Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079186

Identifier: 170079186

GI number: 170079186

Start: 2713818

End: 2714075

Strand: Reverse

Name: 170079186

Synonym: SYNPCC7002_A2592

Alternate gene names: NA

Gene position: 2714075-2713818 (Counterclockwise)

Preceding gene: 170079192

Following gene: 170079185

Centisome position: 90.23

GC content: 51.55

Gene sequence:

>258_bases
ATGTCTGCCCCGCTCCAAATCACCATTAAGCTCTTCGCAATCTACCAAGAAACCTACGGCACCGAAGTTTTACATTGGCA
AGTTGCCCCTGGCAGTACGGTTATGGACGTTTTCCAGCGCATTCTCAGTGAACATCCCAGTTTGGCAGAATGGCAGGCCG
TCACCCGCTTTGGCGTGAATTTAGAATTTGTCTCCCCGGAAACAGTGCTCCAGGAGGGCGATGAGGTGGTTCTGATTCCT
CCTGTCAGTGGTGGTTAA

Upstream 100 bases:

>100_bases
AAAAAATCCTGTCAGCGTGATTCCTTTGGCGAAACCTCAACAACACCGCTATGATCCTCTGAAAATGTCATCACAACTCC
CCCTCACCCGAAAACATTCA

Downstream 100 bases:

>100_bases
TTTTTTGAGCGCACCACCCGCTGGAAAAAATTCCACTACAATACAAAGCGACTTTTGTTCTGTCCTTTGAGTCCATTACC
GTTAGTTCGTTGGTGCCGCC

Product: ThiS family protein

Products: NA

Alternate protein names: ThiamineS; ThiS Family; ThiamineS Protein; ThiS Family Protein; ThiamineS-Like Protein

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MSAPLQITIKLFAIYQETYGTEVLHWQVAPGSTVMDVFQRILSEHPSLAEWQAVTRFGVNLEFVSPETVLQEGDEVVLIP
PVSGG

Sequences:

>Translated_85_residues
MSAPLQITIKLFAIYQETYGTEVLHWQVAPGSTVMDVFQRILSEHPSLAEWQAVTRFGVNLEFVSPETVLQEGDEVVLIP
PVSGG
>Mature_84_residues
SAPLQITIKLFAIYQETYGTEVLHWQVAPGSTVMDVFQRILSEHPSLAEWQAVTRFGVNLEFVSPETVLQEGDEVVLIPP
VSGG

Specific function: Unknown

COG id: COG1977

COG function: function code H; Molybdopterin converting factor, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9400; Mature: 9269

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPLQITIKLFAIYQETYGTEVLHWQVAPGSTVMDVFQRILSEHPSLAEWQAVTRFGVN
CCCCCEEEEEEEEEEHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCE
LEFVSPETVLQEGDEVVLIPPVSGG
EEEECHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure 
SAPLQITIKLFAIYQETYGTEVLHWQVAPGSTVMDVFQRILSEHPSLAEWQAVTRFGVN
CCCCEEEEEEEEEEHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCE
LEFVSPETVLQEGDEVVLIPPVSGG
EEEECHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA