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The map label for this gene is 170079021

Identifier: 170079021

GI number: 170079021

Start: 2520100

End: 2521230

Strand: Direct

Name: 170079021

Synonym: SYNPCC7002_A2426

Alternate gene names: NA

Gene position: 2520100-2521230 (Clockwise)

Preceding gene: 170079016

Following gene: 170079022

Centisome position: 83.78

GC content: 53.93

Gene sequence:

>1131_bases
ATGACCAATTGTTATCGCAAACTTTTGCTTTTTCTTAGCCTCAGCTTAATGATGGGGGCCGGGCAGGTTTCGGCAGCATC
TCTGGTAGGGCCAATTCAAGATCCTTTACTCCCAACCCAGCAGGGCGATCGCCCCTTGAGTGAATCCCAGGCGGCCCAAC
TAACCCAGACAATTATCACCCTAGAGGCTGAGGGGTTCGAGCAATGGGCTGAGGGAAATAAAGAGGCGGCTTTTTCTCGG
TGGTGGCGACAACTGCGGTTACGGCAAGTTTTACCGGATCGCCAAGCCGAAGTGGAAAGCCTAGGACAAATCGGGGCGAT
CGCCTGGGAAGATAACCAAACAGAGCCAGTACAAATCATCACCGAACGTTTGGTGGCCATCGAACAACAAAATTTTCCCC
AAGACTATAATCTCCTGCTGCCCCTGGCCACGGCCTATGAACAAATTCGGGATTCTCAACGGGCGATCGCCCTCTATCGG
CAGCACCTAGAGACCCTCGAAGATCCCTACAAACCAGAAATTTTGCGCCTAATTACCCAATTGGCCCTAGATTGGTTTAA
CACCAACGCCGCCCTCAATGCCCTAGAAGAAATTGCAACCCTCAACGCCCTTACGGACGCAGACCGGGAACAACTCGCCG
CCCTCTATGAACAAACCCAGCAGCCCGAAAAGGCGATCGCCCAGCAACGGCAACTCACCGCTGTTTATTTCCAAGCACAA
AACCTGCCCCGACTGATCCGCACTTACCAACAAATCGCCGAAAATTACAGGCAACTCCAGGATTATCCCCAGGCCGTAAG
CTTTAGCCGCGATGCCTTTACCCTCGCCTGGGAACTGGAGTATTTTGACGCCGCCGAAAGTGCCCTCACCCAGTTGGCGA
CCCTTTACCTGGCCCAAGAGAAAAACGCCTCTGGCCTCCAGGTCTATGAACAACTGATCACCGTCCAGGAAGCGAGCTAT
AACCGCTTTGGGATGATGGAAACCTACCGCACCCTCGGCACCCTCTATGAACAGGCGGGCCGCTACCCCGACGCCCTCGT
TGCGCTCCAAAGGGGATTGGCGATCGCCAAAGAATTGAACCACAATATCAACGACTTCACCCAAGCCATTGCCACCCTGC
CGCTTCAATGA

Upstream 100 bases:

>100_bases
GAGTTTACTGGCGGTTTTCGCAGAGGACATATACTTTTTATGCAGAGGATCGAAACTGTGACGGGAAGCCTTTCTCGCCA
TTGTTAATAGAGTAAACCCC

Downstream 100 bases:

>100_bases
AATCTTTGCTCAAAAATCTTGCCGTTTTAGACCGCTACATCATCGGTGAACTCAATCTAGCCTTTGCGTTTGGCTTGGGG
CTATTTTCTGCCCTGGGAAT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Domain Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Domain-Containing Protein

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MTNCYRKLLLFLSLSLMMGAGQVSAASLVGPIQDPLLPTQQGDRPLSESQAAQLTQTIITLEAEGFEQWAEGNKEAAFSR
WWRQLRLRQVLPDRQAEVESLGQIGAIAWEDNQTEPVQIITERLVAIEQQNFPQDYNLLLPLATAYEQIRDSQRAIALYR
QHLETLEDPYKPEILRLITQLALDWFNTNAALNALEEIATLNALTDADREQLAALYEQTQQPEKAIAQQRQLTAVYFQAQ
NLPRLIRTYQQIAENYRQLQDYPQAVSFSRDAFTLAWELEYFDAAESALTQLATLYLAQEKNASGLQVYEQLITVQEASY
NRFGMMETYRTLGTLYEQAGRYPDALVALQRGLAIAKELNHNINDFTQAIATLPLQ

Sequences:

>Translated_376_residues
MTNCYRKLLLFLSLSLMMGAGQVSAASLVGPIQDPLLPTQQGDRPLSESQAAQLTQTIITLEAEGFEQWAEGNKEAAFSR
WWRQLRLRQVLPDRQAEVESLGQIGAIAWEDNQTEPVQIITERLVAIEQQNFPQDYNLLLPLATAYEQIRDSQRAIALYR
QHLETLEDPYKPEILRLITQLALDWFNTNAALNALEEIATLNALTDADREQLAALYEQTQQPEKAIAQQRQLTAVYFQAQ
NLPRLIRTYQQIAENYRQLQDYPQAVSFSRDAFTLAWELEYFDAAESALTQLATLYLAQEKNASGLQVYEQLITVQEASY
NRFGMMETYRTLGTLYEQAGRYPDALVALQRGLAIAKELNHNINDFTQAIATLPLQ
>Mature_375_residues
TNCYRKLLLFLSLSLMMGAGQVSAASLVGPIQDPLLPTQQGDRPLSESQAAQLTQTIITLEAEGFEQWAEGNKEAAFSRW
WRQLRLRQVLPDRQAEVESLGQIGAIAWEDNQTEPVQIITERLVAIEQQNFPQDYNLLLPLATAYEQIRDSQRAIALYRQ
HLETLEDPYKPEILRLITQLALDWFNTNAALNALEEIATLNALTDADREQLAALYEQTQQPEKAIAQQRQLTAVYFQAQN
LPRLIRTYQQIAENYRQLQDYPQAVSFSRDAFTLAWELEYFDAAESALTQLATLYLAQEKNASGLQVYEQLITVQEASYN
RFGMMETYRTLGTLYEQAGRYPDALVALQRGLAIAKELNHNINDFTQAIATLPLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42781; Mature: 42650

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNCYRKLLLFLSLSLMMGAGQVSAASLVGPIQDPLLPTQQGDRPLSESQAAQLTQTIIT
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
LEAEGFEQWAEGNKEAAFSRWWRQLRLRQVLPDRQAEVESLGQIGAIAWEDNQTEPVQII
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEECCCCCCHHHHH
TERLVAIEQQNFPQDYNLLLPLATAYEQIRDSQRAIALYRQHLETLEDPYKPEILRLITQ
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LALDWFNTNAALNALEEIATLNALTDADREQLAALYEQTQQPEKAIAQQRQLTAVYFQAQ
HHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
NLPRLIRTYQQIAENYRQLQDYPQAVSFSRDAFTLAWELEYFDAAESALTQLATLYLAQE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHC
KNASGLQVYEQLITVQEASYNRFGMMETYRTLGTLYEQAGRYPDALVALQRGLAIAKELN
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
HNINDFTQAIATLPLQ
CCHHHHHHHHHHCCCC
>Mature Secondary Structure 
TNCYRKLLLFLSLSLMMGAGQVSAASLVGPIQDPLLPTQQGDRPLSESQAAQLTQTIIT
CHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
LEAEGFEQWAEGNKEAAFSRWWRQLRLRQVLPDRQAEVESLGQIGAIAWEDNQTEPVQII
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEECCCCCCHHHHH
TERLVAIEQQNFPQDYNLLLPLATAYEQIRDSQRAIALYRQHLETLEDPYKPEILRLITQ
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LALDWFNTNAALNALEEIATLNALTDADREQLAALYEQTQQPEKAIAQQRQLTAVYFQAQ
HHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
NLPRLIRTYQQIAENYRQLQDYPQAVSFSRDAFTLAWELEYFDAAESALTQLATLYLAQE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHC
KNASGLQVYEQLITVQEASYNRFGMMETYRTLGTLYEQAGRYPDALVALQRGLAIAKELN
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
HNINDFTQAIATLPLQ
CCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA