Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078983

Identifier: 170078983

GI number: 170078983

Start: 2467879

End: 2468958

Strand: Reverse

Name: 170078983

Synonym: SYNPCC7002_A2388

Alternate gene names: NA

Gene position: 2468958-2467879 (Counterclockwise)

Preceding gene: 170078986

Following gene: 170078982

Centisome position: 82.08

GC content: 54.54

Gene sequence:

>1080_bases
ATGATTGGACAACCGCAATCTCCAGAATACAAACTCTCCCCTGAAGAAACGGACGCTTTATTCCGGTCACTACTCCACAA
GGAAGGGACTTGGGTCGAGTGGGGCGTCGGTTGCCAACAACTCCAGCAGTCAGGCCATAGCGCCCAGGAAATTTTTGAGC
AGACAGGTTTCCAGACGGCCCAGCAAAATATGATCATTGTGGCGGCCCAGGTGTACCAAAGCATCGCAAGCAGTGGTGTG
CCCGAAGATCTGCTGGCCTATTGCCGTGGCCCCCGTTCTGATGTGCTGTACGAACTACGGATCCTCAGTCATAGTCAAAG
GGCGATCGCCGCCCAGGTGTGCCAGGCCAAAAGCCTTGAATTTGATGGGGCGAAGGAACTGGCCCGGGCAATGCAAGAGT
TTGCCCGCTTACCCCAAATTCCCGATAGCTTCACAGAACACCCTGGAGATGCCGTTGCCTACCAAGCCTGGCGCTCCGCC
AAGCAAAAAAAAGATTTACAAGACCGCACCCGCCTCATCGCCAAGGGGCTAAAGTTTGCCCATTCCGCCACGGCCCGGCA
AAAAATCGAGCAACTCCTCAGTGACCTCACCACCAGCCCCACCAAGGCAGCCCCGCTCCTCCCCCTCTACCGTTACGACG
AAGACACCAATGTTCCCCTGCTAATTCCGGTGGCGGGATCTTTACCGTTAGAAAGCGATCGCCTGTTGAGCGTCCCCCCC
CTCAAGCAAGCGTCTCCTTTTAATCTCGTGACAGTTGCCACAGCGACAAGTCTGGTGCCGCTACCCAGTTGGCAAAATGT
ACTGACGGCGGGAGATCCGGTGGTGATCTTCCACCAAACTGATCAACTGCCCCAGCCCATCCCCGGTAAGCCGGAACCTG
TTTTAATTTTGCTGGATCGTCAACAAACCACCTGGAATGACAACAGCTATTTTGCGGTAGATGCCGACGGCAAGGTGGAA
TTGGGTTGGTTTGCCGAAGCACCGATCGCCAAAATTTTAGGCCAAGTCCTCTTGGTGATGCGCCCGAAAAAAATTCTCGA
TGAGAATAACCTTCGGGAACCCTGGCAAATGGACGATTAA

Upstream 100 bases:

>100_bases
GGAAGGATCGGTTTAGAACAGTCTCGCTTTATGATTAAGTTTATCGGGCAAATACTGATTTACCTATCATTTTACGTTAT
TCCACTTTTGATTCGGCTTT

Downstream 100 bases:

>100_bases
GCGCAAAAAATGCTGCTTTTACCCGAATTTTTCTCTATTTAACGCCAAAATTTTTATCTAGAAATTTCTCCTAACGGTGT
ACTAGATAGCATTACTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MIGQPQSPEYKLSPEETDALFRSLLHKEGTWVEWGVGCQQLQQSGHSAQEIFEQTGFQTAQQNMIIVAAQVYQSIASSGV
PEDLLAYCRGPRSDVLYELRILSHSQRAIAAQVCQAKSLEFDGAKELARAMQEFARLPQIPDSFTEHPGDAVAYQAWRSA
KQKKDLQDRTRLIAKGLKFAHSATARQKIEQLLSDLTTSPTKAAPLLPLYRYDEDTNVPLLIPVAGSLPLESDRLLSVPP
LKQASPFNLVTVATATSLVPLPSWQNVLTAGDPVVIFHQTDQLPQPIPGKPEPVLILLDRQQTTWNDNSYFAVDADGKVE
LGWFAEAPIAKILGQVLLVMRPKKILDENNLREPWQMDD

Sequences:

>Translated_359_residues
MIGQPQSPEYKLSPEETDALFRSLLHKEGTWVEWGVGCQQLQQSGHSAQEIFEQTGFQTAQQNMIIVAAQVYQSIASSGV
PEDLLAYCRGPRSDVLYELRILSHSQRAIAAQVCQAKSLEFDGAKELARAMQEFARLPQIPDSFTEHPGDAVAYQAWRSA
KQKKDLQDRTRLIAKGLKFAHSATARQKIEQLLSDLTTSPTKAAPLLPLYRYDEDTNVPLLIPVAGSLPLESDRLLSVPP
LKQASPFNLVTVATATSLVPLPSWQNVLTAGDPVVIFHQTDQLPQPIPGKPEPVLILLDRQQTTWNDNSYFAVDADGKVE
LGWFAEAPIAKILGQVLLVMRPKKILDENNLREPWQMDD
>Mature_359_residues
MIGQPQSPEYKLSPEETDALFRSLLHKEGTWVEWGVGCQQLQQSGHSAQEIFEQTGFQTAQQNMIIVAAQVYQSIASSGV
PEDLLAYCRGPRSDVLYELRILSHSQRAIAAQVCQAKSLEFDGAKELARAMQEFARLPQIPDSFTEHPGDAVAYQAWRSA
KQKKDLQDRTRLIAKGLKFAHSATARQKIEQLLSDLTTSPTKAAPLLPLYRYDEDTNVPLLIPVAGSLPLESDRLLSVPP
LKQASPFNLVTVATATSLVPLPSWQNVLTAGDPVVIFHQTDQLPQPIPGKPEPVLILLDRQQTTWNDNSYFAVDADGKVE
LGWFAEAPIAKILGQVLLVMRPKKILDENNLREPWQMDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39911; Mature: 39911

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGQPQSPEYKLSPEETDALFRSLLHKEGTWVEWGVGCQQLQQSGHSAQEIFEQTGFQTA
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCHHHHHHHHHCCHHH
QQNMIIVAAQVYQSIASSGVPEDLLAYCRGPRSDVLYELRILSHSQRAIAAQVCQAKSLE
HCCEEEEHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCC
FDGAKELARAMQEFARLPQIPDSFTEHPGDAVAYQAWRSAKQKKDLQDRTRLIAKGLKFA
CCCHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSATARQKIEQLLSDLTTSPTKAAPLLPLYRYDEDTNVPLLIPVAGSLPLESDRLLSVPP
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCEECCCC
LKQASPFNLVTVATATSLVPLPSWQNVLTAGDPVVIFHQTDQLPQPIPGKPEPVLILLDR
CCCCCCCCEEEEEHHHHCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEC
QQTTWNDNSYFAVDADGKVELGWFAEAPIAKILGQVLLVMRPKKILDENNLREPWQMDD
CCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIGQPQSPEYKLSPEETDALFRSLLHKEGTWVEWGVGCQQLQQSGHSAQEIFEQTGFQTA
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCHHHHHHHHHCCHHH
QQNMIIVAAQVYQSIASSGVPEDLLAYCRGPRSDVLYELRILSHSQRAIAAQVCQAKSLE
HCCEEEEHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCC
FDGAKELARAMQEFARLPQIPDSFTEHPGDAVAYQAWRSAKQKKDLQDRTRLIAKGLKFA
CCCHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSATARQKIEQLLSDLTTSPTKAAPLLPLYRYDEDTNVPLLIPVAGSLPLESDRLLSVPP
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCEECCCC
LKQASPFNLVTVATATSLVPLPSWQNVLTAGDPVVIFHQTDQLPQPIPGKPEPVLILLDR
CCCCCCCCEEEEEHHHHCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEC
QQTTWNDNSYFAVDADGKVELGWFAEAPIAKILGQVLLVMRPKKILDENNLREPWQMDD
CCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA