| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is psaI
Identifier: 170079215
GI number: 170079215
Start: 2750702
End: 2750818
Strand: Direct
Name: psaI
Synonym: SYNPCC7002_A2621
Alternate gene names: 170079215
Gene position: 2750702-2750818 (Clockwise)
Preceding gene: 170079212
Following gene: 170079216
Centisome position: 91.44
GC content: 49.57
Gene sequence:
>117_bases ATGAACGGCGCCTACGCAGCTTCTTTTCTGCCTGTAATCCTTGTCCCCTTGGCGGGTGTTGTTTTCCCGGCTTTAGCGAT GGGACTTCTGTTTAACTACATCGAATCTGACGCTTAA
Upstream 100 bases:
>100_bases GTTAAGAATCGTAATGTCTGTTCCCTCCCAAGACCTCTGGCAGTAATATCCAAGGTATTGTGAAAACCAGTTTGTTAATA GCATTTAGGAAAGATTTAAT
Downstream 100 bases:
>100_bases GTAAAAAATTCTGGGCGATCGCCTCAGGAATTTACCTCACATCTAAGATTGTTCTCATTTCCCCATGCACCGTAACTAGA GGTTGTGTGGGGAATTGTTT
Product: photosystem I reaction center subunit VIII
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 38; Mature: 38
Protein sequence:
>38_residues MNGAYAASFLPVILVPLAGVVFPALAMGLLFNYIESDA
Sequences:
>Translated_38_residues MNGAYAASFLPVILVPLAGVVFPALAMGLLFNYIESDA >Mature_38_residues MNGAYAASFLPVILVPLAGVVFPALAMGLLFNYIESDA
Specific function: May help in the organization of the psaL subunit
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Single-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psaI family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSAI_SYNP2 (Q54752)
Other databases:
- EMBL: U58035 - EMBL: CP000951 - RefSeq: YP_001735853.1 - ProteinModelPortal: Q54752 - SMR: Q54752 - GeneID: 6056353 - GenomeReviews: CP000951_GR - KEGG: syp:SYNPCC7002_A2621 - HOGENOM: HBG441847 - GO: GO:0015979 - HAMAP: MF_00431 - InterPro: IPR001302 - ProDom: PD003995 - TIGRFAMs: TIGR03052
Pfam domain/function: PF00796 PSI_8; SSF81540 PSI_su8
EC number: NA
Molecular weight: Translated: 3957; Mature: 3957
Theoretical pI: Translated: 3.55; Mature: 3.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1d4e4e98)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGAYAASFLPVILVPLAGVVFPALAMGLLFNYIESDA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MNGAYAASFLPVILVPLAGVVFPALAMGLLFNYIESDA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8787020