| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078904
Identifier: 170078904
GI number: 170078904
Start: 2388373
End: 2388609
Strand: Direct
Name: 170078904
Synonym: SYNPCC7002_A2309
Alternate gene names: NA
Gene position: 2388373-2388609 (Clockwise)
Preceding gene: 170078902
Following gene: 170078906
Centisome position: 79.4
GC content: 50.63
Gene sequence:
>237_bases ATGAGTGAATTCGCTGATTTTATGAGCATCATGCACGATGACCTTGGCGAACATTATCAACGCATCATGATGACCTATAA GGGGAATATTACCCCCGATACGGCGTTCCAGGCGGCGGCACTCCTCACAGCAGCCCAGAGTAACGCGACTTATACGAGTC AGCTCCAGGGGGAAATTGAGTCCCTCCGCAAAACCTTGATCGCCATCGAAAAATCCCGGCGGGATTCCCAAAGTTAA
Upstream 100 bases:
>100_bases AAATACATTCGGTAAATTTCTCCGGCGATCGCCTTGCATCTCCGCTACCATGGCCATGTAAGGTAACTAAAACCCCCTAA CGGCTTGGAGAAGCGGGAAA
Downstream 100 bases:
>100_bases ATCCAGTTAATTTCCTGGACGACAGTGACTATTCACTAAGGCGATCGCCGTGATCGAAGCCGTCACCGCCCGCAGAATCG AATTTCCCAAGGAGACGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSEFADFMSIMHDDLGEHYQRIMMTYKGNITPDTAFQAAALLTAAQSNATYTSQLQGEIESLRKTLIAIEKSRRDSQS
Sequences:
>Translated_78_residues MSEFADFMSIMHDDLGEHYQRIMMTYKGNITPDTAFQAAALLTAAQSNATYTSQLQGEIESLRKTLIAIEKSRRDSQS >Mature_77_residues SEFADFMSIMHDDLGEHYQRIMMTYKGNITPDTAFQAAALLTAAQSNATYTSQLQGEIESLRKTLIAIEKSRRDSQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8777; Mature: 8646
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFADFMSIMHDDLGEHYQRIMMTYKGNITPDTAFQAAALLTAAQSNATYTSQLQGEIE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH SLRKTLIAIEKSRRDSQS HHHHHHHHHHHHHCCCCC >Mature Secondary Structure SEFADFMSIMHDDLGEHYQRIMMTYKGNITPDTAFQAAALLTAAQSNATYTSQLQGEIE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH SLRKTLIAIEKSRRDSQS HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA