Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170079176

Identifier: 170079176

GI number: 170079176

Start: 2702040

End: 2702498

Strand: Direct

Name: 170079176

Synonym: SYNPCC7002_A2582

Alternate gene names: NA

Gene position: 2702040-2702498 (Clockwise)

Preceding gene: 170079175

Following gene: 170079178

Centisome position: 89.83

GC content: 46.19

Gene sequence:

>459_bases
ATGCTCAAGCTCTTTAAACGCTACGAAAAACTAATGATTCAAGTTCTGCTGGCGATGATGGCGATCGCCATTGGCTTAGC
AACCCTGGATTTTGGCTGGTTCCTGTTCCAAAGTATCGCCGCCCCCCCGATACTGTTGTTAAACGCCGACCAACTGCTAG
AAGTTTTTAGTCTCTTTATGCTGATCATTATCGGCATCGAACTTTTAGAGAGCATTATCAATACCTATCTTTCTAAGGGA
CGCCCCCATTTTGAAGTGGTTTTATCCGTCGCCATTATTGCGATCGCCCGGAAGGTAATTATTCTAGACATCAAAACCAC
CGATAGCGTGAGTTTATTTGGCATTGCCGCAATTATTCTTTCCCTGACGGTGGGCTATTACTTCATGAAACAAAGCCACC
CCGAAGATGGATATTCCCCCGACCTAGATCCGACCAAAGACCAGAAACCGCCCCAGTAG

Upstream 100 bases:

>100_bases
TGGCGTCACCCTGGCCTATTTTTCCTAAGAAGGCCGCATACTACAATATTTCCCTGGGAATCCTTTTGTACCAGAACACC
ACTCTAGCCCCAGGGACTCA

Downstream 100 bases:

>100_bases
CGTTCTCAAACATTGAACACGGAGCGGTAATTGACGTTATTTAATTATTTGATTCACAACTAGATTAGCCGGACAAACTA
TAGACCGTTGGCCTGGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MLKLFKRYEKLMIQVLLAMMAIAIGLATLDFGWFLFQSIAAPPILLLNADQLLEVFSLFMLIIIGIELLESIINTYLSKG
RPHFEVVLSVAIIAIARKVIILDIKTTDSVSLFGIAAIILSLTVGYYFMKQSHPEDGYSPDLDPTKDQKPPQ

Sequences:

>Translated_152_residues
MLKLFKRYEKLMIQVLLAMMAIAIGLATLDFGWFLFQSIAAPPILLLNADQLLEVFSLFMLIIIGIELLESIINTYLSKG
RPHFEVVLSVAIIAIARKVIILDIKTTDSVSLFGIAAIILSLTVGYYFMKQSHPEDGYSPDLDPTKDQKPPQ
>Mature_152_residues
MLKLFKRYEKLMIQVLLAMMAIAIGLATLDFGWFLFQSIAAPPILLLNADQLLEVFSLFMLIIIGIELLESIINTYLSKG
RPHFEVVLSVAIIAIARKVIILDIKTTDSVSLFGIAAIILSLTVGYYFMKQSHPEDGYSPDLDPTKDQKPPQ

Specific function: Unknown

COG id: COG3431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17000; Mature: 17000

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLFKRYEKLMIQVLLAMMAIAIGLATLDFGWFLFQSIAAPPILLLNADQLLEVFSLFM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHH
LIIIGIELLESIINTYLSKGRPHFEVVLSVAIIAIARKVIILDIKTTDSVSLFGIAAIIL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHH
SLTVGYYFMKQSHPEDGYSPDLDPTKDQKPPQ
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKLFKRYEKLMIQVLLAMMAIAIGLATLDFGWFLFQSIAAPPILLLNADQLLEVFSLFM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHH
LIIIGIELLESIINTYLSKGRPHFEVVLSVAIIAIARKVIILDIKTTDSVSLFGIAAIIL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHH
SLTVGYYFMKQSHPEDGYSPDLDPTKDQKPPQ
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA