| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is thiO/thiG [H]
Identifier: 170078955
GI number: 170078955
Start: 2441777
End: 2442880
Strand: Reverse
Name: thiO/thiG [H]
Synonym: SYNPCC7002_A2360
Alternate gene names: 170078955
Gene position: 2442880-2441777 (Counterclockwise)
Preceding gene: 170078956
Following gene: 170078954
Centisome position: 81.21
GC content: 53.89
Gene sequence:
>1104_bases ATGGTAAAACGGGTTGTGATTTTGGGAGCAGGGGTCGTTGGGGCGGCGATCGCCTACGAGTTGAGTCAACTGGATCAGTT CAAGATTACGGTTTTGGACACAGCCCAACCCGCCAGGGGCTCGACGGGGGCTGCCTTGGGGATGCTGATGGGGATCATCA GTCGCAAAACGAAAGGACGCGCCTGGACATTACGCCGCCGCAGTATGGAACGCTTTCCGAGACTTTTAGAGGAACTTGCC GCCGCAGGTCAGCCAGTACCCCACAATTCTCACGGCATTTTGAAATTATTGCGGGAACCAGAAGAACTAGAAAAAGGCGA TCGCCTCCGGGAATTGCGCCAAGCATCGGGTTGGCAGTTGGCAATCTGGGATCAAGAAATCATTCAACAACATTGTCCCC ACCTCCAAGCCAAGGAAGCCGCTGGCGGCATTTTTTCGCCCCAGGATTTCCAGGTGCAGCCCGTCCCCTTCACCAAAGCC TTACTAGCCGTCGCCCAACAGAATGGTGCGCACTGCTACTTTGGAATTTCCCAACCCAAGTTGGAGATCACAGATCAACA TTGTCAAAAAATTAGCACAGATCAAAACAGCTATCCTTGCGATTGGCTCATTGTTTCAGCGGGTCTGGGTTCCCTGGAGG TTACTAAACATCTAAGCGAAAGCCTGTCCCTGGGGCCAGTATTGGGGCAAGCCTTTCACCTGCGCGTGCCAAAAAAGCTT GAACCGCAAACCCCTTTTCAACCCGTGGTTAGCTTTGAAGATATCCATGTGGTACCCCTGGGCCAAGGGGAATATTGGGT AGGGGCGACGGTGGAATTTCCTGCTGAAACAGGTGGAATCACTCCAGACATCACCCTCGCCGATCAAGTGCTCCAAAAGG CGATCGCCTTCTATCCGCTTTTAAAAAATGCAGAAATTCTCCGGCATTGGTCAGGGAAACGGCCCCGGCCCAACGGTCAA GGTGCTCCCGTTCTCAAAGGGTTAGCGGGTTACGACAATATCCTCCTGGCCACAGGCCACTACCGCAATGGCGTCCTCCT GGCCCCAGCGACGGCCCTAACGATTCGCGATTGGCTCCTGGCCCCAGAAACCATTCCTTTTTAG
Upstream 100 bases:
>100_bases TGTGGCCGAGGAGTTGCAGCGGGCTGGGTTTGAAGCGCCCTTCATCCAAGAAAATACCGTCCGTCACCGCACGGTTATTG CCAAGGTCAGGGATTAAGCG
Downstream 100 bases:
>100_bases TTTGTCCCAGTCCCTAATTTTTCTCACGTAAACCATGACGACCTCCGGCACCCTTTATTTGGTGGGCACCCCCATCGGCA ATCTCGATGACATGACTTTC
Product: FAD dependent oxidoreductase, putative
Products: NA
Alternate protein names: Probable FAD-dependent glycine oxidase; Thiazole synthase [H]
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MVKRVVILGAGVVGAAIAYELSQLDQFKITVLDTAQPARGSTGAALGMLMGIISRKTKGRAWTLRRRSMERFPRLLEELA AAGQPVPHNSHGILKLLREPEELEKGDRLRELRQASGWQLAIWDQEIIQQHCPHLQAKEAAGGIFSPQDFQVQPVPFTKA LLAVAQQNGAHCYFGISQPKLEITDQHCQKISTDQNSYPCDWLIVSAGLGSLEVTKHLSESLSLGPVLGQAFHLRVPKKL EPQTPFQPVVSFEDIHVVPLGQGEYWVGATVEFPAETGGITPDITLADQVLQKAIAFYPLLKNAEILRHWSGKRPRPNGQ GAPVLKGLAGYDNILLATGHYRNGVLLAPATALTIRDWLLAPETIPF
Sequences:
>Translated_367_residues MVKRVVILGAGVVGAAIAYELSQLDQFKITVLDTAQPARGSTGAALGMLMGIISRKTKGRAWTLRRRSMERFPRLLEELA AAGQPVPHNSHGILKLLREPEELEKGDRLRELRQASGWQLAIWDQEIIQQHCPHLQAKEAAGGIFSPQDFQVQPVPFTKA LLAVAQQNGAHCYFGISQPKLEITDQHCQKISTDQNSYPCDWLIVSAGLGSLEVTKHLSESLSLGPVLGQAFHLRVPKKL EPQTPFQPVVSFEDIHVVPLGQGEYWVGATVEFPAETGGITPDITLADQVLQKAIAFYPLLKNAEILRHWSGKRPRPNGQ GAPVLKGLAGYDNILLATGHYRNGVLLAPATALTIRDWLLAPETIPF >Mature_367_residues MVKRVVILGAGVVGAAIAYELSQLDQFKITVLDTAQPARGSTGAALGMLMGIISRKTKGRAWTLRRRSMERFPRLLEELA AAGQPVPHNSHGILKLLREPEELEKGDRLRELRQASGWQLAIWDQEIIQQHCPHLQAKEAAGGIFSPQDFQVQPVPFTKA LLAVAQQNGAHCYFGISQPKLEITDQHCQKISTDQNSYPCDWLIVSAGLGSLEVTKHLSESLSLGPVLGQAFHLRVPKKL EPQTPFQPVVSFEDIHVVPLGQGEYWVGATVEFPAETGGITPDITLADQVLQKAIAFYPLLKNAEILRHWSGKRPRPNGQ GAPVLKGLAGYDNILLATGHYRNGVLLAPATALTIRDWLLAPETIPF
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the thiG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006076 - InterPro: IPR012727 - InterPro: IPR008867 [H]
Pfam domain/function: PF01266 DAO; PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 40232; Mature: 40232
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKRVVILGAGVVGAAIAYELSQLDQFKITVLDTAQPARGSTGAALGMLMGIISRKTKGR CCEEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCC AWTLRRRSMERFPRLLEELAAAGQPVPHNSHGILKLLREPEELEKGDRLRELRQASGWQL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEE AIWDQEIIQQHCPHLQAKEAAGGIFSPQDFQVQPVPFTKALLAVAQQNGAHCYFGISQPK EECCHHHHHHHCCCCCHHHHCCCCCCCCCCEEECCCHHHHHHHHHHCCCCEEEEECCCCC LEITDQHCQKISTDQNSYPCDWLIVSAGLGSLEVTKHLSESLSLGPVLGQAFHLRVPKKL EEECHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHCCCEEEECCCCC EPQTPFQPVVSFEDIHVVPLGQGEYWVGATVEFPAETGGITPDITLADQVLQKAIAFYPL CCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH LKNAEILRHWSGKRPRPNGQGAPVLKGLAGYDNILLATGHYRNGVLLAPATALTIRDWLL HCCHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCEEECCCHHHHHHHHHC APETIPF CCCCCCC >Mature Secondary Structure MVKRVVILGAGVVGAAIAYELSQLDQFKITVLDTAQPARGSTGAALGMLMGIISRKTKGR CCEEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCC AWTLRRRSMERFPRLLEELAAAGQPVPHNSHGILKLLREPEELEKGDRLRELRQASGWQL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEE AIWDQEIIQQHCPHLQAKEAAGGIFSPQDFQVQPVPFTKALLAVAQQNGAHCYFGISQPK EECCHHHHHHHCCCCCHHHHCCCCCCCCCCEEECCCHHHHHHHHHHCCCCEEEEECCCCC LEITDQHCQKISTDQNSYPCDWLIVSAGLGSLEVTKHLSESLSLGPVLGQAFHLRVPKKL EEECHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHCCCEEEECCCCC EPQTPFQPVVSFEDIHVVPLGQGEYWVGATVEFPAETGGITPDITLADQVLQKAIAFYPL CCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH LKNAEILRHWSGKRPRPNGQGAPVLKGLAGYDNILLATGHYRNGVLLAPATALTIRDWLL HCCHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCEEECCCHHHHHHHHHC APETIPF CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA