Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078901

Identifier: 170078901

GI number: 170078901

Start: 2385142

End: 2385756

Strand: Direct

Name: 170078901

Synonym: SYNPCC7002_A2306

Alternate gene names: NA

Gene position: 2385142-2385756 (Clockwise)

Preceding gene: 170078896

Following gene: 170078902

Centisome position: 79.29

GC content: 50.08

Gene sequence:

>615_bases
ATGTTCCAGGTTTTGCGTCGTTATCTGAGTGCCAGTGTGGGCCTTGGCTGTCTCATGGGGCAAATGATCTGTGCACCAGC
CCAAGCTAATCCAGTAGGAATTCAGTTCCAAGGGGCTGCCAATGCCGTCTTTGTAGCCCAACAGCTCGGCTTTCCTCCTG
TACCTCCCAATACTGGGATTATCGGCCCTTTTTCCGATGATCAGGGTTTAATTTATCTGGATGCCCAAGGGCGGATCAGT
TATTTTTCACCGAGTCAGGTGACGGTTTTTTTCGCCCAGGCCAACGCCAATAATGGCCCAAAAATTCTCTATGCCCTGAC
CCCCACTGCCACCTACAGAATGCAAAATAATCAGGCGATCGCCGTTGACCCAAACACTATCGAAGCGGCGATTACCCCCT
GGCCCTATTCGGGGGTGATGGTGAATGTTTTAATTGCCTACCTCCAGCAATACCAAGCCCAGCTAATGGCGAGTGGAGGC
GTTACGGTTTCCGCCGAACAGCAATCCTATGTCAGTTCAATGCTCCACAACACCAGCATGAATATTTTGAATAATATTGG
CAGTGAAGGTTGCACCGAACACTACGAAGATGTTTACTACCTCGGCTGCTGGTAA

Upstream 100 bases:

>100_bases
CTAATGGAGCAGATTTTCGGGCGGCGGAAAAATCCTGAAAAGTGCCCCCAATGCTGTTGTGATTGTTTGAAATCAAGTAT
TACTGAGGGAGAAAGCTGTG

Downstream 100 bases:

>100_bases
GGTGAGTACATCGCGTTCGGCCCCAAGCACAATCATTTTTTTGTCATTGGGTGCAGAGCGGCAAATATCGCTATCGTAAA
ATCGCAACACATTTTTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MFQVLRRYLSASVGLGCLMGQMICAPAQANPVGIQFQGAANAVFVAQQLGFPPVPPNTGIIGPFSDDQGLIYLDAQGRIS
YFSPSQVTVFFAQANANNGPKILYALTPTATYRMQNNQAIAVDPNTIEAAITPWPYSGVMVNVLIAYLQQYQAQLMASGG
VTVSAEQQSYVSSMLHNTSMNILNNIGSEGCTEHYEDVYYLGCW

Sequences:

>Translated_204_residues
MFQVLRRYLSASVGLGCLMGQMICAPAQANPVGIQFQGAANAVFVAQQLGFPPVPPNTGIIGPFSDDQGLIYLDAQGRIS
YFSPSQVTVFFAQANANNGPKILYALTPTATYRMQNNQAIAVDPNTIEAAITPWPYSGVMVNVLIAYLQQYQAQLMASGG
VTVSAEQQSYVSSMLHNTSMNILNNIGSEGCTEHYEDVYYLGCW
>Mature_204_residues
MFQVLRRYLSASVGLGCLMGQMICAPAQANPVGIQFQGAANAVFVAQQLGFPPVPPNTGIIGPFSDDQGLIYLDAQGRIS
YFSPSQVTVFFAQANANNGPKILYALTPTATYRMQNNQAIAVDPNTIEAAITPWPYSGVMVNVLIAYLQQYQAQLMASGG
VTVSAEQQSYVSSMLHNTSMNILNNIGSEGCTEHYEDVYYLGCW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22049; Mature: 22049

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQVLRRYLSASVGLGCLMGQMICAPAQANPVGIQFQGAANAVFVAQQLGFPPVPPNTGI
CHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEHHCCCCCCCCCCCE
IGPFSDDQGLIYLDAQGRISYFSPSQVTVFFAQANANNGPKILYALTPTATYRMQNNQAI
ECCCCCCCCEEEEECCCCEEEECCCEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCEE
AVDPNTIEAAITPWPYSGVMVNVLIAYLQQYQAQLMASGGVTVSAEQQSYVSSMLHNTSM
EECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHH
NILNNIGSEGCTEHYEDVYYLGCW
HHHHHCCCCCCHHHCCCEEEEECC
>Mature Secondary Structure
MFQVLRRYLSASVGLGCLMGQMICAPAQANPVGIQFQGAANAVFVAQQLGFPPVPPNTGI
CHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEHHCCCCCCCCCCCE
IGPFSDDQGLIYLDAQGRISYFSPSQVTVFFAQANANNGPKILYALTPTATYRMQNNQAI
ECCCCCCCCEEEEECCCCEEEECCCEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCEE
AVDPNTIEAAITPWPYSGVMVNVLIAYLQQYQAQLMASGGVTVSAEQQSYVSSMLHNTSM
EECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHH
NILNNIGSEGCTEHYEDVYYLGCW
HHHHHCCCCCCHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA