| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078983
Identifier: 170078983
GI number: 170078983
Start: 2467879
End: 2468958
Strand: Reverse
Name: 170078983
Synonym: SYNPCC7002_A2388
Alternate gene names: NA
Gene position: 2468958-2467879 (Counterclockwise)
Preceding gene: 170078986
Following gene: 170078982
Centisome position: 82.08
GC content: 54.54
Gene sequence:
>1080_bases ATGATTGGACAACCGCAATCTCCAGAATACAAACTCTCCCCTGAAGAAACGGACGCTTTATTCCGGTCACTACTCCACAA GGAAGGGACTTGGGTCGAGTGGGGCGTCGGTTGCCAACAACTCCAGCAGTCAGGCCATAGCGCCCAGGAAATTTTTGAGC AGACAGGTTTCCAGACGGCCCAGCAAAATATGATCATTGTGGCGGCCCAGGTGTACCAAAGCATCGCAAGCAGTGGTGTG CCCGAAGATCTGCTGGCCTATTGCCGTGGCCCCCGTTCTGATGTGCTGTACGAACTACGGATCCTCAGTCATAGTCAAAG GGCGATCGCCGCCCAGGTGTGCCAGGCCAAAAGCCTTGAATTTGATGGGGCGAAGGAACTGGCCCGGGCAATGCAAGAGT TTGCCCGCTTACCCCAAATTCCCGATAGCTTCACAGAACACCCTGGAGATGCCGTTGCCTACCAAGCCTGGCGCTCCGCC AAGCAAAAAAAAGATTTACAAGACCGCACCCGCCTCATCGCCAAGGGGCTAAAGTTTGCCCATTCCGCCACGGCCCGGCA AAAAATCGAGCAACTCCTCAGTGACCTCACCACCAGCCCCACCAAGGCAGCCCCGCTCCTCCCCCTCTACCGTTACGACG AAGACACCAATGTTCCCCTGCTAATTCCGGTGGCGGGATCTTTACCGTTAGAAAGCGATCGCCTGTTGAGCGTCCCCCCC CTCAAGCAAGCGTCTCCTTTTAATCTCGTGACAGTTGCCACAGCGACAAGTCTGGTGCCGCTACCCAGTTGGCAAAATGT ACTGACGGCGGGAGATCCGGTGGTGATCTTCCACCAAACTGATCAACTGCCCCAGCCCATCCCCGGTAAGCCGGAACCTG TTTTAATTTTGCTGGATCGTCAACAAACCACCTGGAATGACAACAGCTATTTTGCGGTAGATGCCGACGGCAAGGTGGAA TTGGGTTGGTTTGCCGAAGCACCGATCGCCAAAATTTTAGGCCAAGTCCTCTTGGTGATGCGCCCGAAAAAAATTCTCGA TGAGAATAACCTTCGGGAACCCTGGCAAATGGACGATTAA
Upstream 100 bases:
>100_bases GGAAGGATCGGTTTAGAACAGTCTCGCTTTATGATTAAGTTTATCGGGCAAATACTGATTTACCTATCATTTTACGTTAT TCCACTTTTGATTCGGCTTT
Downstream 100 bases:
>100_bases GCGCAAAAAATGCTGCTTTTACCCGAATTTTTCTCTATTTAACGCCAAAATTTTTATCTAGAAATTTCTCCTAACGGTGT ACTAGATAGCATTACTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MIGQPQSPEYKLSPEETDALFRSLLHKEGTWVEWGVGCQQLQQSGHSAQEIFEQTGFQTAQQNMIIVAAQVYQSIASSGV PEDLLAYCRGPRSDVLYELRILSHSQRAIAAQVCQAKSLEFDGAKELARAMQEFARLPQIPDSFTEHPGDAVAYQAWRSA KQKKDLQDRTRLIAKGLKFAHSATARQKIEQLLSDLTTSPTKAAPLLPLYRYDEDTNVPLLIPVAGSLPLESDRLLSVPP LKQASPFNLVTVATATSLVPLPSWQNVLTAGDPVVIFHQTDQLPQPIPGKPEPVLILLDRQQTTWNDNSYFAVDADGKVE LGWFAEAPIAKILGQVLLVMRPKKILDENNLREPWQMDD
Sequences:
>Translated_359_residues MIGQPQSPEYKLSPEETDALFRSLLHKEGTWVEWGVGCQQLQQSGHSAQEIFEQTGFQTAQQNMIIVAAQVYQSIASSGV PEDLLAYCRGPRSDVLYELRILSHSQRAIAAQVCQAKSLEFDGAKELARAMQEFARLPQIPDSFTEHPGDAVAYQAWRSA KQKKDLQDRTRLIAKGLKFAHSATARQKIEQLLSDLTTSPTKAAPLLPLYRYDEDTNVPLLIPVAGSLPLESDRLLSVPP LKQASPFNLVTVATATSLVPLPSWQNVLTAGDPVVIFHQTDQLPQPIPGKPEPVLILLDRQQTTWNDNSYFAVDADGKVE LGWFAEAPIAKILGQVLLVMRPKKILDENNLREPWQMDD >Mature_359_residues MIGQPQSPEYKLSPEETDALFRSLLHKEGTWVEWGVGCQQLQQSGHSAQEIFEQTGFQTAQQNMIIVAAQVYQSIASSGV PEDLLAYCRGPRSDVLYELRILSHSQRAIAAQVCQAKSLEFDGAKELARAMQEFARLPQIPDSFTEHPGDAVAYQAWRSA KQKKDLQDRTRLIAKGLKFAHSATARQKIEQLLSDLTTSPTKAAPLLPLYRYDEDTNVPLLIPVAGSLPLESDRLLSVPP LKQASPFNLVTVATATSLVPLPSWQNVLTAGDPVVIFHQTDQLPQPIPGKPEPVLILLDRQQTTWNDNSYFAVDADGKVE LGWFAEAPIAKILGQVLLVMRPKKILDENNLREPWQMDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39911; Mature: 39911
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGQPQSPEYKLSPEETDALFRSLLHKEGTWVEWGVGCQQLQQSGHSAQEIFEQTGFQTA CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCHHHHHHHHHCCHHH QQNMIIVAAQVYQSIASSGVPEDLLAYCRGPRSDVLYELRILSHSQRAIAAQVCQAKSLE HCCEEEEHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCC FDGAKELARAMQEFARLPQIPDSFTEHPGDAVAYQAWRSAKQKKDLQDRTRLIAKGLKFA CCCHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSATARQKIEQLLSDLTTSPTKAAPLLPLYRYDEDTNVPLLIPVAGSLPLESDRLLSVPP HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCEECCCC LKQASPFNLVTVATATSLVPLPSWQNVLTAGDPVVIFHQTDQLPQPIPGKPEPVLILLDR CCCCCCCCEEEEEHHHHCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEC QQTTWNDNSYFAVDADGKVELGWFAEAPIAKILGQVLLVMRPKKILDENNLREPWQMDD CCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIGQPQSPEYKLSPEETDALFRSLLHKEGTWVEWGVGCQQLQQSGHSAQEIFEQTGFQTA CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCHHHHHHHHHCCHHH QQNMIIVAAQVYQSIASSGVPEDLLAYCRGPRSDVLYELRILSHSQRAIAAQVCQAKSLE HCCEEEEHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCC FDGAKELARAMQEFARLPQIPDSFTEHPGDAVAYQAWRSAKQKKDLQDRTRLIAKGLKFA CCCHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSATARQKIEQLLSDLTTSPTKAAPLLPLYRYDEDTNVPLLIPVAGSLPLESDRLLSVPP HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCEECCCC LKQASPFNLVTVATATSLVPLPSWQNVLTAGDPVVIFHQTDQLPQPIPGKPEPVLILLDR CCCCCCCCEEEEEHHHHCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEC QQTTWNDNSYFAVDADGKVELGWFAEAPIAKILGQVLLVMRPKKILDENNLREPWQMDD CCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA