| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is yuxG [H]
Identifier: 170079184
GI number: 170079184
Start: 2711031
End: 2713004
Strand: Reverse
Name: yuxG [H]
Synonym: SYNPCC7002_A2590
Alternate gene names: 170079184
Gene position: 2713004-2711031 (Counterclockwise)
Preceding gene: 170079185
Following gene: 170079182
Centisome position: 90.19
GC content: 53.34
Gene sequence:
>1974_bases ATGAAAAGCCTTTGGAACGATCAAGAAGCAGCCACCTACCAGGGGGATTTGGCCCTGCGGGTTTACACATCGCGTTTGTT AGGGCGAGATCCCTCTTTGGTACTCCATGGCGGTGGTAATACCTCTGTCAAGGTCACGGAAACGAACCTCGTCGGGGAAA CGGAAGAAATTCTCTATGTCAAAGGAAGCGGCTGGGACTTGGCGACCATCGAGGCGGCGGGTTTTGCCCCCGTGCGGATG AATCATTTGCTGAAATTGGCTCAATTGCCAAGCCTAAGCGACCCCCAGATGGTCAACGAACTAAAGACCCAAATGACTGT CGCCACGGCCCCGACCCCTTCGGTGGAAACGATTTTACACGCGATTTTGCCCTACAAATATGTCGATCACACCCACGCCG ACGCAATTGTGACGATTACCAACACACCGGAGGGCCTGGAGCGAATCAAAGAAATTTATGGCGATCGCCTGGTGATTATT CCCTATATCATGCCGGGGTTTGACCTCGCTCGCCTTTGTGCCGAAAAATTTGCCGCCGCCGCCCACGCCCAAACCGAGGG GATGATTTTGTTAAACCACGGGATTTTCTCCTTTGGGGCGACGGCCAAAGAATCCTACGAGCGGATGATTGCCCTTGTCC AGGAAGCAGAAACCTATCTCCAGCAGCAAGGGGCTTGGCAGATTCCCCAACGTTCTGTAAAAACCAGTGACACTCCCATC GCGAAAACCCTAGCCCAACTCCGTTACGACGTTTCCCAGGTGGCAGGTTTCCCGGTCATTCTCAAAGGCGATCGCCGCCC GGAAATTTTGAACTTTACCCAGCGGGAAGACTTAGGGCGCATTTCCCAACAAAATCCCGCCACCCCCGACCATGTAATCC GCACCAAACCTGTGCCACTGATTGGCCGTGATGTGCAAGGGTTCGCCGCCGCTTACAAAGCCTATTTCACCAACCAAGCG CCCGAAGCCAAGGAACCCAAAACCATGCTTGATCCGGCCCCCAGGGTAATTCTCGATCCGGAATTGGGTTTAATTACCGT CGGCCAAACCGCCAAAGCCGCAAACATTGTCGCAGATATCTATCGCCACACCATCGAGATTATTACCCGTGCTGAACGGC TCAGTCGCTACCAAGCCCTGTCCCAAAAAGATATTTTTGATATGGAATATTGGGATCTAGAGCAGGCCAAACTGAAAAAA GGGGGCAATCCACCAGAATTTACCGGCGAGATTGCCCTGGTGACAGGGGCCGCCTCTGGCATTGGTAAAGCCTGCGTTGA ATCTCTCCTGAAGCGAGGGGCGGCGGTGGTGGCCCTGGATATTAACCCCACCATTGAAACCTTATGCGATCGCCCTGATT TTCTTGGCCTGACCTGTGACCTGACGGACGAAACCCAAATTAAAAACGCCTTAGAGCAAGCAGTCCAATATTTTGGTGGT TTGGACATGGTAATTCTTAACGCCGGGATTTTCCCCCCCAGCCAGGCGATCGCCAATCTCCCCACCGACCACTGGCGACA GGTACTCGACATTAATCTCGACAGCAATTTGGTTCTGCTGCGGGAATGTCATCCTTTCCTGAAACTGGCACCGAAAGGGG GGCGGGTCGCGATCATTGGCTCGAAAAATGTTGCTGCCCCAGGTCAAGGCGTCGCTGCCTATTCCGTTTCCAAAGCGGCC CTCAACCAACTGGCACGGGTGGCCGCCCTCGAATGGGGTTCAGACGAGATTCGGATCAATACCATCCATCCCAATGCCGT CTTCGATACAGGGATTTGGACGCCCGAAGTGCTCGAAAAACGCGCCAAAGCCTACGGCCTAACCATTGAGGATTACAAGA AAAACAATCTCCTTCAGGTGGAAATCACTAGCCAGGACGTCGCTGAATGTGCCGTAATCCTTTGCAGTGATCTATTCGCT AAAACAACCGCCGCCCAAATTCCCCTTGATGGCGGCAACGAGCGCGTCATTTAA
Upstream 100 bases:
>100_bases GATCTCACCTGGCAACGGCAACGCCTAGCGCCGTAAAGTTTAGCTTTGCCACCCGAAGCGGCCTAAGATTTGTACTGTGT AATTTAGCGGAACTCAGTAC
Downstream 100 bases:
>100_bases CAAAAATCCCCCTTTGAAAGGGGGAGCTAGGGGGATGTCACTTCCGAAGGGGGAGCTAGGGGGATGTTATTTACATAATG CCAACAAAATGGAGCGGGCC
Product: short chain dehydrogenase
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 657; Mature: 657
Protein sequence:
>657_residues MKSLWNDQEAATYQGDLALRVYTSRLLGRDPSLVLHGGGNTSVKVTETNLVGETEEILYVKGSGWDLATIEAAGFAPVRM NHLLKLAQLPSLSDPQMVNELKTQMTVATAPTPSVETILHAILPYKYVDHTHADAIVTITNTPEGLERIKEIYGDRLVII PYIMPGFDLARLCAEKFAAAAHAQTEGMILLNHGIFSFGATAKESYERMIALVQEAETYLQQQGAWQIPQRSVKTSDTPI AKTLAQLRYDVSQVAGFPVILKGDRRPEILNFTQREDLGRISQQNPATPDHVIRTKPVPLIGRDVQGFAAAYKAYFTNQA PEAKEPKTMLDPAPRVILDPELGLITVGQTAKAANIVADIYRHTIEIITRAERLSRYQALSQKDIFDMEYWDLEQAKLKK GGNPPEFTGEIALVTGAASGIGKACVESLLKRGAAVVALDINPTIETLCDRPDFLGLTCDLTDETQIKNALEQAVQYFGG LDMVILNAGIFPPSQAIANLPTDHWRQVLDINLDSNLVLLRECHPFLKLAPKGGRVAIIGSKNVAAPGQGVAAYSVSKAA LNQLARVAALEWGSDEIRINTIHPNAVFDTGIWTPEVLEKRAKAYGLTIEDYKKNNLLQVEITSQDVAECAVILCSDLFA KTTAAQIPLDGGNERVI
Sequences:
>Translated_657_residues MKSLWNDQEAATYQGDLALRVYTSRLLGRDPSLVLHGGGNTSVKVTETNLVGETEEILYVKGSGWDLATIEAAGFAPVRM NHLLKLAQLPSLSDPQMVNELKTQMTVATAPTPSVETILHAILPYKYVDHTHADAIVTITNTPEGLERIKEIYGDRLVII PYIMPGFDLARLCAEKFAAAAHAQTEGMILLNHGIFSFGATAKESYERMIALVQEAETYLQQQGAWQIPQRSVKTSDTPI AKTLAQLRYDVSQVAGFPVILKGDRRPEILNFTQREDLGRISQQNPATPDHVIRTKPVPLIGRDVQGFAAAYKAYFTNQA PEAKEPKTMLDPAPRVILDPELGLITVGQTAKAANIVADIYRHTIEIITRAERLSRYQALSQKDIFDMEYWDLEQAKLKK GGNPPEFTGEIALVTGAASGIGKACVESLLKRGAAVVALDINPTIETLCDRPDFLGLTCDLTDETQIKNALEQAVQYFGG LDMVILNAGIFPPSQAIANLPTDHWRQVLDINLDSNLVLLRECHPFLKLAPKGGRVAIIGSKNVAAPGQGVAAYSVSKAA LNQLARVAALEWGSDEIRINTIHPNAVFDTGIWTPEVLEKRAKAYGLTIEDYKKNNLLQVEITSQDVAECAVILCSDLFA KTTAAQIPLDGGNERVI >Mature_657_residues MKSLWNDQEAATYQGDLALRVYTSRLLGRDPSLVLHGGGNTSVKVTETNLVGETEEILYVKGSGWDLATIEAAGFAPVRM NHLLKLAQLPSLSDPQMVNELKTQMTVATAPTPSVETILHAILPYKYVDHTHADAIVTITNTPEGLERIKEIYGDRLVII PYIMPGFDLARLCAEKFAAAAHAQTEGMILLNHGIFSFGATAKESYERMIALVQEAETYLQQQGAWQIPQRSVKTSDTPI AKTLAQLRYDVSQVAGFPVILKGDRRPEILNFTQREDLGRISQQNPATPDHVIRTKPVPLIGRDVQGFAAAYKAYFTNQA PEAKEPKTMLDPAPRVILDPELGLITVGQTAKAANIVADIYRHTIEIITRAERLSRYQALSQKDIFDMEYWDLEQAKLKK GGNPPEFTGEIALVTGAASGIGKACVESLLKRGAAVVALDINPTIETLCDRPDFLGLTCDLTDETQIKNALEQAVQYFGG LDMVILNAGIFPPSQAIANLPTDHWRQVLDINLDSNLVLLRECHPFLKLAPKGGRVAIIGSKNVAAPGQGVAAYSVSKAA LNQLARVAALEWGSDEIRINTIHPNAVFDTGIWTPEVLEKRAKAYGLTIEDYKKNNLLQVEITSQDVAECAVILCSDLFA KTTAAQIPLDGGNERVI
Specific function: Unknown
COG id: COG3347
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=252, Percent_Identity=26.5873015873016, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI5031737, Length=259, Percent_Identity=26.2548262548263, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI19923817, Length=218, Percent_Identity=26.1467889908257, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI33667109, Length=187, Percent_Identity=27.807486631016, Blast_Score=73, Evalue=1e-12, Organism=Homo sapiens, GI59889578, Length=173, Percent_Identity=30.0578034682081, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI31542939, Length=195, Percent_Identity=31.2820512820513, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI126723191, Length=183, Percent_Identity=27.8688524590164, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI4504505, Length=199, Percent_Identity=28.643216080402, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI224922801, Length=116, Percent_Identity=34.4827586206897, Blast_Score=67, Evalue=6e-11, Organism=Escherichia coli, GI1787335, Length=256, Percent_Identity=29.296875, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI87082100, Length=190, Percent_Identity=31.0526315789474, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=27.6679841897233, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI1789208, Length=180, Percent_Identity=28.8888888888889, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1789378, Length=193, Percent_Identity=31.0880829015544, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI2367365, Length=186, Percent_Identity=32.258064516129, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1788459, Length=256, Percent_Identity=25, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1787905, Length=255, Percent_Identity=27.843137254902, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI2367175, Length=255, Percent_Identity=27.0588235294118, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17561402, Length=193, Percent_Identity=29.0155440414508, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560332, Length=215, Percent_Identity=29.3023255813954, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17560676, Length=187, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=27.0916334661355, Blast_Score=73, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17562906, Length=229, Percent_Identity=28.3842794759825, Blast_Score=73, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17562908, Length=195, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=26.1904761904762, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17551412, Length=226, Percent_Identity=26.9911504424779, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17544670, Length=276, Percent_Identity=27.536231884058, Blast_Score=70, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17538182, Length=209, Percent_Identity=30.622009569378, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17563726, Length=211, Percent_Identity=26.5402843601896, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193204405, Length=218, Percent_Identity=27.0642201834862, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17538480, Length=197, Percent_Identity=28.4263959390863, Blast_Score=66, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322227, Length=219, Percent_Identity=28.7671232876712, Blast_Score=93, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6322226, Length=170, Percent_Identity=30.5882352941176, Blast_Score=72, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6324126, Length=265, Percent_Identity=29.4339622641509, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI23397609, Length=260, Percent_Identity=29.6153846153846, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI21357041, Length=259, Percent_Identity=27.7992277992278, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24644339, Length=258, Percent_Identity=27.5193798449612, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI21355319, Length=204, Percent_Identity=26.4705882352941, Blast_Score=76, Evalue=7e-14, Organism=Drosophila melanogaster, GI28571526, Length=255, Percent_Identity=27.0588235294118, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI17737361, Length=196, Percent_Identity=33.6734693877551, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24663911, Length=219, Percent_Identity=25.1141552511416, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001303 - InterPro: IPR013454 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short; PF00596 Aldolase_II [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 71834; Mature: 71834
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLWNDQEAATYQGDLALRVYTSRLLGRDPSLVLHGGGNTSVKVTETNLVGETEEILYV CCCCCCCCCCCEECCCEEEEEEHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEE KGSGWDLATIEAAGFAPVRMNHLLKLAQLPSLSDPQMVNELKTQMTVATAPTPSVETILH ECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCCCHHHHHHH AILPYKYVDHTHADAIVTITNTPEGLERIKEIYGDRLVIIPYIMPGFDLARLCAEKFAAA HHHCHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHH AHAQTEGMILLNHGIFSFGATAKESYERMIALVQEAETYLQQQGAWQIPQRSVKTSDTPI HHCCCCCEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH AKTLAQLRYDVSQVAGFPVILKGDRRPEILNFTQREDLGRISQQNPATPDHVIRTKPVPL HHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCCE IGRDVQGFAAAYKAYFTNQAPEAKEPKTMLDPAPRVILDPELGLITVGQTAKAANIVADI ECCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCEEECCCCCEEECCCCHHHHHHHHHH YRHTIEIITRAERLSRYQALSQKDIFDMEYWDLEQAKLKKGGNPPEFTGEIALVTGAASG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHCCCCCCCCCCCEEEEECCCCC IGKACVESLLKRGAAVVALDINPTIETLCDRPDFLGLTCDLTDETQIKNALEQAVQYFGG HHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC LDMVILNAGIFPPSQAIANLPTDHWRQVLDINLDSNLVLLRECHPFLKLAPKGGRVAIIG CEEEEEECCCCCCHHHHHCCCHHHHHHEEEECCCCCEEEEECCCHHHEECCCCCEEEEEE SKNVAAPGQGVAAYSVSKAALNQLARVAALEWGSDEIRINTIHPNAVFDTGIWTPEVLEK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCHHHHHH RAKAYGLTIEDYKKNNLLQVEITSQDVAECAVILCSDLFAKTTAAQIPLDGGNERVI HHHHHCCCHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKSLWNDQEAATYQGDLALRVYTSRLLGRDPSLVLHGGGNTSVKVTETNLVGETEEILYV CCCCCCCCCCCEECCCEEEEEEHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEE KGSGWDLATIEAAGFAPVRMNHLLKLAQLPSLSDPQMVNELKTQMTVATAPTPSVETILH ECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCCCHHHHHHH AILPYKYVDHTHADAIVTITNTPEGLERIKEIYGDRLVIIPYIMPGFDLARLCAEKFAAA HHHCHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHH AHAQTEGMILLNHGIFSFGATAKESYERMIALVQEAETYLQQQGAWQIPQRSVKTSDTPI HHCCCCCEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH AKTLAQLRYDVSQVAGFPVILKGDRRPEILNFTQREDLGRISQQNPATPDHVIRTKPVPL HHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCCE IGRDVQGFAAAYKAYFTNQAPEAKEPKTMLDPAPRVILDPELGLITVGQTAKAANIVADI ECCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCEEECCCCCEEECCCCHHHHHHHHHH YRHTIEIITRAERLSRYQALSQKDIFDMEYWDLEQAKLKKGGNPPEFTGEIALVTGAASG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHCCCCCCCCCCCEEEEECCCCC IGKACVESLLKRGAAVVALDINPTIETLCDRPDFLGLTCDLTDETQIKNALEQAVQYFGG HHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC LDMVILNAGIFPPSQAIANLPTDHWRQVLDINLDSNLVLLRECHPFLKLAPKGGRVAIIG CEEEEEECCCCCCHHHHHCCCHHHHHHEEEECCCCCEEEEECCCHHHEECCCCCEEEEEE SKNVAAPGQGVAAYSVSKAALNQLARVAALEWGSDEIRINTIHPNAVFDTGIWTPEVLEK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCHHHHHH RAKAYGLTIEDYKKNNLLQVEITSQDVAECAVILCSDLFAKTTAAQIPLDGGNERVI HHHHHCCCHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377; 8188684 [H]