| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170079173
Identifier: 170079173
GI number: 170079173
Start: 2697075
End: 2697434
Strand: Reverse
Name: 170079173
Synonym: SYNPCC7002_A2579
Alternate gene names: NA
Gene position: 2697434-2697075 (Counterclockwise)
Preceding gene: 170079177
Following gene: 170079170
Centisome position: 89.67
GC content: 48.89
Gene sequence:
>360_bases ATGAACTTTGCAAAAATCGCTGCTGTTGCTGCTGGTGCTGCCGCTCTCTCTTTAGGCTTTGCCTCTTCCGCAAAGGCTGA ATTCGCTGCTTCCGTCTCCTTCGTAGACATCGACACCACTGCTAACGGTATCTTTAGCTCTGACATCACTGGCTTTTCTG GCTCCGTTGCCTTTGGTGATGGCTATGCTGCTGCTGCAACTGGTGCTGCTGCCCTTCAGGTTCCTTTCGGTCCCGATGTC GTACTGACCTCTGGTTATGCCCTAGGTAATGACGATACTTCTGTATTTATCGAAGTTAACGAAATCAACCCCTTCGATGG TGAAGAAGAAGTCATCGAATTCACTATTGGTGACGACTAA
Upstream 100 bases:
>100_bases TGAGAAGTGGGGTATATTTACTAAAGTAAGGGGTTATATATTCTAAGTATAATCTCCATCCAATTACACATTCAAAATTT TGATTATTGGAGAAACAAAA
Downstream 100 bases:
>100_bases TACTGTTTAGGTATTTAGTTCGATAATCTATTTTTCAAAGGCTTAGATATTAAATATTATTCTAGGCCTTCTTTTTATGG CTTGATGAATTCGTTTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MNFAKIAAVAAGAAALSLGFASSAKAEFAASVSFVDIDTTANGIFSSDITGFSGSVAFGDGYAAAATGAAALQVPFGPDV VLTSGYALGNDDTSVFIEVNEINPFDGEEEVIEFTIGDD
Sequences:
>Translated_119_residues MNFAKIAAVAAGAAALSLGFASSAKAEFAASVSFVDIDTTANGIFSSDITGFSGSVAFGDGYAAAATGAAALQVPFGPDV VLTSGYALGNDDTSVFIEVNEINPFDGEEEVIEFTIGDD >Mature_119_residues MNFAKIAAVAAGAAALSLGFASSAKAEFAASVSFVDIDTTANGIFSSDITGFSGSVAFGDGYAAAATGAAALQVPFGPDV VLTSGYALGNDDTSVFIEVNEINPFDGEEEVIEFTIGDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11900; Mature: 11900
Theoretical pI: Translated: 3.25; Mature: 3.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFAKIAAVAAGAAALSLGFASSAKAEFAASVSFVDIDTTANGIFSSDITGFSGSVAFGD CCHHHHHHHHCCCHHEEECCCCCCCCCEEEEEEEEEECCCCCCEECCCCCCCCCEEEECC GYAAAATGAAALQVPFGPDVVLTSGYALGNDDTSVFIEVNEINPFDGEEEVIEFTIGDD CCCCCCCCCEEEECCCCCCEEEECCEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCC >Mature Secondary Structure MNFAKIAAVAAGAAALSLGFASSAKAEFAASVSFVDIDTTANGIFSSDITGFSGSVAFGD CCHHHHHHHHCCCHHEEECCCCCCCCCEEEEEEEEEECCCCCCEECCCCCCCCCEEEECC GYAAAATGAAALQVPFGPDVVLTSGYALGNDDTSVFIEVNEINPFDGEEEVIEFTIGDD CCCCCCCCCEEEECCCCCCEEEECCEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA