| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is dnaJ [H]
Identifier: 170078759
GI number: 170078759
Start: 2242132
End: 2243079
Strand: Direct
Name: dnaJ [H]
Synonym: SYNPCC7002_A2161
Alternate gene names: 170078759
Gene position: 2242132-2243079 (Clockwise)
Preceding gene: 170078758
Following gene: 170078760
Centisome position: 74.54
GC content: 50.53
Gene sequence:
>948_bases ATGAACAATTTGCGTAACTATTATGAAATTTTAGGCGTTCCTCGTAATGCCTCTAGTGATGAGATTAAGCGCTCCTTTCG ACGGTTAGCGCGGCGCTATCATCCGGATGTCAACCCAGGGGATAAGGTAGCAGAAGAAAAGTTTAAGGATCTCAACGAGG CCTACGAAGTGCTGTCCGATGATGGGCGGCGATCGCAGTATGACCAGTTCACCCGGGCCATGGGGGGAAAATACAGTCGC CCTGGTTTTAATCGCACCAATCGACCCCAGCGCAACGATTTTAGTCAGTTCGCCAATATTGGCAGTGTCAATCCCTTTGG GCCGAAAGACCGACAGCAGACCACCGCCCGGGTTCGGAGCAATAGCTACGAAGATTTTCGCCCCGGCACCACAAAAACAA CCAAAGTGGCTACCCCAAAATCCCCTGCCAAACGGGATGTGGAAGCACGTCTCACCCTGCCCCTGGAAAAAGCCTATCGC GGTGGGCGAGAACGGATTCGTCTCGAAGATGGGCGATCGCTTGAAGTCGATATGCCGCCCCACATGGTCGATGGCCAGCG CATTCGGTTGCGCAATCAGGGTATCAATGGCGGTAACTTATATCTCAAAATTACTGTGGCTCCCCATCCTTTCTTTGAAG TGCAGGGTGCTGATATTTACTGCCAAGTGCCCCTCAGTCCTAGCGAAGCTATTTTGGGTGGTTCCATCGAAATTCCGACC ATTGACGGCCTAGTAAAAATGACTGTGCCCAAGGGGGTTAAACCAGGTCAGCGATTACGGTTGGCGAATAAAGGGTATCC CCGTAGCTCCGGCTCTCGTGGCGATCAACTGGTAGAAGTCCAGCTTGTTTTACCACCAGAAATTACCGAAGAAGAGCGGG CTTTGTACGAAAAATTACAGGAAGTCGAAAGTTTTAATCCCCGCAAAAATATTTATCAGTATTCGTAA
Upstream 100 bases:
>100_bases AGACAGTTGTTTTACTTCGTAATTCCGGCATAATAAACATCACATCTGGGAACAGTGCGCCATTATCTAAGGAGAGAATT CCTCACTCTGTCGCCTAAAT
Downstream 100 bases:
>100_bases ATTCGTAAAATGCTCAATCAAGGCTGGGTCTACCGGGATCGCGTGAAACCCTCCCAAGCGGGCCTAGCGGTCTTGGATTT TTATGCAGAATTTTATCGCC
Product: chaperone protein dnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MNNLRNYYEILGVPRNASSDEIKRSFRRLARRYHPDVNPGDKVAEEKFKDLNEAYEVLSDDGRRSQYDQFTRAMGGKYSR PGFNRTNRPQRNDFSQFANIGSVNPFGPKDRQQTTARVRSNSYEDFRPGTTKTTKVATPKSPAKRDVEARLTLPLEKAYR GGRERIRLEDGRSLEVDMPPHMVDGQRIRLRNQGINGGNLYLKITVAPHPFFEVQGADIYCQVPLSPSEAILGGSIEIPT IDGLVKMTVPKGVKPGQRLRLANKGYPRSSGSRGDQLVEVQLVLPPEITEEERALYEKLQEVESFNPRKNIYQYS
Sequences:
>Translated_315_residues MNNLRNYYEILGVPRNASSDEIKRSFRRLARRYHPDVNPGDKVAEEKFKDLNEAYEVLSDDGRRSQYDQFTRAMGGKYSR PGFNRTNRPQRNDFSQFANIGSVNPFGPKDRQQTTARVRSNSYEDFRPGTTKTTKVATPKSPAKRDVEARLTLPLEKAYR GGRERIRLEDGRSLEVDMPPHMVDGQRIRLRNQGINGGNLYLKITVAPHPFFEVQGADIYCQVPLSPSEAILGGSIEIPT IDGLVKMTVPKGVKPGQRLRLANKGYPRSSGSRGDQLVEVQLVLPPEITEEERALYEKLQEVESFNPRKNIYQYS >Mature_315_residues MNNLRNYYEILGVPRNASSDEIKRSFRRLARRYHPDVNPGDKVAEEKFKDLNEAYEVLSDDGRRSQYDQFTRAMGGKYSR PGFNRTNRPQRNDFSQFANIGSVNPFGPKDRQQTTARVRSNSYEDFRPGTTKTTKVATPKSPAKRDVEARLTLPLEKAYR GGRERIRLEDGRSLEVDMPPHMVDGQRIRLRNQGINGGNLYLKITVAPHPFFEVQGADIYCQVPLSPSEAILGGSIEIPT IDGLVKMTVPKGVKPGQRLRLANKGYPRSSGSRGDQLVEVQLVLPPEITEEERALYEKLQEVESFNPRKNIYQYS
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI205360840, Length=343, Percent_Identity=27.6967930029155, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI205360838, Length=343, Percent_Identity=27.6967930029155, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI7706495, Length=327, Percent_Identity=29.9694189602446, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI6631085, Length=332, Percent_Identity=30.7228915662651, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI5453690, Length=340, Percent_Identity=28.8235294117647, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI27151736, Length=115, Percent_Identity=46.0869565217391, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI88501736, Length=115, Percent_Identity=46.0869565217391, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI194328760, Length=357, Percent_Identity=24.9299719887955, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI194328758, Length=357, Percent_Identity=24.9299719887955, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI39204547, Length=323, Percent_Identity=24.4582043343653, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI23503241, Length=113, Percent_Identity=46.0176991150442, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI4504511, Length=358, Percent_Identity=25.9776536312849, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI56549115, Length=363, Percent_Identity=24.7933884297521, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI201862518, Length=66, Percent_Identity=53.030303030303, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI201862587, Length=66, Percent_Identity=53.030303030303, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI29126218, Length=63, Percent_Identity=50.7936507936508, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI9558755, Length=123, Percent_Identity=38.2113821138211, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI47777312, Length=71, Percent_Identity=52.112676056338, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI17388799, Length=68, Percent_Identity=52.9411764705882, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI4885495, Length=68, Percent_Identity=52.9411764705882, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI45504382, Length=63, Percent_Identity=47.6190476190476, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI194306642, Length=72, Percent_Identity=50, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI194306640, Length=72, Percent_Identity=50, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI21553335, Length=75, Percent_Identity=46.6666666666667, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI56687498, Length=68, Percent_Identity=48.5294117647059, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI22749377, Length=72, Percent_Identity=45.8333333333333, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI5031741, Length=63, Percent_Identity=50.7936507936508, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI24308127, Length=86, Percent_Identity=38.3720930232558, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI72534740, Length=70, Percent_Identity=44.2857142857143, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI157671935, Length=118, Percent_Identity=35.5932203389831, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1787235, Length=322, Percent_Identity=35.4037267080745, Blast_Score=164, Evalue=6e-42, Organism=Escherichia coli, GI1786197, Length=350, Percent_Identity=32.5714285714286, Blast_Score=164, Evalue=7e-42, Organism=Caenorhabditis elegans, GI17534355, Length=338, Percent_Identity=28.4023668639053, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI212645553, Length=64, Percent_Identity=53.125, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17554644, Length=63, Percent_Identity=52.3809523809524, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17553096, Length=125, Percent_Identity=27.2, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17553098, Length=63, Percent_Identity=49.2063492063492, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI115532378, Length=89, Percent_Identity=42.6966292134831, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17507263, Length=63, Percent_Identity=47.6190476190476, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324265, Length=352, Percent_Identity=27.8409090909091, Blast_Score=97, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6324321, Length=356, Percent_Identity=24.438202247191, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6322194, Length=66, Percent_Identity=48.4848484848485, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6323870, Length=66, Percent_Identity=45.4545454545455, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321094, Length=184, Percent_Identity=24.4565217391304, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320888, Length=64, Percent_Identity=53.125, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322388, Length=115, Percent_Identity=40, Blast_Score=70, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323119, Length=165, Percent_Identity=28.4848484848485, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323813, Length=66, Percent_Identity=50, Blast_Score=63, Evalue=7e-11, Organism=Drosophila melanogaster, GI85726398, Length=352, Percent_Identity=27.5568181818182, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24658562, Length=319, Percent_Identity=26.3322884012539, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24658555, Length=319, Percent_Identity=26.3322884012539, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI18858081, Length=343, Percent_Identity=26.2390670553936, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI17737735, Length=63, Percent_Identity=49.2063492063492, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574723, Length=63, Percent_Identity=49.2063492063492, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24668523, Length=63, Percent_Identity=49.2063492063492, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI45552813, Length=66, Percent_Identity=46.969696969697, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI45549272, Length=66, Percent_Identity=46.969696969697, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI45552811, Length=66, Percent_Identity=46.969696969697, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24646562, Length=67, Percent_Identity=52.2388059701493, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646560, Length=67, Percent_Identity=52.2388059701493, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646558, Length=67, Percent_Identity=52.2388059701493, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646556, Length=67, Percent_Identity=52.2388059701493, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI21357547, Length=67, Percent_Identity=52.2388059701493, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI19920464, Length=64, Percent_Identity=50, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24654066, Length=99, Percent_Identity=36.3636363636364, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24654070, Length=99, Percent_Identity=36.3636363636364, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24654068, Length=99, Percent_Identity=36.3636363636364, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24654072, Length=99, Percent_Identity=36.3636363636364, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24668492, Length=65, Percent_Identity=50.7692307692308, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI161077138, Length=66, Percent_Identity=46.969696969697, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24762799, Length=82, Percent_Identity=45.1219512195122, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI17648033, Length=69, Percent_Identity=46.3768115942029, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24584630, Length=69, Percent_Identity=46.3768115942029, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI20129487, Length=70, Percent_Identity=47.1428571428571, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24584014, Length=70, Percent_Identity=47.1428571428571, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]
EC number: NA
Molecular weight: Translated: 35833; Mature: 35833
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLRNYYEILGVPRNASSDEIKRSFRRLARRYHPDVNPGDKVAEEKFKDLNEAYEVLSD CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC DGRRSQYDQFTRAMGGKYSRPGFNRTNRPQRNDFSQFANIGSVNPFGPKDRQQTTARVRS CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHC NSYEDFRPGTTKTTKVATPKSPAKRDVEARLTLPLEKAYRGGRERIRLEDGRSLEVDMPP CCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCHHHHHCCCCCEEEECCCCEEEECCCC HMVDGQRIRLRNQGINGGNLYLKITVAPHPFFEVQGADIYCQVPLSPSEAILGGSIEIPT CCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEECCCCEEEECCCCCCCHHCCCCEECCC IDGLVKMTVPKGVKPGQRLRLANKGYPRSSGSRGDQLVEVQLVLPPEITEEERALYEKLQ CCCEEEEECCCCCCCCHHEEECCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH EVESFNPRKNIYQYS HHHCCCCCCCCCCCC >Mature Secondary Structure MNNLRNYYEILGVPRNASSDEIKRSFRRLARRYHPDVNPGDKVAEEKFKDLNEAYEVLSD CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC DGRRSQYDQFTRAMGGKYSRPGFNRTNRPQRNDFSQFANIGSVNPFGPKDRQQTTARVRS CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHC NSYEDFRPGTTKTTKVATPKSPAKRDVEARLTLPLEKAYRGGRERIRLEDGRSLEVDMPP CCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCHHHHHCCCCCEEEECCCCEEEECCCC HMVDGQRIRLRNQGINGGNLYLKITVAPHPFFEVQGADIYCQVPLSPSEAILGGSIEIPT CCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEECCCCEEEECCCCCCCHHCCCCEECCC IDGLVKMTVPKGVKPGQRLRLANKGYPRSSGSRGDQLVEVQLVLPPEITEEERALYEKLQ CCCEEEEECCCCCCCCHHEEECCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH EVESFNPRKNIYQYS HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]