Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079054

Identifier: 170079054

GI number: 170079054

Start: 2557569

End: 2558033

Strand: Direct

Name: 170079054

Synonym: SYNPCC7002_A2459

Alternate gene names: NA

Gene position: 2557569-2558033 (Clockwise)

Preceding gene: 170079053

Following gene: 170079057

Centisome position: 85.02

GC content: 47.74

Gene sequence:

>465_bases
ATGGATGCAGAACAGGAAAGAAATTGGGCGATCGCCTGCCATCTGTCGAGCTTGGCTTGGATTGTCTTAGCCTTTGTCGG
CATTGGGGCGATTCCCTTTGTCAATGTGATTGCGCCGGCGGTGGTCTGGTATCTCAAAAAAGAGGAGTCCGAGCTGATCG
ATGCCCACGGAAAGGAATCGGTTAATTTCCAGATTTCGATGACCATTTATGGTTTAGCGGCGGGAATTATTCTTAGTATT
TTGATCATCGCCGGAGTTGTTTTGATGATCCTGTTGGGCATTGGTGGCAGCAATAATCCCTTTGCGGCCCTGGTGGCAAT
TGTGACGGGGATTGGTTTCTTTATCTTTTTGGCGCTGATTGTGGCGATCGCCATTTTCCAGATTGCAGTCGTAATCTTGG
CGGCGACCAAGGTTCAAGAAGGGCAAATGTATCGTTATCCCTTTAATCTCAGACTACTGAAATAG

Upstream 100 bases:

>100_bases
AACATCGTGTCTGTAATCATAGAAGGGAACCTCGAAATTTTATATTAGCATTTTCAATGCTGCTATATATTTAGGGTAGA
TATGGAGGGACTATAAATTT

Downstream 100 bases:

>100_bases
ATAATTTCCATAAAACAGCCCCCCTGGAATGATTGGCCAAGGGGGGTTTTTAATTAAACTTTAGATGCAAAAATTAGCTC
AGTACCCAATGCACAAGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDAEQERNWAIACHLSSLAWIVLAFVGIGAIPFVNVIAPAVVWYLKKEESELIDAHGKESVNFQISMTIYGLAAGIILSI
LIIAGVVLMILLGIGGSNNPFAALVAIVTGIGFFIFLALIVAIAIFQIAVVILAATKVQEGQMYRYPFNLRLLK

Sequences:

>Translated_154_residues
MDAEQERNWAIACHLSSLAWIVLAFVGIGAIPFVNVIAPAVVWYLKKEESELIDAHGKESVNFQISMTIYGLAAGIILSI
LIIAGVVLMILLGIGGSNNPFAALVAIVTGIGFFIFLALIVAIAIFQIAVVILAATKVQEGQMYRYPFNLRLLK
>Mature_154_residues
MDAEQERNWAIACHLSSLAWIVLAFVGIGAIPFVNVIAPAVVWYLKKEESELIDAHGKESVNFQISMTIYGLAAGIILSI
LIIAGVVLMILLGIGGSNNPFAALVAIVTGIGFFIFLALIVAIAIFQIAVVILAATKVQEGQMYRYPFNLRLLK

Specific function: Unknown

COG id: COG3296

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16630; Mature: 16630

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAEQERNWAIACHLSSLAWIVLAFVGIGAIPFVNVIAPAVVWYLKKEESELIDAHGKES
CCCCCCCCEEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VNFQISMTIYGLAAGIILSILIIAGVVLMILLGIGGSNNPFAALVAIVTGIGFFIFLALI
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VAIAIFQIAVVILAATKVQEGQMYRYPFNLRLLK
HHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEC
>Mature Secondary Structure
MDAEQERNWAIACHLSSLAWIVLAFVGIGAIPFVNVIAPAVVWYLKKEESELIDAHGKES
CCCCCCCCEEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VNFQISMTIYGLAAGIILSILIIAGVVLMILLGIGGSNNPFAALVAIVTGIGFFIFLALI
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VAIAIFQIAVVILAATKVQEGQMYRYPFNLRLLK
HHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA