRGDKILIVDRTEHSYLAIAKDSSDEDRWLAEVKQLPQ >Mature_238_residues MIFDASNLGYWVLLGSGILLYLFVIFSGGGDDDLDMEADFDADIDADIDLDADVDGDLDGDTEVEGEGFGLWSVLSWFGF GQAPLMLLLATDLSLWGLLGWMFNVGLRTPTGFLGIVVFFGSGAIAFWIGKLLAYPLGKVFAAFGEDVSSDRLIGCLGVV SSKTLPHYVAGKIGQADVYDSARNLMTVPVSLPHWAEVIPRRGDKILIVDRTEHSYLAIAKDSSDEDRWLAEVKQLPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25861; Mature: 25861
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFDASNLGYWVLLGSGILLYLFVIFSGGGDDDLDMEADFDADIDADIDLDADVDGDLDG CEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DTEVEGEGFGLWSVLSWFGFGQAPLMLLLATDLSLWGLLGWMFNVGLRTPTGFLGIVVFF CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHH GSGAIAFWIGKLLAYPLGKVFAAFGEDVSSDRLIGCLGVVSSKTLPHYVAGKIGQADVYD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCHHHH SARNLMTVPVSLPHWAEVIPRRGDKILIVDRTEHSYLAIAKDSSDEDRWLAEVKQLPQ CCCCEEEEECCCCHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCC >Mature Secondary Structure MIFDASNLGYWVLLGSGILLYLFVIFSGGGDDDLDMEADFDADIDADIDLDADVDGDLDG CEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DTEVEGEGFGLWSVLSWFGFGQAPLMLLLATDLSLWGLLGWMFNVGLRTPTGFLGIVVFF CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHH GSGAIAFWIGKLLAYPLGKVFAAFGEDVSSDRLIGCLGVVSSKTLPHYVAGKIGQADVYD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCHHHH SARNLMTVPVSLPHWAEVIPRRGDKILIVDRTEHSYLAIAKDSSDEDRWLAEVKQLPQ CCCCEEEEECCCCHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA