Click here to switch to the map view.

The map label for this gene is 170078893

Identifier: 170078893

GI number: 170078893

Start: 2376944

End: 2378479

Strand: Direct

Name: 170078893

Synonym: SYNPCC7002_A2298

Alternate gene names: NA

Gene position: 2376944-2378479 (Clockwise)

Preceding gene: 170078892

Following gene: 170078894

Centisome position: 79.02

GC content: 52.73

Gene sequence:

>1536_bases
ATGACCGTCGGGATTTGGGTACTGGGGGATCAACTGTGGGCCACCCAGGCCGCCCTCCAACAACGGGAAGACCAACGCTC
AACAACGCCGGTTCTGTTGATCGAAGCGGCAGACTATGCCCGCCAACGGCCCTACCACGGTCAAAAGTTGGTGCTGGTTT
GGTCGGCCATGCGTCACTTTGCCCAGGAGTTAGAACAGGCCGGCTGGTCTGTGCATTATGCGATCGCCGCTGATTTTCAA
AGTGCCCTAACCGACTGGATTGCCACTGCGGGGATCACGGAATTGTGGGTGATGCAGCCGAGCGATCGCCCCTTTGAAAC
TTTTATCCAGACCTTAGATCTCCCCTGTTCCCTCAAGTTCATTCCTAATAATCACTTCCTGTGGTCGCGGGCAGAATTTC
ACAACTGGGCCAAGAATCGTAAACGCCTCGTCCTCGAAGACTTTTATCGGGCGGGTCGCAAACGGTTTAAGATCCTGCTC
GATGAAGCACAGCAACCCCTTGGGGGTCAGTGGAACTTTGATAAAGACAACCGCAAACCGCCCAAGAAAGACCTCAATCC
TCCCCAACCGCTAACCTTTGCGCCCGATGAGCTGACCCAAGCCGTGATCAACCGGGTTAAAGCTTTAGGTCTTGTCACCT
ACGGGCAGCTTGAACTTTTCCGTTGGGCCGTGACCCGCACCCAAGCCCTCCAGGTCTTTGAGCATTTCCTCGCTACGGGC
TTAGAAAAATTTGGCACCTTCCAAGATGCGATGGTCACGGGGGAATATACCCTCTGGCATGGTCTGATTTCGCCCTATCT
CAATCTGGGTCTGTTGCATCCCTGGGAATTGATCAAAAAAGCAGAGGCAATCCGAGAACAAAAGGCGATCGCCCTCAATA
ATCTCGAAGGTTTTATCCGGCAAATTTTGGGCTGGCGGGAATATCTCCATGGTCTTTACCATTACGTGGGCGCTGATTAT
GCCCAGAAAAACCATTTCAACCACCAACAGCCCCTGCCCGATTTTTATTGGGACAGCCGCAAAACCGATCTCAACTGCCT
CAAACAAGTCTTACAACAAGTAGAACAAACGGGCTATGCCCACCATATCCAACGCTTGATGATCCTCAGCAATTTTGCCT
TGATCTTGGGGGTCAAGCCTCAGGCCCTAGAAGCTTGGTTTCACGCCGCGTTTATCGATGCCTACGATTGGGTAATGCAA
ACCAATGTCATCGGCATGGGGCAGTTTGCTGACGGGGGAATCCTTGCCAGTAAGCCCTACGCTGCCTCGGCCAACTACAT
CAATAAAATGAGTGATTACTGCCGCGACTGTCGCTACCACAAAGGCGATCGCCACGGAGAAAATGCCTGTCCTTTCAATA
CCCTCTACTGGCACTTCCTCGACCGTCACCAAGGTCAACTCCGCAGCCAAGGTCGGATGAATTTAATCCTCAAAAATTTA
GAACGGCTCTCCCCAGATGAATTGCAGGCCATCCGCGCCCAGGGCCAAACTTGGCAAAACCGCCTAAAGCCCGCTCCACA
AGGGGAACTACCATAG

Upstream 100 bases:

>100_bases
CAGGTTCATAGAAATTTAATTGTCTTGGAATTAAGCTGCCGTCGCCGCAAAAAAGCTTGTGTTAGACTCTCCAACAGCAT
TTTTCGGGAGAGAAAAACCC

Downstream 100 bases:

>100_bases
GCGATCGCCACCGATTGTTCGCCATAACCACTTCATAAAAATCATAAAAATCAGGGAACTTTTTTTGCCCATTGATATTT
TTCTTTATATTTTTCTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MTVGIWVLGDQLWATQAALQQREDQRSTTPVLLIEAADYARQRPYHGQKLVLVWSAMRHFAQELEQAGWSVHYAIAADFQ
SALTDWIATAGITELWVMQPSDRPFETFIQTLDLPCSLKFIPNNHFLWSRAEFHNWAKNRKRLVLEDFYRAGRKRFKILL
DEAQQPLGGQWNFDKDNRKPPKKDLNPPQPLTFAPDELTQAVINRVKALGLVTYGQLELFRWAVTRTQALQVFEHFLATG
LEKFGTFQDAMVTGEYTLWHGLISPYLNLGLLHPWELIKKAEAIREQKAIALNNLEGFIRQILGWREYLHGLYHYVGADY
AQKNHFNHQQPLPDFYWDSRKTDLNCLKQVLQQVEQTGYAHHIQRLMILSNFALILGVKPQALEAWFHAAFIDAYDWVMQ
TNVIGMGQFADGGILASKPYAASANYINKMSDYCRDCRYHKGDRHGENACPFNTLYWHFLDRHQGQLRSQGRMNLILKNL
ERLSPDELQAIRAQGQTWQNRLKPAPQGELP

Sequences:

>Translated_511_residues
MTVGIWVLGDQLWATQAALQQREDQRSTTPVLLIEAADYARQRPYHGQKLVLVWSAMRHFAQELEQAGWSVHYAIAADFQ
SALTDWIATAGITELWVMQPSDRPFETFIQTLDLPCSLKFIPNNHFLWSRAEFHNWAKNRKRLVLEDFYRAGRKRFKILL
DEAQQPLGGQWNFDKDNRKPPKKDLNPPQPLTFAPDELTQAVINRVKALGLVTYGQLELFRWAVTRTQALQVFEHFLATG
LEKFGTFQDAMVTGEYTLWHGLISPYLNLGLLHPWELIKKAEAIREQKAIALNNLEGFIRQILGWREYLHGLYHYVGADY
AQKNHFNHQQPLPDFYWDSRKTDLNCLKQVLQQVEQTGYAHHIQRLMILSNFALILGVKPQALEAWFHAAFIDAYDWVMQ
TNVIGMGQFADGGILASKPYAASANYINKMSDYCRDCRYHKGDRHGENACPFNTLYWHFLDRHQGQLRSQGRMNLILKNL
ERLSPDELQAIRAQGQTWQNRLKPAPQGELP
>Mature_510_residues
TVGIWVLGDQLWATQAALQQREDQRSTTPVLLIEAADYARQRPYHGQKLVLVWSAMRHFAQELEQAGWSVHYAIAADFQS
ALTDWIATAGITELWVMQPSDRPFETFIQTLDLPCSLKFIPNNHFLWSRAEFHNWAKNRKRLVLEDFYRAGRKRFKILLD
EAQQPLGGQWNFDKDNRKPPKKDLNPPQPLTFAPDELTQAVINRVKALGLVTYGQLELFRWAVTRTQALQVFEHFLATGL
EKFGTFQDAMVTGEYTLWHGLISPYLNLGLLHPWELIKKAEAIREQKAIALNNLEGFIRQILGWREYLHGLYHYVGADYA
QKNHFNHQQPLPDFYWDSRKTDLNCLKQVLQQVEQTGYAHHIQRLMILSNFALILGVKPQALEAWFHAAFIDAYDWVMQT
NVIGMGQFADGGILASKPYAASANYINKMSDYCRDCRYHKGDRHGENACPFNTLYWHFLDRHQGQLRSQGRMNLILKNLE
RLSPDELQAIRAQGQTWQNRLKPAPQGELP

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59184; Mature: 59053

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVGIWVLGDQLWATQAALQQREDQRSTTPVLLIEAADYARQRPYHGQKLVLVWSAMRHF
CEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHH
AQELEQAGWSVHYAIAADFQSALTDWIATAGITELWVMQPSDRPFETFIQTLDLPCSLKF
HHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCHHEEEECCCCCHHHHHHHHHCCCEEEEE
IPNNHFLWSRAEFHNWAKNRKRLVLEDFYRAGRKRFKILLDEAQQPLGGQWNFDKDNRKP
CCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PKKDLNPPQPLTFAPDELTQAVINRVKALGLVTYGQLELFRWAVTRTQALQVFEHFLATG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKFGTFQDAMVTGEYTLWHGLISPYLNLGLLHPWELIKKAEAIREQKAIALNNLEGFIR
HHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QILGWREYLHGLYHYVGADYAQKNHFNHQQPLPDFYWDSRKTDLNCLKQVLQQVEQTGYA
HHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCHH
HHIQRLMILSNFALILGVKPQALEAWFHAAFIDAYDWVMQTNVIGMGQFADGGILASKPY
HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCC
AASANYINKMSDYCRDCRYHKGDRHGENACPFNTLYWHFLDRHQGQLRSQGRMNLILKNL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ERLSPDELQAIRAQGQTWQNRLKPAPQGELP
HHCCHHHHHHHHHCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TVGIWVLGDQLWATQAALQQREDQRSTTPVLLIEAADYARQRPYHGQKLVLVWSAMRHF
EEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHH
AQELEQAGWSVHYAIAADFQSALTDWIATAGITELWVMQPSDRPFETFIQTLDLPCSLKF
HHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCHHEEEECCCCCHHHHHHHHHCCCEEEEE
IPNNHFLWSRAEFHNWAKNRKRLVLEDFYRAGRKRFKILLDEAQQPLGGQWNFDKDNRKP
CCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PKKDLNPPQPLTFAPDELTQAVINRVKALGLVTYGQLELFRWAVTRTQALQVFEHFLATG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKFGTFQDAMVTGEYTLWHGLISPYLNLGLLHPWELIKKAEAIREQKAIALNNLEGFIR
HHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QILGWREYLHGLYHYVGADYAQKNHFNHQQPLPDFYWDSRKTDLNCLKQVLQQVEQTGYA
HHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCHH
HHIQRLMILSNFALILGVKPQALEAWFHAAFIDAYDWVMQTNVIGMGQFADGGILASKPY
HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEECCCC
AASANYINKMSDYCRDCRYHKGDRHGENACPFNTLYWHFLDRHQGQLRSQGRMNLILKNL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ERLSPDELQAIRAQGQTWQNRLKPAPQGELP
HHCCHHHHHHHHHCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA