Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078904

Identifier: 170078904

GI number: 170078904

Start: 2388373

End: 2388609

Strand: Direct

Name: 170078904

Synonym: SYNPCC7002_A2309

Alternate gene names: NA

Gene position: 2388373-2388609 (Clockwise)

Preceding gene: 170078902

Following gene: 170078906

Centisome position: 79.4

GC content: 50.63

Gene sequence:

>237_bases
ATGAGTGAATTCGCTGATTTTATGAGCATCATGCACGATGACCTTGGCGAACATTATCAACGCATCATGATGACCTATAA
GGGGAATATTACCCCCGATACGGCGTTCCAGGCGGCGGCACTCCTCACAGCAGCCCAGAGTAACGCGACTTATACGAGTC
AGCTCCAGGGGGAAATTGAGTCCCTCCGCAAAACCTTGATCGCCATCGAAAAATCCCGGCGGGATTCCCAAAGTTAA

Upstream 100 bases:

>100_bases
AAATACATTCGGTAAATTTCTCCGGCGATCGCCTTGCATCTCCGCTACCATGGCCATGTAAGGTAACTAAAACCCCCTAA
CGGCTTGGAGAAGCGGGAAA

Downstream 100 bases:

>100_bases
ATCCAGTTAATTTCCTGGACGACAGTGACTATTCACTAAGGCGATCGCCGTGATCGAAGCCGTCACCGCCCGCAGAATCG
AATTTCCCAAGGAGACGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MSEFADFMSIMHDDLGEHYQRIMMTYKGNITPDTAFQAAALLTAAQSNATYTSQLQGEIESLRKTLIAIEKSRRDSQS

Sequences:

>Translated_78_residues
MSEFADFMSIMHDDLGEHYQRIMMTYKGNITPDTAFQAAALLTAAQSNATYTSQLQGEIESLRKTLIAIEKSRRDSQS
>Mature_77_residues
SEFADFMSIMHDDLGEHYQRIMMTYKGNITPDTAFQAAALLTAAQSNATYTSQLQGEIESLRKTLIAIEKSRRDSQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8777; Mature: 8646

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFADFMSIMHDDLGEHYQRIMMTYKGNITPDTAFQAAALLTAAQSNATYTSQLQGEIE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
SLRKTLIAIEKSRRDSQS
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SEFADFMSIMHDDLGEHYQRIMMTYKGNITPDTAFQAAALLTAAQSNATYTSQLQGEIE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
SLRKTLIAIEKSRRDSQS
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA