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The map label for this gene is yraN [C]

Identifier: 170078932

GI number: 170078932

Start: 2412913

End: 2413335

Strand: Direct

Name: yraN [C]

Synonym: SYNPCC7002_A2337

Alternate gene names: 170078932

Gene position: 2412913-2413335 (Clockwise)

Preceding gene: 170078931

Following gene: 170078933

Centisome position: 80.22

GC content: 50.83

Gene sequence:

>423_bases
ATGGCTGACACCCCTTCACCCGAAAAATTAGCGGCCCTTGCCGTTGGTGAGCAGGGAGAGCTTTTTGTGCAGCAGCATCT
CAAAAGCCAGGATTGGCAGATTGTCGCAACCCGTTGGCGCTGTCGTTGGGGAGAATTGGATCTGGTTGCGTTTCATGCCC
AGACAAAAATTCTTGCTTTTGTAGAGGTAAAAACCCGACAACAGCACAGCTTGGATTATCAAGGCTTACTGGCGATCACC
CCCAGCAAACAACGCAAAACCATCCGGGCGGCGATGCAATTTTTAAGTAAATTTCCCCAATATGAAACCTACGGTTGTCG
CTTTGATGTGGCCCTTGTCACCTACAGCAAAACTGCAACCTTTCCCCAGGGTTTCCGCCTAGCTACTTACTTGGAAGGGG
CATTCGAGGCCGATGCGTCCTAG

Upstream 100 bases:

>100_bases
GTTGAACAAATACCGCGACTTGGTGACCCGTCTACTCCAGGAGCAAAATCCGGAAAATCTCCAGGGCTATTCAGAATCTG
GAGGGATGTAAGCATTTGCC

Downstream 100 bases:

>100_bases
AATGTAGGGTGTTTTCCGTGATTCTTAAAGCCCTGTGGCGATCGCCCCATGACCACTTCTGAACTTAGCTCTACCTCCGC
GCAAAATTTACCCACTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MADTPSPEKLAALAVGEQGELFVQQHLKSQDWQIVATRWRCRWGELDLVAFHAQTKILAFVEVKTRQQHSLDYQGLLAIT
PSKQRKTIRAAMQFLSKFPQYETYGCRFDVALVTYSKTATFPQGFRLATYLEGAFEADAS

Sequences:

>Translated_140_residues
MADTPSPEKLAALAVGEQGELFVQQHLKSQDWQIVATRWRCRWGELDLVAFHAQTKILAFVEVKTRQQHSLDYQGLLAIT
PSKQRKTIRAAMQFLSKFPQYETYGCRFDVALVTYSKTATFPQGFRLATYLEGAFEADAS
>Mature_139_residues
ADTPSPEKLAALAVGEQGELFVQQHLKSQDWQIVATRWRCRWGELDLVAFHAQTKILAFVEVKTRQQHSLDYQGLLAITP
SKQRKTIRAAMQFLSKFPQYETYGCRFDVALVTYSKTATFPQGFRLATYLEGAFEADAS

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 15906; Mature: 15775

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTPSPEKLAALAVGEQGELFVQQHLKSQDWQIVATRWRCRWGELDLVAFHAQTKILAF
CCCCCCCHHEEEEEECCCCCHHHHHHCCCCCEEEEEEEEEEECCCEEEEEEECCCEEEEE
VEVKTRQQHSLDYQGLLAITPSKQRKTIRAAMQFLSKFPQYETYGCRFDVALVTYSKTAT
EEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCC
FPQGFRLATYLEGAFEADAS
CCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure 
ADTPSPEKLAALAVGEQGELFVQQHLKSQDWQIVATRWRCRWGELDLVAFHAQTKILAF
CCCCCCHHEEEEEECCCCCHHHHHHCCCCCEEEEEEEEEEECCCEEEEEEECCCEEEEE
VEVKTRQQHSLDYQGLLAITPSKQRKTIRAAMQFLSKFPQYETYGCRFDVALVTYSKTAT
EEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCC
FPQGFRLATYLEGAFEADAS
CCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA