| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078766
Identifier: 170078766
GI number: 170078766
Start: 2248889
End: 2249707
Strand: Direct
Name: 170078766
Synonym: SYNPCC7002_A2168
Alternate gene names: NA
Gene position: 2248889-2249707 (Clockwise)
Preceding gene: 170078765
Following gene: 170078767
Centisome position: 74.76
GC content: 53.72
Gene sequence:
>819_bases ATGTTTAAGCTTGGGACAATTAGCCAATTTTTTTCGCTGTTGTATTTGGGATTAATGCCTGGGGCGATCGCCGCGCCGCC GGATGCGAGTCAAATTGTCTCCCTCACGGGCGATCGCCTAATGATGCAGCAGGGTAGTCACCGTCAACAAGCAGCCCAGG TGGGCGATCGCCTCGAAAACCATAGCCAAAGCCTGATTGTGCCGGGTAATAACCACTCCTTTGCGCGTCTTGTCCTGGTG GGCGATCGCCAAACCTATGACGGACTGCTTTTACAAACTGGCCCCGCCCCCCAACAGACTCAATATCGGTTTCCCTGTGT GGTTGAAGGGGGCACCATCACCCTGAGTTGGCAAAAAGGTCAGCAACGGGGCTGTGCTGAAGGTCTCCGCATTCGCCCAA ACCCTGAGGGGCGATCGCCGACCCAACGCCTCAAAATCTTTGCCTATCAAATGGTGCTTTCGCCCGCCGCTGCCAGTGCT ATCCCCACCGATTCAGAACTCGTCATTCAGCCCAGTGGAGAGACACCGATCTGTGTTCGCGTCACAACCCAAGACAAGCG CCAAATCGTTGAAGTGTTGTGGGGCGAAATTATCCTCAGCAGCCCCAATCACCCCCAGGGTCTAAAAATCCGTAAGGGGA CGCAATACGACCAAGGCGAACTTCAGTTTTTTGATCCGGATATTCGTCTCGCAAGCTCCGCAATGCAAGCATTCTTTTCG GCTGCAGCTTGGTCAAATGCAGCAACTTCTACACCTTTGTCCGGCGAGATTCAAAATCACATTGACGTGATCCGCACGGC TTTTGCCACAGCACAGTAA
Upstream 100 bases:
>100_bases CACTATGATTTGATTAGGCTGAAATCGTGCTGGGCGATGATTTCATGCTTTTTCCCAGGAAGAGATCTACGTTGATGTCT AGGAGCGTCGGGAATAGGAA
Downstream 100 bases:
>100_bases AAGATTGCGATGCTGCCCTAATTGCTTTTTGACACCAAAAAAATACAAGAAATTCATCAAATCTTCTTTTTTTTGCTGAG TATGTTCAATTGACAAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MFKLGTISQFFSLLYLGLMPGAIAAPPDASQIVSLTGDRLMMQQGSHRQQAAQVGDRLENHSQSLIVPGNNHSFARLVLV GDRQTYDGLLLQTGPAPQQTQYRFPCVVEGGTITLSWQKGQQRGCAEGLRIRPNPEGRSPTQRLKIFAYQMVLSPAAASA IPTDSELVIQPSGETPICVRVTTQDKRQIVEVLWGEIILSSPNHPQGLKIRKGTQYDQGELQFFDPDIRLASSAMQAFFS AAAWSNAATSTPLSGEIQNHIDVIRTAFATAQ
Sequences:
>Translated_272_residues MFKLGTISQFFSLLYLGLMPGAIAAPPDASQIVSLTGDRLMMQQGSHRQQAAQVGDRLENHSQSLIVPGNNHSFARLVLV GDRQTYDGLLLQTGPAPQQTQYRFPCVVEGGTITLSWQKGQQRGCAEGLRIRPNPEGRSPTQRLKIFAYQMVLSPAAASA IPTDSELVIQPSGETPICVRVTTQDKRQIVEVLWGEIILSSPNHPQGLKIRKGTQYDQGELQFFDPDIRLASSAMQAFFS AAAWSNAATSTPLSGEIQNHIDVIRTAFATAQ >Mature_272_residues MFKLGTISQFFSLLYLGLMPGAIAAPPDASQIVSLTGDRLMMQQGSHRQQAAQVGDRLENHSQSLIVPGNNHSFARLVLV GDRQTYDGLLLQTGPAPQQTQYRFPCVVEGGTITLSWQKGQQRGCAEGLRIRPNPEGRSPTQRLKIFAYQMVLSPAAASA IPTDSELVIQPSGETPICVRVTTQDKRQIVEVLWGEIILSSPNHPQGLKIRKGTQYDQGELQFFDPDIRLASSAMQAFFS AAAWSNAATSTPLSGEIQNHIDVIRTAFATAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29674; Mature: 29674
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKLGTISQFFSLLYLGLMPGAIAAPPDASQIVSLTGDRLMMQQGSHRQQAAQVGDRLEN CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHC HSQSLIVPGNNHSFARLVLVGDRQTYDGLLLQTGPAPQQTQYRFPCVVEGGTITLSWQKG CCCEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCEECCEEEECCEEEEEECCC QQRGCAEGLRIRPNPEGRSPTQRLKIFAYQMVLSPAAASAIPTDSELVIQPSGETPICVR CCCHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEE VTTQDKRQIVEVLWGEIILSSPNHPQGLKIRKGTQYDQGELQFFDPDIRLASSAMQAFFS ECCHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHH AAAWSNAATSTPLSGEIQNHIDVIRTAFATAQ HHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFKLGTISQFFSLLYLGLMPGAIAAPPDASQIVSLTGDRLMMQQGSHRQQAAQVGDRLEN CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHC HSQSLIVPGNNHSFARLVLVGDRQTYDGLLLQTGPAPQQTQYRFPCVVEGGTITLSWQKG CCCEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCEECCEEEECCEEEEEECCC QQRGCAEGLRIRPNPEGRSPTQRLKIFAYQMVLSPAAASAIPTDSELVIQPSGETPICVR CCCHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEE VTTQDKRQIVEVLWGEIILSSPNHPQGLKIRKGTQYDQGELQFFDPDIRLASSAMQAFFS ECCHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHH AAAWSNAATSTPLSGEIQNHIDVIRTAFATAQ HHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA