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The map label for this gene is amyB [H]

Identifier: 170079199

GI number: 170079199

Start: 2732437

End: 2733693

Strand: Reverse

Name: amyB [H]

Synonym: SYNPCC7002_A2605

Alternate gene names: 170079199

Gene position: 2733693-2732437 (Counterclockwise)

Preceding gene: 170079200

Following gene: 170079198

Centisome position: 90.88

GC content: 51.71

Gene sequence:

>1257_bases
ATGCCTTCTATGAAGCGAACCCAGCAATCCACCGCTCTTCTTTTAGCCTTATCCCTCGGACTAGGAAGTACATTACCCTT
CCAGGGATCGTTGCTGCAACCCGCAGCGGTGGTGGCCCAAACAAGCCAATTTCCAGATGTTCCGAGTAACTATTGGGCCA
CAGGCTTTATTAATGAATTGGTGAACCGGGGGATCATTGCCGGTTTTCCTGATGGTTCTTTTCGGCCCGATGCGCCTGTG
ACCCGTGCTCAATTTGCGGCCATGGTGCAGAAAGCCCTCCCCAAGAGCCAAGACCGCAATGCGATTAATTTTGTGGATGT
CCCCAGCAGCTATTGGGCTTTTAATGCGATTAATAATGCCTACGAGATGGGCTTTCTTTCGGGATATCCAGGTCAGGTTT
TCCGCCCCGAACAAAATATTCCCCGGGAGCAGGTTTTAGTCGCCCTAGCCAATGGTTTAAATTATTCAGCCCGTAACAAC
ATCAATACCACCCTCGGCTATTACCAGGATGCAGCGAATATTGCTGATTTTGCCCGGAGCCCCATTGCCGCCGCGACAGA
ACAAAAAATGGTGGTGAACTATGCCAATTTGCAACAACTCAATCCCAAGCGCAATGCCACACGGGCTGAGGTGGCCGCGT
TTATTTATCAGGCTCTCTTTTCCCAGGGTCAGGTACAGGCACTAAATTCCCCTTATATCGTTACCCAGGATGTGGTGGCT
GTGGACTATCGCATCACAGCGGGCACGATTATTCCGATTAGTTACACCGCTGACAAAATTCTCTTAACCCAAGATGAAAT
TTTACCGGTGACCCTCACGGTGGATGCCAATATTGTCAATACCCAGGGGATAGTGCTGATTCCCCAGGGCAGTGAAATTC
AAGGGGAGTTCCGACCGTCAGGAAATGGGACGCGCTTTGTCGCCCAACGCCTAGAGTTACCCAACGGCCAAATGTACAAT
ATCAACGCGGCCTCCCAGGTGATCACAGATACGGAGAGTGTGCGTCGGGGCACTGATGTGGGCAATTTGTTGAGAAATGC
GGCCTTAGGTACGGGGGCCGCCGCCGCGATCGCCGCCATTACTGGAGACCGGGCGATCGCCACAGAGGAACTCTTAATTG
GTGCTGGCGCTGGCATCCTCGCCACCTTGATCCCCCAATTTTTGGGTCTTGATCGAGTGGATCTGTTGGTCGTAGAAACC
AATACGGATCTCGATCTCACCTTGGCCAATGACTTGATTCTTCAGGTCAATCCCTAG

Upstream 100 bases:

>100_bases
AAATAATTTGATTTAAGCATTTTTTAAGTGAGAAGTGACGGTAACAACGCTAACCTGAAAATAAGCAGTCACCCTAATCT
GAAACGCAAGGAAAAATAAT

Downstream 100 bases:

>100_bases
GAAAAAGATTGTTTTAGGGTTTTTGAAAATTTGGCGATCGCCTAAGGGGATAATGGGGCTGGTTGGCTAGGGTTTGAGAG
ACATCACCATGCTCGCGCTT

Product: surface layer protein-like protein

Products: NA

Alternate protein names: Alpha-amylase/pullulanase; Pullulanase type II; Alpha-amylase; 1,4-alpha-D-glucan glucanohydrolase; Pullulanase; 1,4-alpha-D-glucan glucanohydrolase; Alpha-dextrin endo-1,6-alpha-glucosidase [H]

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MPSMKRTQQSTALLLALSLGLGSTLPFQGSLLQPAAVVAQTSQFPDVPSNYWATGFINELVNRGIIAGFPDGSFRPDAPV
TRAQFAAMVQKALPKSQDRNAINFVDVPSSYWAFNAINNAYEMGFLSGYPGQVFRPEQNIPREQVLVALANGLNYSARNN
INTTLGYYQDAANIADFARSPIAAATEQKMVVNYANLQQLNPKRNATRAEVAAFIYQALFSQGQVQALNSPYIVTQDVVA
VDYRITAGTIIPISYTADKILLTQDEILPVTLTVDANIVNTQGIVLIPQGSEIQGEFRPSGNGTRFVAQRLELPNGQMYN
INAASQVITDTESVRRGTDVGNLLRNAALGTGAAAAIAAITGDRAIATEELLIGAGAGILATLIPQFLGLDRVDLLVVET
NTDLDLTLANDLILQVNP

Sequences:

>Translated_418_residues
MPSMKRTQQSTALLLALSLGLGSTLPFQGSLLQPAAVVAQTSQFPDVPSNYWATGFINELVNRGIIAGFPDGSFRPDAPV
TRAQFAAMVQKALPKSQDRNAINFVDVPSSYWAFNAINNAYEMGFLSGYPGQVFRPEQNIPREQVLVALANGLNYSARNN
INTTLGYYQDAANIADFARSPIAAATEQKMVVNYANLQQLNPKRNATRAEVAAFIYQALFSQGQVQALNSPYIVTQDVVA
VDYRITAGTIIPISYTADKILLTQDEILPVTLTVDANIVNTQGIVLIPQGSEIQGEFRPSGNGTRFVAQRLELPNGQMYN
INAASQVITDTESVRRGTDVGNLLRNAALGTGAAAAIAAITGDRAIATEELLIGAGAGILATLIPQFLGLDRVDLLVVET
NTDLDLTLANDLILQVNP
>Mature_417_residues
PSMKRTQQSTALLLALSLGLGSTLPFQGSLLQPAAVVAQTSQFPDVPSNYWATGFINELVNRGIIAGFPDGSFRPDAPVT
RAQFAAMVQKALPKSQDRNAINFVDVPSSYWAFNAINNAYEMGFLSGYPGQVFRPEQNIPREQVLVALANGLNYSARNNI
NTTLGYYQDAANIADFARSPIAAATEQKMVVNYANLQQLNPKRNATRAEVAAFIYQALFSQGQVQALNSPYIVTQDVVAV
DYRITAGTIIPISYTADKILLTQDEILPVTLTVDANIVNTQGIVLIPQGSEIQGEFRPSGNGTRFVAQRLELPNGQMYNI
NAASQVITDTESVRRGTDVGNLLRNAALGTGAAAAIAAITGDRAIATEELLIGAGAGILATLIPQFLGLDRVDLLVVETN
TDLDLTLANDLILQVNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Note=It C-terminus may serve as an S-layer anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006048
- InterPro:   IPR013784
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004185
- InterPro:   IPR006589
- InterPro:   IPR002044
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- InterPro:   IPR001119 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02903 Alpha-amylase_N; PF00395 SLH [H]

EC number: =3.2.1.1; =3.2.1.41 [H]

Molecular weight: Translated: 44858; Mature: 44727

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSMKRTQQSTALLLALSLGLGSTLPFQGSLLQPAAVVAQTSQFPDVPSNYWATGFINEL
CCCCHHHHHHHHEEEEEHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHH
VNRGIIAGFPDGSFRPDAPVTRAQFAAMVQKALPKSQDRNAINFVDVPSSYWAFNAINNA
HHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEHHHHCCH
YEMGFLSGYPGQVFRPEQNIPREQVLVALANGLNYSARNNINTTLGYYQDAANIADFARS
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PIAAATEQKMVVNYANLQQLNPKRNATRAEVAAFIYQALFSQGQVQALNSPYIVTQDVVA
CCHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEEEEECEEE
VDYRITAGTIIPISYTADKILLTQDEILPVTLTVDANIVNTQGIVLIPQGSEIQGEFRPS
EEEEEECCEEEEEEECCCEEEEECCCEEEEEEEEECEEECCCCEEEEECCCCCCEEECCC
GNGTRFVAQRLELPNGQMYNINAASQVITDTESVRRGTDVGNLLRNAALGTGAAAAIAAI
CCCHHHHHHHHCCCCCCEEEECHHHHHHHCHHHHHCCCCHHHHHHHHHCCCCHHHEEEEE
TGDRAIATEELLIGAGAGILATLIPQFLGLDRVDLLVVETNTDLDLTLANDLILQVNP
CCCCHHHHHHHEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCEEEEECC
>Mature Secondary Structure 
PSMKRTQQSTALLLALSLGLGSTLPFQGSLLQPAAVVAQTSQFPDVPSNYWATGFINEL
CCCHHHHHHHHEEEEEHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHH
VNRGIIAGFPDGSFRPDAPVTRAQFAAMVQKALPKSQDRNAINFVDVPSSYWAFNAINNA
HHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEHHHHCCH
YEMGFLSGYPGQVFRPEQNIPREQVLVALANGLNYSARNNINTTLGYYQDAANIADFARS
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PIAAATEQKMVVNYANLQQLNPKRNATRAEVAAFIYQALFSQGQVQALNSPYIVTQDVVA
CCHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEEEEECEEE
VDYRITAGTIIPISYTADKILLTQDEILPVTLTVDANIVNTQGIVLIPQGSEIQGEFRPS
EEEEEECCEEEEEEECCCEEEEECCCEEEEEEEEECEEECCCCEEEEECCCCCCEEECCC
GNGTRFVAQRLELPNGQMYNINAASQVITDTESVRRGTDVGNLLRNAALGTGAAAAIAAI
CCCHHHHHHHHCCCCCCEEEECHHHHHHHCHHHHHCCCCHHHHHHHHHCCCCHHHEEEEE
TGDRAIATEELLIGAGAGILATLIPQFLGLDRVDLLVVETNTDLDLTLANDLILQVNP
CCCCHHHHHHHEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8195085 [H]