| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078805
Identifier: 170078805
GI number: 170078805
Start: 2297617
End: 2297859
Strand: Direct
Name: 170078805
Synonym: SYNPCC7002_A2207
Alternate gene names: NA
Gene position: 2297617-2297859 (Clockwise)
Preceding gene: 170078802
Following gene: 170078806
Centisome position: 76.38
GC content: 55.97
Gene sequence:
>243_bases ATGTCCGCGATCGCCGTTCACTTTATGCCCAATGATGTTACCGTCACCGCCACCGCAGGGGAACCGATGATCGAAGTGGC ACGGCGGGCTGGGGTGGCGATCCCCACAGGCTGCTTGATGGGCTCATGCCATGCTTGCGAAGTGGAATTAGACGATGGTA CAAATCTCTGTGCTTGCATTAGTGGCATCCCTGGCGATCGCCCTGAAATCACCATCCATCTCTTCAGTGACCCCGTTTGG TAA
Upstream 100 bases:
>100_bases GGTCCCTAAAATGTTTTCCGTTGGAATTCTTGTCGCCTGTGGTTAGTGGGAATTTCCTAGTTTAGTTTATTGTCTTCAAC TCCTGGAGTTTTACGCTTTT
Downstream 100 bases:
>100_bases ATTGCAGCAGTCTTAGAACAGACCTTCCAAAAAGCCTGTGTCGTAAGGGTTAGAGCTATTCTAATTCTCCCTTTAATCTG TCTGAAGCGTATCATTTTAT
Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
Products: NA
Alternate protein names: NAD-Reducing Hydrogenase Gamma; NAD-Reducing Hydrogenase Gamma Subunit-Like-Protein; Ferrodoxin
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSAIAVHFMPNDVTVTATAGEPMIEVARRAGVAIPTGCLMGSCHACEVELDDGTNLCACISGIPGDRPEITIHLFSDPVW
Sequences:
>Translated_80_residues MSAIAVHFMPNDVTVTATAGEPMIEVARRAGVAIPTGCLMGSCHACEVELDDGTNLCACISGIPGDRPEITIHLFSDPVW >Mature_79_residues SAIAVHFMPNDVTVTATAGEPMIEVARRAGVAIPTGCLMGSCHACEVELDDGTNLCACISGIPGDRPEITIHLFSDPVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8384; Mature: 8253
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 11.2 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIAVHFMPNDVTVTATAGEPMIEVARRAGVAIPTGCLMGSCHACEVELDDGTNLCACI CCEEEEEEECCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEE SGIPGDRPEITIHLFSDPVW CCCCCCCCEEEEEEECCCCC >Mature Secondary Structure SAIAVHFMPNDVTVTATAGEPMIEVARRAGVAIPTGCLMGSCHACEVELDDGTNLCACI CEEEEEEECCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEE SGIPGDRPEITIHLFSDPVW CCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA