| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079151
Identifier: 170079151
GI number: 170079151
Start: 2665756
End: 2667180
Strand: Reverse
Name: 170079151
Synonym: SYNPCC7002_A2557
Alternate gene names: NA
Gene position: 2667180-2665756 (Counterclockwise)
Preceding gene: 170079152
Following gene: 170079150
Centisome position: 88.67
GC content: 52.91
Gene sequence:
>1425_bases ATGACCTTTCTCGACAATCTCAAAAAACCCACCCTCTTCGGCCATGCTGTCACCCCAGAGTTGTTTGCCCTGCTGACGGT CTATTTCGTCCAGGGGATTCTCAATCTCTCGCGGCTTGCGGTGAGCTTTTTCCTCAAAGACGATCTCGGCCTAACCCCGG CAGAAGTGGCAGCCCTCACGGGACTTGCGGCATTTCCCTGGGTCGTCAAGCCCCTTTTTGGCTTTTTGTCGGATGGCTTT CCGATCTTTGGGTATCGACGACGCTCTTACCTAATTTTGGCGGGTTTACTCGGTTGTGGCGCTTGGGCAGCAATGGCCAC CATTGTCCAAGCACCCTGGTTGGCGGCAACGATGATTGTCTTGAGTTCCATCTCTGTGGCGATTAGTGATGTGATTGTCG ATTCGGTGGTGGTCGAACGCGCCCGGGCCGAATCTTTGGATAAAGTAGGGTCACTCCAGTCCTTGACCTGGGCCGTGGCG GCGGTGGGGAGTTTAACAACGGCCTATTTGAGCGGTTGGTTACTGGAACAATTTAGTACCAGGGTTGTGTTTGGGATTAC GGCCATTTTTCCGCTGTTGGTATCGGCGATCGCCTTGTTAATTATTGAGCAACCCCGTGAAGCCATATCCCTAAAAGCCA CCACCGATAACATTGGCAACCAGATGAAAACCCTCTGGGGAGCAGTACGGCAGAAAAAAATTCTGTTGCCCACGGCCTTT GTTTTCCTCTGGCAGGCCACCCCCAGTGCCGATTCTGCCTTTTTCTTTTTTGTCACCAATGAGCTAGACTTTAACCCGGA ATTTTTAGGGCGGGTGCGCCTAGTCACTAGCTTTGCGGCCCTGGCGGGGATTGCCATCTACCAAAAATATCTCAAGCAAG TTTCGTTCCGGAAAATGTTGGGGTGGAGTACCGTCATTTCCGCCGTCCTTGGTTTTACCACCCTTATTCTTGTGACCCAC GCCAACCGTGCTTTGGGCATTGATGATCGCTGGTTTAGCTTGGGGGACAACTTGATTTTGACCGTTACTGGCGAAATTGC CCTGATGCCCATTCTGGTGTTGTCAGCGCGCCTTTGTCCGCCCGGCGTCGAGGCGACCATGTTTGCCCTGTTAATGTCGA GTTGGAACCTGGCGGGTTTACTCTCCCATGAGTTGGGGGCTCTTCTCACCCAGTGGCTCGGAGTGACAGAAACCAATTTT GACCGACTTTGGCTTTTGGTCACGATCACGAATTTGACGACCCTATTGCCCCTCGTCTTCTTGAAATGGCTCCCGGCAGG GGATCCCCAGGCTGATCTTGAAGAACACACCACGCCCTCAGTGGAACTTTACGAACACCACGCGGCGATTTCGGGAACAG AATCGGCCCTTTTCCCGACGGTAGAACCGAATTTGGTGGGTTCCCAGTCGGAAAAACAGTCTTAA
Upstream 100 bases:
>100_bases ATTTAATCCCTTAGGGTGTGGTTTACGCTAAACAGATTTCAGAAAAGGTTGTCTATACTGAGAAAAGACTTTACAAAACT TCATCATAAGCGTTCCCTTG
Downstream 100 bases:
>100_bases AATGTCATGCCAGCAGTGGTACAGGTCAAAAATCTGTGAAACAAAAGTGCGCAGACTAAAGACTAGACTTACAATGGTTT GTCAACATGATCTTTTTTGT
Product: integral membrane protein
Products: NA
Alternate protein names: Folate-Biopterin Transporter Family Protein; Folate/Biopterin Transporter Subfamily; Integral Membrane Protein; Biopterin Transport-Related; Biopterin Transport-Related -Like Protein
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MTFLDNLKKPTLFGHAVTPELFALLTVYFVQGILNLSRLAVSFFLKDDLGLTPAEVAALTGLAAFPWVVKPLFGFLSDGF PIFGYRRRSYLILAGLLGCGAWAAMATIVQAPWLAATMIVLSSISVAISDVIVDSVVVERARAESLDKVGSLQSLTWAVA AVGSLTTAYLSGWLLEQFSTRVVFGITAIFPLLVSAIALLIIEQPREAISLKATTDNIGNQMKTLWGAVRQKKILLPTAF VFLWQATPSADSAFFFFVTNELDFNPEFLGRVRLVTSFAALAGIAIYQKYLKQVSFRKMLGWSTVISAVLGFTTLILVTH ANRALGIDDRWFSLGDNLILTVTGEIALMPILVLSARLCPPGVEATMFALLMSSWNLAGLLSHELGALLTQWLGVTETNF DRLWLLVTITNLTTLLPLVFLKWLPAGDPQADLEEHTTPSVELYEHHAAISGTESALFPTVEPNLVGSQSEKQS
Sequences:
>Translated_474_residues MTFLDNLKKPTLFGHAVTPELFALLTVYFVQGILNLSRLAVSFFLKDDLGLTPAEVAALTGLAAFPWVVKPLFGFLSDGF PIFGYRRRSYLILAGLLGCGAWAAMATIVQAPWLAATMIVLSSISVAISDVIVDSVVVERARAESLDKVGSLQSLTWAVA AVGSLTTAYLSGWLLEQFSTRVVFGITAIFPLLVSAIALLIIEQPREAISLKATTDNIGNQMKTLWGAVRQKKILLPTAF VFLWQATPSADSAFFFFVTNELDFNPEFLGRVRLVTSFAALAGIAIYQKYLKQVSFRKMLGWSTVISAVLGFTTLILVTH ANRALGIDDRWFSLGDNLILTVTGEIALMPILVLSARLCPPGVEATMFALLMSSWNLAGLLSHELGALLTQWLGVTETNF DRLWLLVTITNLTTLLPLVFLKWLPAGDPQADLEEHTTPSVELYEHHAAISGTESALFPTVEPNLVGSQSEKQS >Mature_473_residues TFLDNLKKPTLFGHAVTPELFALLTVYFVQGILNLSRLAVSFFLKDDLGLTPAEVAALTGLAAFPWVVKPLFGFLSDGFP IFGYRRRSYLILAGLLGCGAWAAMATIVQAPWLAATMIVLSSISVAISDVIVDSVVVERARAESLDKVGSLQSLTWAVAA VGSLTTAYLSGWLLEQFSTRVVFGITAIFPLLVSAIALLIIEQPREAISLKATTDNIGNQMKTLWGAVRQKKILLPTAFV FLWQATPSADSAFFFFVTNELDFNPEFLGRVRLVTSFAALAGIAIYQKYLKQVSFRKMLGWSTVISAVLGFTTLILVTHA NRALGIDDRWFSLGDNLILTVTGEIALMPILVLSARLCPPGVEATMFALLMSSWNLAGLLSHELGALLTQWLGVTETNFD RLWLLVTITNLTTLLPLVFLKWLPAGDPQADLEEHTTPSVELYEHHAAISGTESALFPTVEPNLVGSQSEKQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51656; Mature: 51525
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLDNLKKPTLFGHAVTPELFALLTVYFVQGILNLSRLAVSFFLKDDLGLTPAEVAALT CCCHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH GLAAFPWVVKPLFGFLSDGFPIFGYRRRSYLILAGLLGCGAWAAMATIVQAPWLAATMIV HHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH LSSISVAISDVIVDSVVVERARAESLDKVGSLQSLTWAVAAVGSLTTAYLSGWLLEQFST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVVFGITAIFPLLVSAIALLIIEQPREAISLKATTDNIGNQMKTLWGAVRQKKILLPTAF HHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECHHHHHHHHHHHHHHHHHCCEEHHHHH VFLWQATPSADSAFFFFVTNELDFNPEFLGRVRLVTSFAALAGIAIYQKYLKQVSFRKML HHHEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWSTVISAVLGFTTLILVTHANRALGIDDRWFSLGDNLILTVTGEIALMPILVLSARLCP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEECHHHHHHHHHHHHHCCC PGVEATMFALLMSSWNLAGLLSHELGALLTQWLGVTETNFDRLWLLVTITNLTTLLPLVF CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHH LKWLPAGDPQADLEEHTTPSVELYEHHAAISGTESALFPTVEPNLVGSQSEKQS HHHCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TFLDNLKKPTLFGHAVTPELFALLTVYFVQGILNLSRLAVSFFLKDDLGLTPAEVAALT CCHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH GLAAFPWVVKPLFGFLSDGFPIFGYRRRSYLILAGLLGCGAWAAMATIVQAPWLAATMIV HHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH LSSISVAISDVIVDSVVVERARAESLDKVGSLQSLTWAVAAVGSLTTAYLSGWLLEQFST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVVFGITAIFPLLVSAIALLIIEQPREAISLKATTDNIGNQMKTLWGAVRQKKILLPTAF HHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECHHHHHHHHHHHHHHHHHCCEEHHHHH VFLWQATPSADSAFFFFVTNELDFNPEFLGRVRLVTSFAALAGIAIYQKYLKQVSFRKML HHHEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWSTVISAVLGFTTLILVTHANRALGIDDRWFSLGDNLILTVTGEIALMPILVLSARLCP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEECHHHHHHHHHHHHHCCC PGVEATMFALLMSSWNLAGLLSHELGALLTQWLGVTETNFDRLWLLVTITNLTTLLPLVF CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHH LKWLPAGDPQADLEEHTTPSVELYEHHAAISGTESALFPTVEPNLVGSQSEKQS HHHCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA