| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079065
Identifier: 170079065
GI number: 170079065
Start: 2574124
End: 2575338
Strand: Reverse
Name: 170079065
Synonym: SYNPCC7002_A2470
Alternate gene names: NA
Gene position: 2575338-2574124 (Counterclockwise)
Preceding gene: 170079075
Following gene: 170079064
Centisome position: 85.61
GC content: 48.4
Gene sequence:
>1215_bases ATGCTGCCCACGGATTTACTCATGCACCGTCGCCAGGGGGAGAGCCTCATCCCGAAATATTTAGCTCCCAACAAGCAGGC GATCGCCTTAGCTGAAACTTTAATTGACTGTTTTCAACGGTGTCAGGGGGAACAGAAAAAAGTCCTCCAGGCGGAACTCC AGGAAATCGAAGGAGATAGCACCGATTTTAAAGTGCAGCGGGGTTTAGCCCACCTGTTGAAAAATCATTTCAGCACCTTT GAAATTGTCAGTCCCCTCGAACCCCAGATGTTGCGGGAAAAGGTGTTTGCCCAGGCCGCTGCAACGATGCCAATTCCCGA ACAACAATTCAAAATCCTGGAGGCGATCGCCACCGAATTAAACAAAGCCCCGGATCAATCCGTCACCCCCGCAGCCGTTG CCACGGGTCTCTATGCCGATTTACCCGAAAATCACATTCTCACGGAGTTTTCGGCTCCCACTCCCCAAACGTTAATCGAC CGCTATAACCTTTCCCAAGTCCAGGGCATTTTTTACAAAGCGAGCCAGCTCATCATCCATGCCCACCGCAATGACCCAGG GGAATACAAACTGCTATTCCGCTACCTGAAGCTTTTTCAACTGATGACCTACATCGAAGGCGATGCGGACACGGGCTTTA CGATCACCATCGATGGCCCCACCAGTTTATTTAAGGCCAGTACCCGCTATGGCTTGGCGATCGCCAAAATGCTTCCGGCC CTGCTCCATGTGAGCAAATGGCAACTAGAGGCCCACCTGCAATACAAAGACACCTACAGCAACACCATGCGCCAGGGACA ATTTAGCCTTGATGACAGTTGTAATCTCGTTAGCCACTATCCTCCCGGTAAACCCTATGACAGCATGCTCGAAGAATCTT TTGTGAAAGGCTGGCAAAAGCTGAAAACCGAATGGCAACTTGAACGGGAAGTTGATTTGATTCCGTTGCCGGGGAGTGTA ATGATTCCCGATTTTCGTCTGGTGCATCCCGATGGCCAGGAATATCTTTTAGAAATTGTCGGTTATTGGCGACCGGAATA TCTTCAGAAAAAATTCGCTCAGATTCGTCGCGCTGAACAACCTAATCTAATCATTGCCATTTCAGACCGTCTCAATCTTC AAAAAGCGGGCGTAAAATTCGACGATTTACCGAACCCAATTATTTGGTTTAAAAACAAACTGCCAGCTAAAAATATTTTG CAAATTATCGCATAA
Upstream 100 bases:
>100_bases AAGTCTGGATTTGACCTGCTTTGGGCGATTTTGCCCGGTTGAATAGGCCATTGGGACGGATTATTCACGCCGACGTTTTG TTACAAATTTTACGATTTTT
Downstream 100 bases:
>100_bases ATGTCTACGTTGCTGACGCAATGAAAATGTCTAAATTTCTGACCTAATGAGCCTCTCAATGAATTATTGTCGCACGCATT GCCCCCAATCATAGAGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MLPTDLLMHRRQGESLIPKYLAPNKQAIALAETLIDCFQRCQGEQKKVLQAELQEIEGDSTDFKVQRGLAHLLKNHFSTF EIVSPLEPQMLREKVFAQAAATMPIPEQQFKILEAIATELNKAPDQSVTPAAVATGLYADLPENHILTEFSAPTPQTLID RYNLSQVQGIFYKASQLIIHAHRNDPGEYKLLFRYLKLFQLMTYIEGDADTGFTITIDGPTSLFKASTRYGLAIAKMLPA LLHVSKWQLEAHLQYKDTYSNTMRQGQFSLDDSCNLVSHYPPGKPYDSMLEESFVKGWQKLKTEWQLEREVDLIPLPGSV MIPDFRLVHPDGQEYLLEIVGYWRPEYLQKKFAQIRRAEQPNLIIAISDRLNLQKAGVKFDDLPNPIIWFKNKLPAKNIL QIIA
Sequences:
>Translated_404_residues MLPTDLLMHRRQGESLIPKYLAPNKQAIALAETLIDCFQRCQGEQKKVLQAELQEIEGDSTDFKVQRGLAHLLKNHFSTF EIVSPLEPQMLREKVFAQAAATMPIPEQQFKILEAIATELNKAPDQSVTPAAVATGLYADLPENHILTEFSAPTPQTLID RYNLSQVQGIFYKASQLIIHAHRNDPGEYKLLFRYLKLFQLMTYIEGDADTGFTITIDGPTSLFKASTRYGLAIAKMLPA LLHVSKWQLEAHLQYKDTYSNTMRQGQFSLDDSCNLVSHYPPGKPYDSMLEESFVKGWQKLKTEWQLEREVDLIPLPGSV MIPDFRLVHPDGQEYLLEIVGYWRPEYLQKKFAQIRRAEQPNLIIAISDRLNLQKAGVKFDDLPNPIIWFKNKLPAKNIL QIIA >Mature_404_residues MLPTDLLMHRRQGESLIPKYLAPNKQAIALAETLIDCFQRCQGEQKKVLQAELQEIEGDSTDFKVQRGLAHLLKNHFSTF EIVSPLEPQMLREKVFAQAAATMPIPEQQFKILEAIATELNKAPDQSVTPAAVATGLYADLPENHILTEFSAPTPQTLID RYNLSQVQGIFYKASQLIIHAHRNDPGEYKLLFRYLKLFQLMTYIEGDADTGFTITIDGPTSLFKASTRYGLAIAKMLPA LLHVSKWQLEAHLQYKDTYSNTMRQGQFSLDDSCNLVSHYPPGKPYDSMLEESFVKGWQKLKTEWQLEREVDLIPLPGSV MIPDFRLVHPDGQEYLLEIVGYWRPEYLQKKFAQIRRAEQPNLIIAISDRLNLQKAGVKFDDLPNPIIWFKNKLPAKNIL QIIA
Specific function: Unknown
COG id: COG3372
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46109; Mature: 46109
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPTDLLMHRRQGESLIPKYLAPNKQAIALAETLIDCFQRCQGEQKKVLQAELQEIEGDS CCCHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC TDFKVQRGLAHLLKNHFSTFEIVSPLEPQMLREKVFAQAAATMPIPEQQFKILEAIATEL CHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH NKAPDQSVTPAAVATGLYADLPENHILTEFSAPTPQTLIDRYNLSQVQGIFYKASQLIIH HCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHCEEEEE AHRNDPGEYKLLFRYLKLFQLMTYIEGDADTGFTITIDGPTSLFKASTRYGLAIAKMLPA ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH LLHVSKWQLEAHLQYKDTYSNTMRQGQFSLDDSCNLVSHYPPGKPYDSMLEESFVKGWQK HHHHHHHHHEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LKTEWQLEREVDLIPLPGSVMIPDFRLVHPDGQEYLLEIVGYWRPEYLQKKFAQIRRAEQ HHHHHHHHCCCCEEECCCCEECCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC PNLIIAISDRLNLQKAGVKFDDLPNPIIWFKNKLPAKNILQIIA CCEEEEECCCCCHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHC >Mature Secondary Structure MLPTDLLMHRRQGESLIPKYLAPNKQAIALAETLIDCFQRCQGEQKKVLQAELQEIEGDS CCCHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC TDFKVQRGLAHLLKNHFSTFEIVSPLEPQMLREKVFAQAAATMPIPEQQFKILEAIATEL CHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH NKAPDQSVTPAAVATGLYADLPENHILTEFSAPTPQTLIDRYNLSQVQGIFYKASQLIIH HCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHCEEEEE AHRNDPGEYKLLFRYLKLFQLMTYIEGDADTGFTITIDGPTSLFKASTRYGLAIAKMLPA ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH LLHVSKWQLEAHLQYKDTYSNTMRQGQFSLDDSCNLVSHYPPGKPYDSMLEESFVKGWQK HHHHHHHHHEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LKTEWQLEREVDLIPLPGSVMIPDFRLVHPDGQEYLLEIVGYWRPEYLQKKFAQIRRAEQ HHHHHHHHCCCCEEECCCCEECCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC PNLIIAISDRLNLQKAGVKFDDLPNPIIWFKNKLPAKNILQIIA CCEEEEECCCCCHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA