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The map label for this gene is iap [H]

Identifier: 170078782

GI number: 170078782

Start: 2274202

End: 2274900

Strand: Direct

Name: iap [H]

Synonym: SYNPCC7002_A2184

Alternate gene names: 170078782

Gene position: 2274202-2274900 (Clockwise)

Preceding gene: 170078781

Following gene: 170078783

Centisome position: 75.6

GC content: 52.07

Gene sequence:

>699_bases
ATGCAACTGTCCCCTTCTCCCAGTGGTGAATACTTTTGCCTGCAAACCCTCGATCTATACGACGACGCCGAATGTCAGTC
CCTCGGTACCCAAGCTGCCGCTGGTCGTCGGGTGCAAATGCTCAATAAAGAAACAGACCAGGCTGTGCGGGTGATGACCG
TCGAAGATGGCTACTGTACCTGGCTCAAAAAAGCAGATTTACGACACCTCGAAGTCGCCGAAGAACCCTACGAATTTGTC
CCCGTTGATCGTCCAGAAATCGAAGCGCGCATGGAAAATATTTTGATCTTTGCCCATGCTGCAAAGCGGGTGAGTAATAC
CTATCTGTGGGGGGGCACCACCGCGCCGAATTATGATTGTTCTGGATTTATCCAGGCGGCCTACGCTTCCCAGGGGATTT
GGTTACCGCGCAACTCTTATCAACAGGGGGATTTTGTTGAACCTGTGTCCCAAGAAGAATTGGAACTCGGCGATTTAATT
TTCTTTGCCAAAGAGCAACGCATTGATCACGTCGCCCTATACCTCGGGGAGGGCTATTATATCCATAGCTCCGGCATCGA
GATGGGCCGCAATGGCATTGGCATCGATCGCCTCTGGGAGCCGTGGGATATGATTAGCCGCGCCTACCACCAGACCCTCT
GCGGTTTTGGTCGCGTCATGGAAAGTTACGCCCCACCGTCCTTAGCTTGTCAAATTTAA

Upstream 100 bases:

>100_bases
GCTGCACCGGGCCGAGGTCAGGATAGAATAGGCGGCAAAGACGGCTGCACCGTTGATTTCTCTCCTCCCGCATCCATCCC
CCCTAACCCCTTTGAAATCT

Downstream 100 bases:

>100_bases
CCACCATTGATGTCTAGTCCTGCCCCGATTACCGAAGCGCCTACCACGACTCAAACTCTGTCGATTGTGGTGCCCATCTA
CAACGAAGTGGAAAGTCTGC

Product: NlpC/P60 family protein

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MQLSPSPSGEYFCLQTLDLYDDAECQSLGTQAAAGRRVQMLNKETDQAVRVMTVEDGYCTWLKKADLRHLEVAEEPYEFV
PVDRPEIEARMENILIFAHAAKRVSNTYLWGGTTAPNYDCSGFIQAAYASQGIWLPRNSYQQGDFVEPVSQEELELGDLI
FFAKEQRIDHVALYLGEGYYIHSSGIEMGRNGIGIDRLWEPWDMISRAYHQTLCGFGRVMESYAPPSLACQI

Sequences:

>Translated_232_residues
MQLSPSPSGEYFCLQTLDLYDDAECQSLGTQAAAGRRVQMLNKETDQAVRVMTVEDGYCTWLKKADLRHLEVAEEPYEFV
PVDRPEIEARMENILIFAHAAKRVSNTYLWGGTTAPNYDCSGFIQAAYASQGIWLPRNSYQQGDFVEPVSQEELELGDLI
FFAKEQRIDHVALYLGEGYYIHSSGIEMGRNGIGIDRLWEPWDMISRAYHQTLCGFGRVMESYAPPSLACQI
>Mature_232_residues
MQLSPSPSGEYFCLQTLDLYDDAECQSLGTQAAAGRRVQMLNKETDQAVRVMTVEDGYCTWLKKADLRHLEVAEEPYEFV
PVDRPEIEARMENILIFAHAAKRVSNTYLWGGTTAPNYDCSGFIQAAYASQGIWLPRNSYQQGDFVEPVSQEELELGDLI
FFAKEQRIDHVALYLGEGYYIHSSGIEMGRNGIGIDRLWEPWDMISRAYHQTLCGFGRVMESYAPPSLACQI

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=96, Percent_Identity=35.4166666666667, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 26269; Mature: 26269

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSPSPSGEYFCLQTLDLYDDAECQSLGTQAAAGRRVQMLNKETDQAVRVMTVEDGYCT
CCCCCCCCCCEEEEEEECCCCCCHHHHHCCHHHCCCHHHHHCCCCCCEEEEEEECCCCEE
WLKKADLRHLEVAEEPYEFVPVDRPEIEARMENILIFAHAAKRVSNTYLWGGTTAPNYDC
HHHHCCCHHHHHCCCCCEECCCCCHHHHHHHHHEEEEEEHHHHHCCEEEECCCCCCCCCC
SGFIQAAYASQGIWLPRNSYQQGDFVEPVSQEELELGDLIFFAKEQRIDHVALYLGEGYY
HHHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHEEEEEHHCCCCEEEEEECCCEE
IHSSGIEMGRNGIGIDRLWEPWDMISRAYHQTLCGFGRVMESYAPPSLACQI
EECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MQLSPSPSGEYFCLQTLDLYDDAECQSLGTQAAAGRRVQMLNKETDQAVRVMTVEDGYCT
CCCCCCCCCCEEEEEEECCCCCCHHHHHCCHHHCCCHHHHHCCCCCCEEEEEEECCCCEE
WLKKADLRHLEVAEEPYEFVPVDRPEIEARMENILIFAHAAKRVSNTYLWGGTTAPNYDC
HHHHCCCHHHHHCCCCCEECCCCCHHHHHHHHHEEEEEEHHHHHCCEEEECCCCCCCCCC
SGFIQAAYASQGIWLPRNSYQQGDFVEPVSQEELELGDLIFFAKEQRIDHVALYLGEGYY
HHHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHEEEEEHHCCCCEEEEEECCCEE
IHSSGIEMGRNGIGIDRLWEPWDMISRAYHQTLCGFGRVMESYAPPSLACQI
EECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1514809; 1459966 [H]