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The map label for this gene is pilH [H]

Identifier: 170079195

GI number: 170079195

Start: 2727747

End: 2728112

Strand: Reverse

Name: pilH [H]

Synonym: SYNPCC7002_A2601

Alternate gene names: 170079195

Gene position: 2728112-2727747 (Counterclockwise)

Preceding gene: 170079196

Following gene: 170079194

Centisome position: 90.69

GC content: 44.81

Gene sequence:

>366_bases
ATGAAAAAAGTTTTAGTTGTTGATGATTCTAAATCGGAACAAACCCTTGTCCGGGCACTCCTGGAAAAAATGAGCCTAGA
GGTCAGCCTGGCGGACAATGGCGATGAAGCCTTAACTTGGCTGCGCAACCATGACCAACCGGATCTAATTTTCCTCGATA
TTGTGATGCCTGGGCTCAATGGCCTCGATTTATGCCGAGAAATTCGTGAAAGTCTGGGTTACGAGGAGGTGCCAATTATT
TTTTGTTCTAACAAAAGCCAGGACTTCGACCGTTTTTGGGCGTTACGTCAAGGGGGCAATGCTTATTTAACGAAACCCTA
CAGTCCGATGGAATTCATGAAAACAGTCAAAGAGTATTTGGCTTAG

Upstream 100 bases:

>100_bases
CATCAGCGCAATCTACGCCCTAGAGGTTGTATTTCATAATCTCTAAACTCAATTTTCAGAATAAATTGCGCCAAGTTCTA
ACACTGATCAAGAAAATAAG

Downstream 100 bases:

>100_bases
ATAGTGCTGTTTTTTCTTCGATAAAGGTCTGATTTTGCCATGGTCGCTCCCTCTACCCAAACCGATTTCTTCCGGGTTCA
ACTGTATCCTGCTGGGGCTG

Product: CheY subfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MKKVLVVDDSKSEQTLVRALLEKMSLEVSLADNGDEALTWLRNHDQPDLIFLDIVMPGLNGLDLCREIRESLGYEEVPII
FCSNKSQDFDRFWALRQGGNAYLTKPYSPMEFMKTVKEYLA

Sequences:

>Translated_121_residues
MKKVLVVDDSKSEQTLVRALLEKMSLEVSLADNGDEALTWLRNHDQPDLIFLDIVMPGLNGLDLCREIRESLGYEEVPII
FCSNKSQDFDRFWALRQGGNAYLTKPYSPMEFMKTVKEYLA
>Mature_121_residues
MKKVLVVDDSKSEQTLVRALLEKMSLEVSLADNGDEALTWLRNHDQPDLIFLDIVMPGLNGLDLCREIRESLGYEEVPII
FCSNKSQDFDRFWALRQGGNAYLTKPYSPMEFMKTVKEYLA

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=118, Percent_Identity=37.2881355932203, Blast_Score=86, Evalue=9e-19,
Organism=Escherichia coli, GI1786599, Length=116, Percent_Identity=29.3103448275862, Blast_Score=70, Evalue=5e-14,
Organism=Escherichia coli, GI1789809, Length=118, Percent_Identity=30.5084745762712, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI1790863, Length=118, Percent_Identity=29.6610169491525, Blast_Score=62, Evalue=7e-12,
Organism=Escherichia coli, GI145693140, Length=110, Percent_Identity=31.8181818181818, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI1790860, Length=116, Percent_Identity=30.1724137931034, Blast_Score=59, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 13904; Mature: 13904

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLVVDDSKSEQTLVRALLEKMSLEVSLADNGDEALTWLRNHDQPDLIFLDIVMPGLN
CCEEEEEECCCCHHHHHHHHHHHHCEEEEECCCCHHHHHHHHCCCCCCEEEEEEECCCCC
GLDLCREIRESLGYEEVPIIFCSNKSQDFDRFWALRQGGNAYLTKPYSPMEFMKTVKEYL
HHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
A
C
>Mature Secondary Structure
MKKVLVVDDSKSEQTLVRALLEKMSLEVSLADNGDEALTWLRNHDQPDLIFLDIVMPGLN
CCEEEEEECCCCHHHHHHHHHHHHCEEEEECCCCHHHHHHHHCCCCCCEEEEEEECCCCC
GLDLCREIRESLGYEEVPIIFCSNKSQDFDRFWALRQGGNAYLTKPYSPMEFMKTVKEYL
HHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]