Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079003

Identifier: 170079003

GI number: 170079003

Start: 2493370

End: 2494167

Strand: Direct

Name: 170079003

Synonym: SYNPCC7002_A2408

Alternate gene names: NA

Gene position: 2493370-2494167 (Clockwise)

Preceding gene: 170079002

Following gene: 170079004

Centisome position: 82.89

GC content: 51.75

Gene sequence:

>798_bases
ATGATTGTGAGTCTTTATCACCGATTATTGGGCATGATGTTGGCGATCGCCAGCCAATTTGAGGGCCATGACACCTCGCC
CCTGCTCCTTTCAATGCAGGCCCTGATGAACCAATACAGCGAAACCGGCACACCGGGCAGTTGGCGGCCCCCGTTTACCG
AAGAGCCCTTAGAAAATGCGTTTTTGTTGTTGCCACTGTTGGTATTTTGTCATGAAGATCCCCAGGATTTAGGCGATCGC
CTGGGAAAATTTGACCTGCCCCCGGCGCAGTATCCTATGGTGTTGGATTTGGCTGGGGCCTTGAGTGCTTGTTTCCGAGA
AAAACTCACCCCTGGGACATTCCGTACCCACATCGCGCAACATTCCCCGGTCGGCACACTACTACCATCCCCCTGGACTC
CCCAACAGACCTGGACAAGCTTCAGTCGGACGATTCGAGCCGAAAAACAGCTTGATCAGGCAACGCGACAACTTTTGCTA
ATCTATGGGGCGATCGCCTATGGTAACGGTCGTTGGCCAGAGAGCTTGGCCCTAGTCCAAACAGAATCAAGTATTATCAG
CCTTTGGGTCGCAATTTTCATCGGTATCCTCCGGGGCGATCGCCATTTACCTCTATGCTTACGGCTACATCATGATTTAG
AAGCAATGGAAACCCAAGTCTTACAGTTTTGGAGCCGCTGGTCGGGACTTCCCCCAGAAAATCAGTTACAGTTGGAGCAA
GTACCACTCATTGCGAGTCAGTCCGTTCTCCAATATCGCCCCCAGCTTCAACTTATTTCCCAACGCCACCTTGTTTAG

Upstream 100 bases:

>100_bases
AAATTGCGGAATGGCGTTTGTCCCAGCAAATCCAACGCACCCAGGCCCGGCGGCCAGATCTGTGGGAAGCGTGGCAGGCT
TCCGAGGGGGAGGTTCAAGA

Downstream 100 bases:

>100_bases
CACCCTGCGACCGATTGAATCTTCTGCGCTCGGTGGACGTCTGAATTAATCGCATTTTTTCAATTTGCATATGAATTTTT
GGTCTAATTCCAAACAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MIVSLYHRLLGMMLAIASQFEGHDTSPLLLSMQALMNQYSETGTPGSWRPPFTEEPLENAFLLLPLLVFCHEDPQDLGDR
LGKFDLPPAQYPMVLDLAGALSACFREKLTPGTFRTHIAQHSPVGTLLPSPWTPQQTWTSFSRTIRAEKQLDQATRQLLL
IYGAIAYGNGRWPESLALVQTESSIISLWVAIFIGILRGDRHLPLCLRLHHDLEAMETQVLQFWSRWSGLPPENQLQLEQ
VPLIASQSVLQYRPQLQLISQRHLV

Sequences:

>Translated_265_residues
MIVSLYHRLLGMMLAIASQFEGHDTSPLLLSMQALMNQYSETGTPGSWRPPFTEEPLENAFLLLPLLVFCHEDPQDLGDR
LGKFDLPPAQYPMVLDLAGALSACFREKLTPGTFRTHIAQHSPVGTLLPSPWTPQQTWTSFSRTIRAEKQLDQATRQLLL
IYGAIAYGNGRWPESLALVQTESSIISLWVAIFIGILRGDRHLPLCLRLHHDLEAMETQVLQFWSRWSGLPPENQLQLEQ
VPLIASQSVLQYRPQLQLISQRHLV
>Mature_265_residues
MIVSLYHRLLGMMLAIASQFEGHDTSPLLLSMQALMNQYSETGTPGSWRPPFTEEPLENAFLLLPLLVFCHEDPQDLGDR
LGKFDLPPAQYPMVLDLAGALSACFREKLTPGTFRTHIAQHSPVGTLLPSPWTPQQTWTSFSRTIRAEKQLDQATRQLLL
IYGAIAYGNGRWPESLALVQTESSIISLWVAIFIGILRGDRHLPLCLRLHHDLEAMETQVLQFWSRWSGLPPENQLQLEQ
VPLIASQSVLQYRPQLQLISQRHLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29997; Mature: 29997

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVSLYHRLLGMMLAIASQFEGHDTSPLLLSMQALMNQYSETGTPGSWRPPFTEEPLENA
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
FLLLPLLVFCHEDPQDLGDRLGKFDLPPAQYPMVLDLAGALSACFREKLTPGTFRTHIAQ
HHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
HSPVGTLLPSPWTPQQTWTSFSRTIRAEKQLDQATRQLLLIYGAIAYGNGRWPESLALVQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
TESSIISLWVAIFIGILRGDRHLPLCLRLHHDLEAMETQVLQFWSRWSGLPPENQLQLEQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
VPLIASQSVLQYRPQLQLISQRHLV
HCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVSLYHRLLGMMLAIASQFEGHDTSPLLLSMQALMNQYSETGTPGSWRPPFTEEPLENA
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
FLLLPLLVFCHEDPQDLGDRLGKFDLPPAQYPMVLDLAGALSACFREKLTPGTFRTHIAQ
HHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
HSPVGTLLPSPWTPQQTWTSFSRTIRAEKQLDQATRQLLLIYGAIAYGNGRWPESLALVQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
TESSIISLWVAIFIGILRGDRHLPLCLRLHHDLEAMETQVLQFWSRWSGLPPENQLQLEQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
VPLIASQSVLQYRPQLQLISQRHLV
HCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA