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The map label for this gene is clpS [H]

Identifier: 170078877

GI number: 170078877

Start: 2364048

End: 2364335

Strand: Direct

Name: clpS [H]

Synonym: SYNPCC7002_A2281

Alternate gene names: 170078877

Gene position: 2364048-2364335 (Clockwise)

Preceding gene: 170078866

Following gene: 170078878

Centisome position: 78.59

GC content: 55.21

Gene sequence:

>288_bases
ATGTCTACCGGTGTGATCGAACAACGTTCCACTTCGACCATCCGTAAACCAGCCCCCCGCTACCGGGTACTGCTCCATAA
CGACGACTTTAACTCCATGGAACATGTGGTACAGACCTTGATGCAAACGGTGGCCGGTCTGACCCAACCCCAGGCGGTCA
GTATCATGATGGAAGCCCACACCAACGGCATTGCCCTGGTGATCACCTGTGTGCAGGAGCACGCGGAATTTTATTGTGAA
ACCCTGAAAATGCACGGCCTCACCAGCACCATCGAGCCGGACGAGTAG

Upstream 100 bases:

>100_bases
TTGTGACATTGTTTACTGCGGCAAAAACTCAACAGTTGCCGAGACAGTAAAAGTTCATCTTTTCCCTTGAATCCAATATT
GCCTAGGAGGTTTCTTCATC

Downstream 100 bases:

>100_bases
AGATATTTTGCTTTTTTGATCAAGGCGATCGCCAGATTGCGGCCCAGAAACAGATTAAATAGAAGGTGGCAAACCTCAAC
GACTTTTTCCCTTGAAACGA

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSTGVIEQRSTSTIRKPAPRYRVLLHNDDFNSMEHVVQTLMQTVAGLTQPQAVSIMMEAHTNGIALVITCVQEHAEFYCE
TLKMHGLTSTIEPDE

Sequences:

>Translated_95_residues
MSTGVIEQRSTSTIRKPAPRYRVLLHNDDFNSMEHVVQTLMQTVAGLTQPQAVSIMMEAHTNGIALVITCVQEHAEFYCE
TLKMHGLTSTIEPDE
>Mature_94_residues
STGVIEQRSTSTIRKPAPRYRVLLHNDDFNSMEHVVQTLMQTVAGLTQPQAVSIMMEAHTNGIALVITCVQEHAEFYCET
LKMHGLTSTIEPDE

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 10630; Mature: 10499

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTGVIEQRSTSTIRKPAPRYRVLLHNDDFNSMEHVVQTLMQTVAGLTQPQAVSIMMEAH
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEECC
TNGIALVITCVQEHAEFYCETLKMHGLTSTIEPDE
CCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
STGVIEQRSTSTIRKPAPRYRVLLHNDDFNSMEHVVQTLMQTVAGLTQPQAVSIMMEAH
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEECC
TNGIALVITCVQEHAEFYCETLKMHGLTSTIEPDE
CCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA