| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is gph [C]
Identifier: 170078752
GI number: 170078752
Start: 2235952
End: 2236692
Strand: Direct
Name: gph [C]
Synonym: SYNPCC7002_A2154
Alternate gene names: 170078752
Gene position: 2235952-2236692 (Clockwise)
Preceding gene: 170078751
Following gene: 170078753
Centisome position: 74.33
GC content: 54.52
Gene sequence:
>741_bases ATGATTACAGTGCAAGTGGGCGATCGCCTTTTTGAAAACATTACGGGAATCATTTTTGATAAAGATGGCACCCTCGCCGA CTCCCAGAACTATCTGCGGGAACTGGCCCAAAAACGCGCCCGGTTGATCGATGCCCAAATTCCAGGAGTGGGGGAACCGC TGCTGATGGCCTTCGGGATGGTGGATGGGGTACTCGACCCAACGGGACTAATGGCGGTGGGCAGTCACCCAGAAAATGCG ATCGCCGCCGCCGCCTACATTGCCGAAACCGGGCGCAGTTGGTTTGAAGCCCTCGATATTGCCAAAAAAGCCTTTGCGGA AGCGGAACAGATGTTGGGTGATCGCAGTCATACATCACCATTGTTTGCCGGGAGCCTAGAGGTGCTGAAATTTTGCCACG ATGCAGGTTTGAAACTGGGGATTCTCTCCATGGACAGCACCGCCAACGTGGAAATTTTCGTCAAAACTTACCAGTTGCAA GATTACATCCAACTGGAAATGGGGGCAGAATTTGGCCTCAAACCCGACCCCGCGTTATTCCTCAAAGCCTGTGCAACCCT GGGAACTGAGCCGAGTCGAACCCTGATGGTGGGCGATGCCCCAGGGGATATTCAAATGGCCAAGGCGGCAGGGGCCGCGG GCACCGTGGGAATTTGTTGGGGAGATGCTACCCAAGCGCACCTAGAAACAGCGGATGTGGCGATCGCCAACCTCGATGAA GTGAAAATTTTGCGGGGCTAA
Upstream 100 bases:
>100_bases ATACCCTTCCCTCTGGCTGAGTCTGCTCAGTTTAAAATATCGGCTCACCGTCGGCACCTAAAATGTTATTGACCTTGGCA ACGGATTAGTGGCATTTACG
Downstream 100 bases:
>100_bases AACCAATGCACGGGAATCGACGACAGTTTTTAACCTATGGGGGCTTGGCCCTAGGGAGTGTACTTATTTCGCGTGGGATT ATTGCAAAATCTCAGGCGAT
Product: putative haloacid dehalogenase-like hydrolase
Products: Glycolate; Phosphate [C]
Alternate protein names: Haloacid Dehalogenase/Epoxide Hydrolase Family Protein; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; HAD Superfamily Phosphatase; Phosphatase; HAD Superfamily Hydrolase; Phosphoglycolate Phosphatase; Phosphoglycolate Phosphatase Protein; Haloacid Dehalogenase/Epoxide Hydrolase Family
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MITVQVGDRLFENITGIIFDKDGTLADSQNYLRELAQKRARLIDAQIPGVGEPLLMAFGMVDGVLDPTGLMAVGSHPENA IAAAAYIAETGRSWFEALDIAKKAFAEAEQMLGDRSHTSPLFAGSLEVLKFCHDAGLKLGILSMDSTANVEIFVKTYQLQ DYIQLEMGAEFGLKPDPALFLKACATLGTEPSRTLMVGDAPGDIQMAKAAGAAGTVGICWGDATQAHLETADVAIANLDE VKILRG
Sequences:
>Translated_246_residues MITVQVGDRLFENITGIIFDKDGTLADSQNYLRELAQKRARLIDAQIPGVGEPLLMAFGMVDGVLDPTGLMAVGSHPENA IAAAAYIAETGRSWFEALDIAKKAFAEAEQMLGDRSHTSPLFAGSLEVLKFCHDAGLKLGILSMDSTANVEIFVKTYQLQ DYIQLEMGAEFGLKPDPALFLKACATLGTEPSRTLMVGDAPGDIQMAKAAGAAGTVGICWGDATQAHLETADVAIANLDE VKILRG >Mature_246_residues MITVQVGDRLFENITGIIFDKDGTLADSQNYLRELAQKRARLIDAQIPGVGEPLLMAFGMVDGVLDPTGLMAVGSHPENA IAAAAYIAETGRSWFEALDIAKKAFAEAEQMLGDRSHTSPLFAGSLEVLKFCHDAGLKLGILSMDSTANVEIFVKTYQLQ DYIQLEMGAEFGLKPDPALFLKACATLGTEPSRTLMVGDAPGDIQMAKAAGAAGTVGICWGDATQAHLETADVAIANLDE VKILRG
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.18 [C]
Molecular weight: Translated: 26158; Mature: 26158
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITVQVGDRLFENITGIIFDKDGTLADSQNYLRELAQKRARLIDAQIPGVGEPLLMAFGM CEEEEEHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VDGVLDPTGLMAVGSHPENAIAAAAYIAETGRSWFEALDIAKKAFAEAEQMLGDRSHTSP HHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LFAGSLEVLKFCHDAGLKLGILSMDSTANVEIFVKTYQLQDYIQLEMGAEFGLKPDPALF CHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEHHHHHEEEECCCCCCCCCHHHH LKACATLGTEPSRTLMVGDAPGDIQMAKAAGAAGTVGICWGDATQAHLETADVAIANLDE HHHHHHCCCCCCCEEEEECCCCCEEEHHHCCCCCEEEEEECCCCHHHHHHHHEEEECCCC VKILRG EEEECC >Mature Secondary Structure MITVQVGDRLFENITGIIFDKDGTLADSQNYLRELAQKRARLIDAQIPGVGEPLLMAFGM CEEEEEHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VDGVLDPTGLMAVGSHPENAIAAAAYIAETGRSWFEALDIAKKAFAEAEQMLGDRSHTSP HHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LFAGSLEVLKFCHDAGLKLGILSMDSTANVEIFVKTYQLQDYIQLEMGAEFGLKPDPALF CHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEHHHHHEEEECCCCCCCCCHHHH LKACATLGTEPSRTLMVGDAPGDIQMAKAAGAAGTVGICWGDATQAHLETADVAIANLDE HHHHHHCCCCCCCEEEEECCCCCEEEHHHCCCCCEEEEEECCCCHHHHHHHHEEEECCCC VKILRG EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.57 {phosphoglycolate}} [C]
Substrates: D-Glycerate 2-phosphatelyc; H2O [C]
Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]
General reaction: Additional information:
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA