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The map label for this gene is 170079220

Identifier: 170079220

GI number: 170079220

Start: 2754441

End: 2755202

Strand: Reverse

Name: 170079220

Synonym: SYNPCC7002_A2626

Alternate gene names: NA

Gene position: 2755202-2754441 (Counterclockwise)

Preceding gene: 170079225

Following gene: 170079214

Centisome position: 91.59

GC content: 54.33

Gene sequence:

>762_bases
ATGAAAAAGCTACTCTTTACCGCCTGTTGTGTTTTGCCTTTGGCGATCGCCCCCCAGGTACGGGCCGAAAACCTAACCCA
CCTCAGCCAACTGCTATCAAGTCGTCAATGTCAGAATTGTCAACTGACCCGGAGCGGCCTTGCCAATGCCCGTTTAGATG
GGGCTGACCTGCGGGGGGCGGATTTGCGTCAAGCGAACTTGAGTCGGGCAGATCTGAGCCTTGCGGATTTGCGGGGGGCC
AATTTAACGGGAGCTTCTTTGGTGGGGGCCAACTTAGCCGGGGCTGACCTAGAAGGGGCTATTTTAGACGGCGCGGATCT
CCGGGAAGCCTATTTAGCCGGAGCAAATTTTACCAATACTTCCCTGCGGACGTTCTACATTGCGCGGGCGGTAGGACTGT
TGGATGCTCCCGTTTCGGCGGAGCAGCTTTATCAATGGGGCTTTGTGGAAGGGGAAAATAAAAATTACCGCATGGCGATC
GCCTACTATGACGCCGCCGCTAACCGAGAACCTGACAATGGGGCCATTTATCTCTCCCGGGCGATCGCCCGCTACCAACT
ACGAGATTTTGCCCAGGCCCAACAGGATGCCACCTTTGCTCAGACCCTGTTCACCAGCCAAGGATCGACCGTTGGAGTGG
ATGCTAGTCAAAGGTTACTCGACGAAATTGACCTCGCCCTCAACCCGAAACAAGATTCTGGGAATACTGCTGGCAATATC
CTCAGCGCCATTAGCTCCGTACTGTTACGCTTCTTCTTTTAA

Upstream 100 bases:

>100_bases
AAAGTGACTGCTACCATGGACGCAGAAAAATCGGTGGTAGCCGGAAACGTTTTGCCCTGATTGATGGTCTACAGTTCCAG
TCCTCCCTCCCCAATTCCCG

Downstream 100 bases:

>100_bases
TGAAAATCTCTAGAGAGGTTTTCGCCATCTCTTTTGTCTCGACCTAAGAGGCTATTTATACAGTAAATGAATTTCCTAAT
TTGTCCCCTAAATCTCCCCC

Product: TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKKLLFTACCVLPLAIAPQVRAENLTHLSQLLSSRQCQNCQLTRSGLANARLDGADLRGADLRQANLSRADLSLADLRGA
NLTGASLVGANLAGADLEGAILDGADLREAYLAGANFTNTSLRTFYIARAVGLLDAPVSAEQLYQWGFVEGENKNYRMAI
AYYDAAANREPDNGAIYLSRAIARYQLRDFAQAQQDATFAQTLFTSQGSTVGVDASQRLLDEIDLALNPKQDSGNTAGNI
LSAISSVLLRFFF

Sequences:

>Translated_253_residues
MKKLLFTACCVLPLAIAPQVRAENLTHLSQLLSSRQCQNCQLTRSGLANARLDGADLRGADLRQANLSRADLSLADLRGA
NLTGASLVGANLAGADLEGAILDGADLREAYLAGANFTNTSLRTFYIARAVGLLDAPVSAEQLYQWGFVEGENKNYRMAI
AYYDAAANREPDNGAIYLSRAIARYQLRDFAQAQQDATFAQTLFTSQGSTVGVDASQRLLDEIDLALNPKQDSGNTAGNI
LSAISSVLLRFFF
>Mature_253_residues
MKKLLFTACCVLPLAIAPQVRAENLTHLSQLLSSRQCQNCQLTRSGLANARLDGADLRGADLRQANLSRADLSLADLRGA
NLTGASLVGANLAGADLEGAILDGADLREAYLAGANFTNTSLRTFYIARAVGLLDAPVSAEQLYQWGFVEGENKNYRMAI
AYYDAAANREPDNGAIYLSRAIARYQLRDFAQAQQDATFAQTLFTSQGSTVGVDASQRLLDEIDLALNPKQDSGNTAGNI
LSAISSVLLRFFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 27200; Mature: 27200

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLFTACCVLPLAIAPQVRAENLTHLSQLLSSRQCQNCQLTRSGLANARLDGADLRGA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCC
DLRQANLSRADLSLADLRGANLTGASLVGANLAGADLEGAILDGADLREAYLAGANFTNT
CHHHHCCCHHCCHHHHCCCCCCCCHHHHCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCC
SLRTFYIARAVGLLDAPVSAEQLYQWGFVEGENKNYRMAIAYYDAAANREPDNGAIYLSR
HHHHHHHHHHHHHHCCCCCHHHHHHCCCEECCCCCEEEEEEEEECCCCCCCCCCEEEHHH
AIARYQLRDFAQAQQDATFAQTLFTSQGSTVGVDASQRLLDEIDLALNPKQDSGNTAGNI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCCCCHHHHH
LSAISSVLLRFFF
HHHHHHHHHHHCC
>Mature Secondary Structure
MKKLLFTACCVLPLAIAPQVRAENLTHLSQLLSSRQCQNCQLTRSGLANARLDGADLRGA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCC
DLRQANLSRADLSLADLRGANLTGASLVGANLAGADLEGAILDGADLREAYLAGANFTNT
CHHHHCCCHHCCHHHHCCCCCCCCHHHHCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCC
SLRTFYIARAVGLLDAPVSAEQLYQWGFVEGENKNYRMAIAYYDAAANREPDNGAIYLSR
HHHHHHHHHHHHHHCCCCCHHHHHHCCCEECCCCCEEEEEEEEECCCCCCCCCCEEEHHH
AIARYQLRDFAQAQQDATFAQTLFTSQGSTVGVDASQRLLDEIDLALNPKQDSGNTAGNI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCCCCHHHHH
LSAISSVLLRFFF
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA