Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078886

Identifier: 170078886

GI number: 170078886

Start: 2371841

End: 2372140

Strand: Reverse

Name: 170078886

Synonym: SYNPCC7002_A2290

Alternate gene names: NA

Gene position: 2372140-2371841 (Counterclockwise)

Preceding gene: 170078887

Following gene: 170078885

Centisome position: 78.86

GC content: 47.67

Gene sequence:

>300_bases
ATGGCTAGCACAATTCAAATCGAAAAACTCGCCGCAGAGATTGGTGAAAATATTTATATCGATGTGTCTGGGTGGCATTT
ATATTTAGCCGATGCCCATTTACACACCACCGTCGCTGAGAAAATTTTCCCGGCCATTGAAGACCGTACAGTGGACGAAG
CAAAAGTGATGGATGTTTTACGCTCGATCCAAGTTCCCCTGGGTGGTAAACAAGCTTTTGTCACCCTGGCCCAACTGATC
CCCACCGCCGGCCAAGGGGATCTGCTCAAGCTCCTCGAAGACTATCAAGACAATTGGTAA

Upstream 100 bases:

>100_bases
GAGCGTCCCTGGGTAAAACCGTTTAGCCTTGTTTGGCTGGGCATTCTAGGGTTACACCTGCTTTACATTACGGCGATCGC
CGATTATTCGGAGGCTTCCA

Downstream 100 bases:

>100_bases
ATTAAAGCGATCAATGGCAGAAATTATTCTGTTAGAAAATGCAGCCGCCACCCAAGCTCTTGGGGTAAAGCTAGGGCAAA
GGTTGCCAGAAAATTCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MASTIQIEKLAAEIGENIYIDVSGWHLYLADAHLHTTVAEKIFPAIEDRTVDEAKVMDVLRSIQVPLGGKQAFVTLAQLI
PTAGQGDLLKLLEDYQDNW

Sequences:

>Translated_99_residues
MASTIQIEKLAAEIGENIYIDVSGWHLYLADAHLHTTVAEKIFPAIEDRTVDEAKVMDVLRSIQVPLGGKQAFVTLAQLI
PTAGQGDLLKLLEDYQDNW
>Mature_98_residues
ASTIQIEKLAAEIGENIYIDVSGWHLYLADAHLHTTVAEKIFPAIEDRTVDEAKVMDVLRSIQVPLGGKQAFVTLAQLIP
TAGQGDLLKLLEDYQDNW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021518 [H]

Pfam domain/function: PF11378 DUF3181 [H]

EC number: NA

Molecular weight: Translated: 10977; Mature: 10845

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTIQIEKLAAEIGENIYIDVSGWHLYLADAHLHTTVAEKIFPAIEDRTVDEAKVMDVL
CCCCHHHHHHHHHHCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RSIQVPLGGKQAFVTLAQLIPTAGQGDLLKLLEDYQDNW
HHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
ASTIQIEKLAAEIGENIYIDVSGWHLYLADAHLHTTVAEKIFPAIEDRTVDEAKVMDVL
CCCHHHHHHHHHHCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RSIQVPLGGKQAFVTLAQLIPTAGQGDLLKLLEDYQDNW
HHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]