Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170079081

Identifier: 170079081

GI number: 170079081

Start: 2588421

End: 2588618

Strand: Direct

Name: 170079081

Synonym: SYNPCC7002_A2486

Alternate gene names: NA

Gene position: 2588421-2588618 (Clockwise)

Preceding gene: 170079080

Following gene: 170079083

Centisome position: 86.05

GC content: 41.41

Gene sequence:

>198_bases
GTGGCTTCTATTACCCTTGACCTTTCAGATACCCAATTCCAAAAGCTGCAAGATTTAGCAACCATGCATGGGATTGGGAT
TGAAGTTTTACTGAAGGCAAGCCTAGAGGATTGGCTTAATTCTCAAAAAACGGGGTTTGTTGATGCAGCCGATTATGTTC
TCACAAAAAATACTGAGTTGTATCAGCGGTTAGCATAG

Upstream 100 bases:

>100_bases
GATCACCACCATCCATCACTAAGGGAATACTCTCTCGATATCCTTAAATGTTTGGAGTCGATGCTAGACTTAGCACAAAA
ATATCAGGAGGGCGATCGCC

Downstream 100 bases:

>100_bases
TGCGTTTTCTGACGTTAATCGAGGTACTGGCATTACACCACAGAGTCATTGAGCAATCCGGTGGGGCATTTGGCATTCGA
GATTTAGGCTTGTTGGAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MASITLDLSDTQFQKLQDLATMHGIGIEVLLKASLEDWLNSQKTGFVDAADYVLTKNTELYQRLA

Sequences:

>Translated_65_residues
MASITLDLSDTQFQKLQDLATMHGIGIEVLLKASLEDWLNSQKTGFVDAADYVLTKNTELYQRLA
>Mature_64_residues
ASITLDLSDTQFQKLQDLATMHGIGIEVLLKASLEDWLNSQKTGFVDAADYVLTKNTELYQRLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7274; Mature: 7143

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASITLDLSDTQFQKLQDLATMHGIGIEVLLKASLEDWLNSQKTGFVDAADYVLTKNTEL
CCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHH
YQRLA
HHHCC
>Mature Secondary Structure 
ASITLDLSDTQFQKLQDLATMHGIGIEVLLKASLEDWLNSQKTGFVDAADYVLTKNTEL
CEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHH
YQRLA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA