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The map label for this gene is spoVD [H]

Identifier: 170078895

GI number: 170078895

Start: 2379243

End: 2381168

Strand: Direct

Name: spoVD [H]

Synonym: SYNPCC7002_A2300

Alternate gene names: 170078895

Gene position: 2379243-2381168 (Clockwise)

Preceding gene: 170078894

Following gene: 170078896

Centisome position: 79.1

GC content: 55.35

Gene sequence:

>1926_bases
ATGACCATGCCTTCCCCCCACTCCCACCAACAACGACGGCAACTGTATCGGCGCAAGCAACAAGCCATCCGGTCTCGGCC
GCCCGCACCGAAGCTGCTCCAACGGCGTTTATTCCTCATCTGGGGCATTTTTGTGGTGGGGTTATTGGCTTTGGCTGTCC
GGGTGTTCTACCTACAGATCATTGACTACGACAAGCTAGGGGCGATCGCCCAGTCCCAGCATCAGATTACCCTCCGTCCC
TATATTCCCCGACGCACCATCGTTGACCGCGAAGGGAATATCCTGGCCCTAGACCGCATTTCCCATACCCTCTACGCCCA
CCCCGTCGGTTTCCGACTTCCCCAGGAGCTAGTAGACAATCTCCCGGAGGCGATCGCCCCCACAGACCTCCCGAAGGCCG
TTGCCCATTATCTCGCTCCTATTTTGGGGGATGTTTCCCCCGCAGACCTAGAGACCACCTTACGCCGCCAAAAAAGCGGG
ATCTTGTTGCGGGCCAGCCTCGACGCCACCAAGGTCAGCGCCATTCGCCAATTACGTATTGATGGCCTGGAACTGGTGGA
ACGATACGGTCGGTTCTATCCCCAGGGGGACGCAACCGCAGAAATTACCGGCTATGTCCAAAAAGACGACCACCTGGGCC
GGGCTGGCATTGAACTTGCCCAGGAAAGCTTAATCCAACGGGAGCCCATTTCCCTGAGTCTCCGGCGCAATGGCAATGGG
GCGATCCTGCCGGGGAACCTCCAGGCAGAGGCGATGAAATATGATGACTGGGAATTGGAACTGTCCCTCGATCTCCCCCT
CCAAAAGGCCGCCCGCCAAGCCCTGCAAAAACAGATGGCTGCCTACAAAGCGAAACGGGGTGTTGTCATTGTCATGGATG
CCCAGTCTGGGGAACTGCTGAGTCTGGTGACAGAACCCAACTACGATCCCAACAATTACGCCCAAGTTCAGCCTGAAAAT
TATGGTGTTTTTAAAAATTGGGCAGTCACAGATCTCTATGAACCGGGGTCTACCTTTAAACCGATCAATGTCGCCCTCGC
CCTCGATGCCGGGGTGATTACCCCCAACACGTCAGTGAATGATCCGGGATCAATTCAGGTTGGCCCCCACCGGATGAAAA
ACTACAACGGTGCCGGAAACGGTGTGATTGATGTGGCGGGGATTTTGCGGGTTTCTAGTAATGTGGGGATGATTCAGTTG
ATGCAAAATCTGTCCCGGGATGATTATTATGACCGACTGCAAAGCTTGAGACTCACCAAGCCCACAGGCATTGATCTACC
GGGGGAAGTGACAGGCACCCTCAAGAGTCGCGAAAAATTTACCGCTAGCCCCGTCGAAGCAGCCGTGAATTCCTTTGGCC
AAGGGTTAACTGTGACGCCCATCAAGCTGGTGCAACTCCACGGGGCGATCGCCAATGGCGGTACCCTCGTCGAACCCCAT
CTGGTGCGGGGACTATTCAACAGCCAAGGAGAACCCCAAACCGTCACTCCCAAAGCAGAAATCCCCAACAGTGCCCAGCA
GCTTGCGGCAACAACGACAGCCTCGGAGAACCCACAAATTTTTTCCCCGGCGGTGGCGAGAACTGTACTCGACATGATGG
AAACTGTTGTGGACGATGGCAGTGGCGAAAAATCAAAAATTGCCGGCTATCGGATTGGTGGGAAAACAGGCACGGCCCAA
AAAGCGCGCAACGGCCAATATATTCCGGGAGCCTACATCACAAGCTTCGTCAGTATCTTCCCCATCGATAATCCCCGCTA
TGTGGTCTTTGCCGCTGCCGATGAACCCACAGAGCCCAATTCCTTTGGGGGGACTGTCGCCGCTCCCGTCGTTCATGATG
TGCTCCAGGCCCTAATTGTCCGCGAAAAAATCCCTCCTACTGGCCCTACAGTGGTACCAGAAGATTCCACAGAAACATCC
CCCTAA

Upstream 100 bases:

>100_bases
TCTCCCCCACGTCCGCGAACAATCTCCCATTGGCTATTAATCATTGGTTTCTTGGTAGAGTGTTGAGCAGATTTGCCCTT
AGCAATCAGGGGTCAAACCG

Downstream 100 bases:

>100_bases
GGAAAAACCAATTACAATTCCCGACACCGCGATAATTGCAGGAATTTCTGGAGAAATTCTGTGTATCCCGCAACCGCTGG
TTCCTTGAAGGGATACACTA

Product: penicillin-binding protein

Products: NA

Alternate protein names: Sporulation-specific penicillin-binding protein [H]

Number of amino acids: Translated: 641; Mature: 640

Protein sequence:

>641_residues
MTMPSPHSHQQRRQLYRRKQQAIRSRPPAPKLLQRRLFLIWGIFVVGLLALAVRVFYLQIIDYDKLGAIAQSQHQITLRP
YIPRRTIVDREGNILALDRISHTLYAHPVGFRLPQELVDNLPEAIAPTDLPKAVAHYLAPILGDVSPADLETTLRRQKSG
ILLRASLDATKVSAIRQLRIDGLELVERYGRFYPQGDATAEITGYVQKDDHLGRAGIELAQESLIQREPISLSLRRNGNG
AILPGNLQAEAMKYDDWELELSLDLPLQKAARQALQKQMAAYKAKRGVVIVMDAQSGELLSLVTEPNYDPNNYAQVQPEN
YGVFKNWAVTDLYEPGSTFKPINVALALDAGVITPNTSVNDPGSIQVGPHRMKNYNGAGNGVIDVAGILRVSSNVGMIQL
MQNLSRDDYYDRLQSLRLTKPTGIDLPGEVTGTLKSREKFTASPVEAAVNSFGQGLTVTPIKLVQLHGAIANGGTLVEPH
LVRGLFNSQGEPQTVTPKAEIPNSAQQLAATTTASENPQIFSPAVARTVLDMMETVVDDGSGEKSKIAGYRIGGKTGTAQ
KARNGQYIPGAYITSFVSIFPIDNPRYVVFAAADEPTEPNSFGGTVAAPVVHDVLQALIVREKIPPTGPTVVPEDSTETS
P

Sequences:

>Translated_641_residues
MTMPSPHSHQQRRQLYRRKQQAIRSRPPAPKLLQRRLFLIWGIFVVGLLALAVRVFYLQIIDYDKLGAIAQSQHQITLRP
YIPRRTIVDREGNILALDRISHTLYAHPVGFRLPQELVDNLPEAIAPTDLPKAVAHYLAPILGDVSPADLETTLRRQKSG
ILLRASLDATKVSAIRQLRIDGLELVERYGRFYPQGDATAEITGYVQKDDHLGRAGIELAQESLIQREPISLSLRRNGNG
AILPGNLQAEAMKYDDWELELSLDLPLQKAARQALQKQMAAYKAKRGVVIVMDAQSGELLSLVTEPNYDPNNYAQVQPEN
YGVFKNWAVTDLYEPGSTFKPINVALALDAGVITPNTSVNDPGSIQVGPHRMKNYNGAGNGVIDVAGILRVSSNVGMIQL
MQNLSRDDYYDRLQSLRLTKPTGIDLPGEVTGTLKSREKFTASPVEAAVNSFGQGLTVTPIKLVQLHGAIANGGTLVEPH
LVRGLFNSQGEPQTVTPKAEIPNSAQQLAATTTASENPQIFSPAVARTVLDMMETVVDDGSGEKSKIAGYRIGGKTGTAQ
KARNGQYIPGAYITSFVSIFPIDNPRYVVFAAADEPTEPNSFGGTVAAPVVHDVLQALIVREKIPPTGPTVVPEDSTETS
P
>Mature_640_residues
TMPSPHSHQQRRQLYRRKQQAIRSRPPAPKLLQRRLFLIWGIFVVGLLALAVRVFYLQIIDYDKLGAIAQSQHQITLRPY
IPRRTIVDREGNILALDRISHTLYAHPVGFRLPQELVDNLPEAIAPTDLPKAVAHYLAPILGDVSPADLETTLRRQKSGI
LLRASLDATKVSAIRQLRIDGLELVERYGRFYPQGDATAEITGYVQKDDHLGRAGIELAQESLIQREPISLSLRRNGNGA
ILPGNLQAEAMKYDDWELELSLDLPLQKAARQALQKQMAAYKAKRGVVIVMDAQSGELLSLVTEPNYDPNNYAQVQPENY
GVFKNWAVTDLYEPGSTFKPINVALALDAGVITPNTSVNDPGSIQVGPHRMKNYNGAGNGVIDVAGILRVSSNVGMIQLM
QNLSRDDYYDRLQSLRLTKPTGIDLPGEVTGTLKSREKFTASPVEAAVNSFGQGLTVTPIKLVQLHGAIANGGTLVEPHL
VRGLFNSQGEPQTVTPKAEIPNSAQQLAATTTASENPQIFSPAVARTVLDMMETVVDDGSGEKSKIAGYRIGGKTGTAQK
ARNGQYIPGAYITSFVSIFPIDNPRYVVFAAADEPTEPNSFGGTVAAPVVHDVLQALIVREKIPPTGPTVVPEDSTETSP

Specific function: Penicillin-binding protein with an unknown catalytic activity. May have a specialized role in the morphogenesis of spore cortex, which is a modified form of peptidoglycan. Pore cortex formation is determined primarily by the mother cell [H]

COG id: COG0768

COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PASTA domain [H]

Homologues:

Organism=Escherichia coli, GI1786272, Length=616, Percent_Identity=27.4350649350649, Blast_Score=197, Evalue=2e-51,
Organism=Escherichia coli, GI1786854, Length=590, Percent_Identity=25.0847457627119, Blast_Score=124, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR005543
- InterPro:   IPR005311
- InterPro:   IPR001460
- InterPro:   IPR011927 [H]

Pfam domain/function: PF03793 PASTA; PF03717 PBP_dimer; PF00905 Transpeptidase [H]

EC number: NA

Molecular weight: Translated: 69967; Mature: 69836

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMPSPHSHQQRRQLYRRKQQAIRSRPPAPKLLQRRLFLIWGIFVVGLLALAVRVFYLQI
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDYDKLGAIAQSQHQITLRPYIPRRTIVDREGNILALDRISHTLYAHPVGFRLPQELVDN
HCCHHHHHHHCCCCEEEEECCCCCCCEECCCCCEEEEECCCHHHEECCCCCCCHHHHHHC
LPEAIAPTDLPKAVAHYLAPILGDVSPADLETTLRRQKSGILLRASLDATKVSAIRQLRI
CHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHC
DGLELVERYGRFYPQGDATAEITGYVQKDDHLGRAGIELAQESLIQREPISLSLRRNGNG
CHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC
AILPGNLQAEAMKYDDWELELSLDLPLQKAARQALQKQMAAYKAKRGVVIVMDAQSGELL
CEECCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEE
SLVTEPNYDPNNYAQVQPENYGVFKNWAVTDLYEPGSTFKPINVALALDAGVITPNTSVN
EEEECCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCEECCCCCCC
DPGSIQVGPHRMKNYNGAGNGVIDVAGILRVSSNVGMIQLMQNLSRDDYYDRLQSLRLTK
CCCCEEECHHHHCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCCC
PTGIDLPGEVTGTLKSREKFTASPVEAAVNSFGQGLTVTPIKLVQLHGAIANGGTLVEPH
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEECCEEEEEEHHHCCCCCEEECHH
LVRGLFNSQGEPQTVTPKAEIPNSAQQLAATTTASENPQIFSPAVARTVLDMMETVVDDG
HHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHCCC
SGEKSKIAGYRIGGKTGTAQKARNGQYIPGAYITSFVSIFPIDNPRYVVFAAADEPTEPN
CCCCCCCCEEEECCCCCCHHHCCCCCCCCHHHHHHHHHEEECCCCCEEEEEECCCCCCCC
SFGGTVAAPVVHDVLQALIVREKIPPTGPTVVPEDSTETSP
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure 
TMPSPHSHQQRRQLYRRKQQAIRSRPPAPKLLQRRLFLIWGIFVVGLLALAVRVFYLQI
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDYDKLGAIAQSQHQITLRPYIPRRTIVDREGNILALDRISHTLYAHPVGFRLPQELVDN
HCCHHHHHHHCCCCEEEEECCCCCCCEECCCCCEEEEECCCHHHEECCCCCCCHHHHHHC
LPEAIAPTDLPKAVAHYLAPILGDVSPADLETTLRRQKSGILLRASLDATKVSAIRQLRI
CHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHC
DGLELVERYGRFYPQGDATAEITGYVQKDDHLGRAGIELAQESLIQREPISLSLRRNGNG
CHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC
AILPGNLQAEAMKYDDWELELSLDLPLQKAARQALQKQMAAYKAKRGVVIVMDAQSGELL
CEECCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEE
SLVTEPNYDPNNYAQVQPENYGVFKNWAVTDLYEPGSTFKPINVALALDAGVITPNTSVN
EEEECCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCEECCCCCCC
DPGSIQVGPHRMKNYNGAGNGVIDVAGILRVSSNVGMIQLMQNLSRDDYYDRLQSLRLTK
CCCCEEECHHHHCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCCC
PTGIDLPGEVTGTLKSREKFTASPVEAAVNSFGQGLTVTPIKLVQLHGAIANGGTLVEPH
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEECCEEEEEEHHHCCCCCEEECHH
LVRGLFNSQGEPQTVTPKAEIPNSAQQLAATTTASENPQIFSPAVARTVLDMMETVVDDG
HHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHCCC
SGEKSKIAGYRIGGKTGTAQKARNGQYIPGAYITSFVSIFPIDNPRYVVFAAADEPTEPN
CCCCCCCCEEEECCCCCCHHHCCCCCCCCHHHHHHHHHEEECCCCCEEEEEECCCCCCCC
SFGGTVAAPVVHDVLQALIVREKIPPTGPTVVPEDSTETSP
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8289242; 9384377; 8244929; 8436954 [H]