Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is thiO/thiG [H]

Identifier: 170078955

GI number: 170078955

Start: 2441777

End: 2442880

Strand: Reverse

Name: thiO/thiG [H]

Synonym: SYNPCC7002_A2360

Alternate gene names: 170078955

Gene position: 2442880-2441777 (Counterclockwise)

Preceding gene: 170078956

Following gene: 170078954

Centisome position: 81.21

GC content: 53.89

Gene sequence:

>1104_bases
ATGGTAAAACGGGTTGTGATTTTGGGAGCAGGGGTCGTTGGGGCGGCGATCGCCTACGAGTTGAGTCAACTGGATCAGTT
CAAGATTACGGTTTTGGACACAGCCCAACCCGCCAGGGGCTCGACGGGGGCTGCCTTGGGGATGCTGATGGGGATCATCA
GTCGCAAAACGAAAGGACGCGCCTGGACATTACGCCGCCGCAGTATGGAACGCTTTCCGAGACTTTTAGAGGAACTTGCC
GCCGCAGGTCAGCCAGTACCCCACAATTCTCACGGCATTTTGAAATTATTGCGGGAACCAGAAGAACTAGAAAAAGGCGA
TCGCCTCCGGGAATTGCGCCAAGCATCGGGTTGGCAGTTGGCAATCTGGGATCAAGAAATCATTCAACAACATTGTCCCC
ACCTCCAAGCCAAGGAAGCCGCTGGCGGCATTTTTTCGCCCCAGGATTTCCAGGTGCAGCCCGTCCCCTTCACCAAAGCC
TTACTAGCCGTCGCCCAACAGAATGGTGCGCACTGCTACTTTGGAATTTCCCAACCCAAGTTGGAGATCACAGATCAACA
TTGTCAAAAAATTAGCACAGATCAAAACAGCTATCCTTGCGATTGGCTCATTGTTTCAGCGGGTCTGGGTTCCCTGGAGG
TTACTAAACATCTAAGCGAAAGCCTGTCCCTGGGGCCAGTATTGGGGCAAGCCTTTCACCTGCGCGTGCCAAAAAAGCTT
GAACCGCAAACCCCTTTTCAACCCGTGGTTAGCTTTGAAGATATCCATGTGGTACCCCTGGGCCAAGGGGAATATTGGGT
AGGGGCGACGGTGGAATTTCCTGCTGAAACAGGTGGAATCACTCCAGACATCACCCTCGCCGATCAAGTGCTCCAAAAGG
CGATCGCCTTCTATCCGCTTTTAAAAAATGCAGAAATTCTCCGGCATTGGTCAGGGAAACGGCCCCGGCCCAACGGTCAA
GGTGCTCCCGTTCTCAAAGGGTTAGCGGGTTACGACAATATCCTCCTGGCCACAGGCCACTACCGCAATGGCGTCCTCCT
GGCCCCAGCGACGGCCCTAACGATTCGCGATTGGCTCCTGGCCCCAGAAACCATTCCTTTTTAG

Upstream 100 bases:

>100_bases
TGTGGCCGAGGAGTTGCAGCGGGCTGGGTTTGAAGCGCCCTTCATCCAAGAAAATACCGTCCGTCACCGCACGGTTATTG
CCAAGGTCAGGGATTAAGCG

Downstream 100 bases:

>100_bases
TTTGTCCCAGTCCCTAATTTTTCTCACGTAAACCATGACGACCTCCGGCACCCTTTATTTGGTGGGCACCCCCATCGGCA
ATCTCGATGACATGACTTTC

Product: FAD dependent oxidoreductase, putative

Products: NA

Alternate protein names: Probable FAD-dependent glycine oxidase; Thiazole synthase [H]

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MVKRVVILGAGVVGAAIAYELSQLDQFKITVLDTAQPARGSTGAALGMLMGIISRKTKGRAWTLRRRSMERFPRLLEELA
AAGQPVPHNSHGILKLLREPEELEKGDRLRELRQASGWQLAIWDQEIIQQHCPHLQAKEAAGGIFSPQDFQVQPVPFTKA
LLAVAQQNGAHCYFGISQPKLEITDQHCQKISTDQNSYPCDWLIVSAGLGSLEVTKHLSESLSLGPVLGQAFHLRVPKKL
EPQTPFQPVVSFEDIHVVPLGQGEYWVGATVEFPAETGGITPDITLADQVLQKAIAFYPLLKNAEILRHWSGKRPRPNGQ
GAPVLKGLAGYDNILLATGHYRNGVLLAPATALTIRDWLLAPETIPF

Sequences:

>Translated_367_residues
MVKRVVILGAGVVGAAIAYELSQLDQFKITVLDTAQPARGSTGAALGMLMGIISRKTKGRAWTLRRRSMERFPRLLEELA
AAGQPVPHNSHGILKLLREPEELEKGDRLRELRQASGWQLAIWDQEIIQQHCPHLQAKEAAGGIFSPQDFQVQPVPFTKA
LLAVAQQNGAHCYFGISQPKLEITDQHCQKISTDQNSYPCDWLIVSAGLGSLEVTKHLSESLSLGPVLGQAFHLRVPKKL
EPQTPFQPVVSFEDIHVVPLGQGEYWVGATVEFPAETGGITPDITLADQVLQKAIAFYPLLKNAEILRHWSGKRPRPNGQ
GAPVLKGLAGYDNILLATGHYRNGVLLAPATALTIRDWLLAPETIPF
>Mature_367_residues
MVKRVVILGAGVVGAAIAYELSQLDQFKITVLDTAQPARGSTGAALGMLMGIISRKTKGRAWTLRRRSMERFPRLLEELA
AAGQPVPHNSHGILKLLREPEELEKGDRLRELRQASGWQLAIWDQEIIQQHCPHLQAKEAAGGIFSPQDFQVQPVPFTKA
LLAVAQQNGAHCYFGISQPKLEITDQHCQKISTDQNSYPCDWLIVSAGLGSLEVTKHLSESLSLGPVLGQAFHLRVPKKL
EPQTPFQPVVSFEDIHVVPLGQGEYWVGATVEFPAETGGITPDITLADQVLQKAIAFYPLLKNAEILRHWSGKRPRPNGQ
GAPVLKGLAGYDNILLATGHYRNGVLLAPATALTIRDWLLAPETIPF

Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the thiG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006076
- InterPro:   IPR012727
- InterPro:   IPR008867 [H]

Pfam domain/function: PF01266 DAO; PF05690 ThiG [H]

EC number: NA

Molecular weight: Translated: 40232; Mature: 40232

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRVVILGAGVVGAAIAYELSQLDQFKITVLDTAQPARGSTGAALGMLMGIISRKTKGR
CCEEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCC
AWTLRRRSMERFPRLLEELAAAGQPVPHNSHGILKLLREPEELEKGDRLRELRQASGWQL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEE
AIWDQEIIQQHCPHLQAKEAAGGIFSPQDFQVQPVPFTKALLAVAQQNGAHCYFGISQPK
EECCHHHHHHHCCCCCHHHHCCCCCCCCCCEEECCCHHHHHHHHHHCCCCEEEEECCCCC
LEITDQHCQKISTDQNSYPCDWLIVSAGLGSLEVTKHLSESLSLGPVLGQAFHLRVPKKL
EEECHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHCCCEEEECCCCC
EPQTPFQPVVSFEDIHVVPLGQGEYWVGATVEFPAETGGITPDITLADQVLQKAIAFYPL
CCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
LKNAEILRHWSGKRPRPNGQGAPVLKGLAGYDNILLATGHYRNGVLLAPATALTIRDWLL
HCCHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCEEECCCHHHHHHHHHC
APETIPF
CCCCCCC
>Mature Secondary Structure
MVKRVVILGAGVVGAAIAYELSQLDQFKITVLDTAQPARGSTGAALGMLMGIISRKTKGR
CCEEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCC
AWTLRRRSMERFPRLLEELAAAGQPVPHNSHGILKLLREPEELEKGDRLRELRQASGWQL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEE
AIWDQEIIQQHCPHLQAKEAAGGIFSPQDFQVQPVPFTKALLAVAQQNGAHCYFGISQPK
EECCHHHHHHHCCCCCHHHHCCCCCCCCCCEEECCCHHHHHHHHHHCCCCEEEEECCCCC
LEITDQHCQKISTDQNSYPCDWLIVSAGLGSLEVTKHLSESLSLGPVLGQAFHLRVPKKL
EEECHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHCCCEEEECCCCC
EPQTPFQPVVSFEDIHVVPLGQGEYWVGATVEFPAETGGITPDITLADQVLQKAIAFYPL
CCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
LKNAEILRHWSGKRPRPNGQGAPVLKGLAGYDNILLATGHYRNGVLLAPATALTIRDWLL
HCCHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCEEECCCHHHHHHHHHC
APETIPF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA