| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079186
Identifier: 170079186
GI number: 170079186
Start: 2713818
End: 2714075
Strand: Reverse
Name: 170079186
Synonym: SYNPCC7002_A2592
Alternate gene names: NA
Gene position: 2714075-2713818 (Counterclockwise)
Preceding gene: 170079192
Following gene: 170079185
Centisome position: 90.23
GC content: 51.55
Gene sequence:
>258_bases ATGTCTGCCCCGCTCCAAATCACCATTAAGCTCTTCGCAATCTACCAAGAAACCTACGGCACCGAAGTTTTACATTGGCA AGTTGCCCCTGGCAGTACGGTTATGGACGTTTTCCAGCGCATTCTCAGTGAACATCCCAGTTTGGCAGAATGGCAGGCCG TCACCCGCTTTGGCGTGAATTTAGAATTTGTCTCCCCGGAAACAGTGCTCCAGGAGGGCGATGAGGTGGTTCTGATTCCT CCTGTCAGTGGTGGTTAA
Upstream 100 bases:
>100_bases AAAAAATCCTGTCAGCGTGATTCCTTTGGCGAAACCTCAACAACACCGCTATGATCCTCTGAAAATGTCATCACAACTCC CCCTCACCCGAAAACATTCA
Downstream 100 bases:
>100_bases TTTTTTGAGCGCACCACCCGCTGGAAAAAATTCCACTACAATACAAAGCGACTTTTGTTCTGTCCTTTGAGTCCATTACC GTTAGTTCGTTGGTGCCGCC
Product: ThiS family protein
Products: NA
Alternate protein names: ThiamineS; ThiS Family; ThiamineS Protein; ThiS Family Protein; ThiamineS-Like Protein
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSAPLQITIKLFAIYQETYGTEVLHWQVAPGSTVMDVFQRILSEHPSLAEWQAVTRFGVNLEFVSPETVLQEGDEVVLIP PVSGG
Sequences:
>Translated_85_residues MSAPLQITIKLFAIYQETYGTEVLHWQVAPGSTVMDVFQRILSEHPSLAEWQAVTRFGVNLEFVSPETVLQEGDEVVLIP PVSGG >Mature_84_residues SAPLQITIKLFAIYQETYGTEVLHWQVAPGSTVMDVFQRILSEHPSLAEWQAVTRFGVNLEFVSPETVLQEGDEVVLIPP VSGG
Specific function: Unknown
COG id: COG1977
COG function: function code H; Molybdopterin converting factor, small subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9400; Mature: 9269
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPLQITIKLFAIYQETYGTEVLHWQVAPGSTVMDVFQRILSEHPSLAEWQAVTRFGVN CCCCCEEEEEEEEEEHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCE LEFVSPETVLQEGDEVVLIPPVSGG EEEECHHHHHHCCCCEEEECCCCCC >Mature Secondary Structure SAPLQITIKLFAIYQETYGTEVLHWQVAPGSTVMDVFQRILSEHPSLAEWQAVTRFGVN CCCCEEEEEEEEEEHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCE LEFVSPETVLQEGDEVVLIPPVSGG EEEECHHHHHHCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA