| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is aroK [H]
Identifier: 170079112
GI number: 170079112
Start: 2627598
End: 2628158
Strand: Reverse
Name: aroK [H]
Synonym: SYNPCC7002_A2517
Alternate gene names: 170079112
Gene position: 2628158-2627598 (Counterclockwise)
Preceding gene: 170079113
Following gene: 170079111
Centisome position: 87.37
GC content: 51.52
Gene sequence:
>561_bases ATGGATGATTTGCTCAAAGGTTTAAATATTTATCTCATCGGCATGATGGGCACGGGGAAAAGCACCCTCGCAGAAATTAT TGCGGAATTGATGAATTACCGCAGTTTGGATTCGGACAGCATCATTGAAACCCTGGCAAAGCAGTCGATCAGTGAGATTT TTGCCGAGATGGGGGAAGCAGAATTTCGCAAACTCGAAACCCAAGTCCTCAAGCAAATCGCGGTACAAACCCGGACGGTG GTAGCGACGGGGGGCGGTATTGTGGTGTCCCAGGCCAATTGGTATTATCTGCGCCAGGGTTTGACCATTTGGCTGGATGT GCCAGTGCCAATCTTGGTAGAACGGCTGCGGAGTGATACATCGCGCCCCCTTTTGCAAAATGTTGATCTTGAGCGCAAAT TAACGCAACTGCTCCAACAGCGGCGATCGCGTTATGCGGAGGCAGATTTACATATCCAAATTCCCGGCAATCGTCCCCCC CGGGCCGTGGCAGAGGACATCATCGCCCAAATTCCTTCGGTGCTGCGGAAACCGCCAGAATTTATTGGCGATCGCCCTTG A
Upstream 100 bases:
>100_bases GTCTGATTTTGGGCAGTTTAATTCCCCTCGGCTCTCGTCGTTAGGGCAGTGGGAAAAAACCCTTTATGATGGTTGTCTGT CGGTTTGGACTCGCTAATCC
Downstream 100 bases:
>100_bases ATTAAGACCCAAACCTAAAAATTCGTTAAAAATGCTAATCGGGAACAAATGGGGCGATCGCCGATCCCGTACAATACCGA CCCATGTCGAGCCACATCAC
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MDDLLKGLNIYLIGMMGTGKSTLAEIIAELMNYRSLDSDSIIETLAKQSISEIFAEMGEAEFRKLETQVLKQIAVQTRTV VATGGGIVVSQANWYYLRQGLTIWLDVPVPILVERLRSDTSRPLLQNVDLERKLTQLLQQRRSRYAEADLHIQIPGNRPP RAVAEDIIAQIPSVLRKPPEFIGDRP
Sequences:
>Translated_186_residues MDDLLKGLNIYLIGMMGTGKSTLAEIIAELMNYRSLDSDSIIETLAKQSISEIFAEMGEAEFRKLETQVLKQIAVQTRTV VATGGGIVVSQANWYYLRQGLTIWLDVPVPILVERLRSDTSRPLLQNVDLERKLTQLLQQRRSRYAEADLHIQIPGNRPP RAVAEDIIAQIPSVLRKPPEFIGDRP >Mature_186_residues MDDLLKGLNIYLIGMMGTGKSTLAEIIAELMNYRSLDSDSIIETLAKQSISEIFAEMGEAEFRKLETQVLKQIAVQTRTV VATGGGIVVSQANWYYLRQGLTIWLDVPVPILVERLRSDTSRPLLQNVDLERKLTQLLQQRRSRYAEADLHIQIPGNRPP RAVAEDIIAQIPSVLRKPPEFIGDRP
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786587, Length=162, Percent_Identity=31.4814814814815, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI87082255, Length=168, Percent_Identity=32.7380952380952, Blast_Score=74, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 20940; Mature: 20940
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDLLKGLNIYLIGMMGTGKSTLAEIIAELMNYRSLDSDSIIETLAKQSISEIFAEMGEA CCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EFRKLETQVLKQIAVQTRTVVATGGGIVVSQANWYYLRQGLTIWLDVPVPILVERLRSDT HHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCHHHHHCCCEEEEECCHHHHHHHHHCCC SRPLLQNVDLERKLTQLLQQRRSRYAEADLHIQIPGNRPPRAVAEDIIAQIPSVLRKPPE CCHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCHH FIGDRP HCCCCC >Mature Secondary Structure MDDLLKGLNIYLIGMMGTGKSTLAEIIAELMNYRSLDSDSIIETLAKQSISEIFAEMGEA CCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EFRKLETQVLKQIAVQTRTVVATGGGIVVSQANWYYLRQGLTIWLDVPVPILVERLRSDT HHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCHHHHHCCCEEEEECCHHHHHHHHHCCC SRPLLQNVDLERKLTQLLQQRRSRYAEADLHIQIPGNRPPRAVAEDIIAQIPSVLRKPPE CCHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCHH FIGDRP HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA