| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079226
Identifier: 170079226
GI number: 170079226
Start: 2765572
End: 2766600
Strand: Reverse
Name: 170079226
Synonym: SYNPCC7002_A2632
Alternate gene names: NA
Gene position: 2766600-2765572 (Counterclockwise)
Preceding gene: 170079228
Following gene: 170079225
Centisome position: 91.97
GC content: 54.13
Gene sequence:
>1029_bases ATGCTGATCATCCCCACGGGGATCGGCGCGAAAATTGGTGGCTATGCGGGGGATGGGATTCCCATTGCACGGCTGATGGC CCAGGTGTGCGATCGCCTGATTACCCACCCCAACGTGTTAAACGGGGCGCAACTCTTTTGGCCAATGGCAAATACGTTCT ATGTAGAAGGCTATGGCCTCGATCAATTCGCTGCGGGGAACTGGGGGTTACGACCCGTGCGACAAAATAAAGTGGGATTA CTCCTCGATCAAGGCATTGAAGCAGAATTAAAAACCCGTCACATCCAGGGAGCCGAAGCTTGCCGCGCGACCTTAGGTTT GCCGATCACAGATTATGTTGTGACGGATGCGCCCTTGAATGTCACCCTCAAAGTTTCGGAAACGGGGGTCAGTTGGGGGA CGATTGAAAATGTGGGCAGTTTGTTGCGGGCGGCGGAAAAACTAATTACCCAGGCCAAGGTGGAGGCGATCGCCGTTGTG GCTCGCTTTCCTGACGACGAAGATAGCGAATTGCTCGCCCAATATCGCCAGGGATCTGGGGTCGATGCCCTCGCGGGTGC TGAGGCAGTGATTTCCCACCTGCTCGTGAAAAAATTTCAGATTCCCTGCGCCCATGCCCCAGCTTTATCGCCTTTACCCA TTGAACCGGAACTTTCCCCAAAAGCCGCTGCCGAAGAATTAGGCTACACTTTTTTGCCCTGTATCCTGGCCGGGTTGAGC TATGCGCCCCAATTTGTCACCACAGGCGATCGCCAAGCCGGAGAGATCTGGGCGGATCAGGTCGATAGCCTAGTGATCCC CGCCAGTGCCTGTGGCGGTAGTGCCGTTTTGAGCCTTGCCCAGACCCAAACATTGATCATTGCTGTAAACGAAAATGACA CTGCATTAAGCATTTTTCCAGAATCCGTTGGGATTAAAGCCCGTCGGGTAGACTCATACTTGGAGGCAATTGGGATCATG GTCGCCCACCGTGCTGGATTAGATTTTTCGAGTCTGCGACCCACTGTGCCCCCCCTCAATGCAATCTAG
Upstream 100 bases:
>100_bases AGCGGTTACCGAATTAGTGCTAAATTTCTCAAACGTTCTTTTCCAGTGAATTTTTATGTTCCTCGCACCGACCCCAAGCC GCACTGTTCCCTACACCTCA
Downstream 100 bases:
>100_bases ATCAATATTTATTGTGAATCAATCCAACCAACCGCCCTTAGAACCGTTATCCCGCCAACAGGTGCTCCTTCTTATGGGGA TCACAGCGCTGTTGCTGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MLIIPTGIGAKIGGYAGDGIPIARLMAQVCDRLITHPNVLNGAQLFWPMANTFYVEGYGLDQFAAGNWGLRPVRQNKVGL LLDQGIEAELKTRHIQGAEACRATLGLPITDYVVTDAPLNVTLKVSETGVSWGTIENVGSLLRAAEKLITQAKVEAIAVV ARFPDDEDSELLAQYRQGSGVDALAGAEAVISHLLVKKFQIPCAHAPALSPLPIEPELSPKAAAEELGYTFLPCILAGLS YAPQFVTTGDRQAGEIWADQVDSLVIPASACGGSAVLSLAQTQTLIIAVNENDTALSIFPESVGIKARRVDSYLEAIGIM VAHRAGLDFSSLRPTVPPLNAI
Sequences:
>Translated_342_residues MLIIPTGIGAKIGGYAGDGIPIARLMAQVCDRLITHPNVLNGAQLFWPMANTFYVEGYGLDQFAAGNWGLRPVRQNKVGL LLDQGIEAELKTRHIQGAEACRATLGLPITDYVVTDAPLNVTLKVSETGVSWGTIENVGSLLRAAEKLITQAKVEAIAVV ARFPDDEDSELLAQYRQGSGVDALAGAEAVISHLLVKKFQIPCAHAPALSPLPIEPELSPKAAAEELGYTFLPCILAGLS YAPQFVTTGDRQAGEIWADQVDSLVIPASACGGSAVLSLAQTQTLIIAVNENDTALSIFPESVGIKARRVDSYLEAIGIM VAHRAGLDFSSLRPTVPPLNAI >Mature_342_residues MLIIPTGIGAKIGGYAGDGIPIARLMAQVCDRLITHPNVLNGAQLFWPMANTFYVEGYGLDQFAAGNWGLRPVRQNKVGL LLDQGIEAELKTRHIQGAEACRATLGLPITDYVVTDAPLNVTLKVSETGVSWGTIENVGSLLRAAEKLITQAKVEAIAVV ARFPDDEDSELLAQYRQGSGVDALAGAEAVISHLLVKKFQIPCAHAPALSPLPIEPELSPKAAAEELGYTFLPCILAGLS YAPQFVTTGDRQAGEIWADQVDSLVIPASACGGSAVLSLAQTQTLIIAVNENDTALSIFPESVGIKARRVDSYLEAIGIM VAHRAGLDFSSLRPTVPPLNAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021763 [H]
Pfam domain/function: PF11805 DUF3326 [H]
EC number: NA
Molecular weight: Translated: 36215; Mature: 36215
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIIPTGIGAKIGGYAGDGIPIARLMAQVCDRLITHPNVLNGAQLFWPMANTFYVEGYGL CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCCC DQFAAGNWGLRPVRQNKVGLLLDQGIEAELKTRHIQGAEACRATLGLPITDYVVTDAPLN CCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHCCCCEEHEEEECCCCE VTLKVSETGVSWGTIENVGSLLRAAEKLITQAKVEAIAVVARFPDDEDSELLAQYRQGSG EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCC VDALAGAEAVISHLLVKKFQIPCAHAPALSPLPIEPELSPKAAAEELGYTFLPCILAGLS CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHC YAPQFVTTGDRQAGEIWADQVDSLVIPASACGGSAVLSLAQTQTLIIAVNENDTALSIFP CCCCEEECCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHCCEEEEEEECCCCCEEEEEC ESVGIKARRVDSYLEAIGIMVAHRAGLDFSSLRPTVPPLNAI HHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC >Mature Secondary Structure MLIIPTGIGAKIGGYAGDGIPIARLMAQVCDRLITHPNVLNGAQLFWPMANTFYVEGYGL CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCCC DQFAAGNWGLRPVRQNKVGLLLDQGIEAELKTRHIQGAEACRATLGLPITDYVVTDAPLN CCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHCCCCEEHEEEECCCCE VTLKVSETGVSWGTIENVGSLLRAAEKLITQAKVEAIAVVARFPDDEDSELLAQYRQGSG EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCC VDALAGAEAVISHLLVKKFQIPCAHAPALSPLPIEPELSPKAAAEELGYTFLPCILAGLS CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHC YAPQFVTTGDRQAGEIWADQVDSLVIPASACGGSAVLSLAQTQTLIIAVNENDTALSIFP CCCCEEECCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHCCEEEEEEECCCCCEEEEEC ESVGIKARRVDSYLEAIGIMVAHRAGLDFSSLRPTVPPLNAI HHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3041005 [H]