Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is gph [C]

Identifier: 170078752

GI number: 170078752

Start: 2235952

End: 2236692

Strand: Direct

Name: gph [C]

Synonym: SYNPCC7002_A2154

Alternate gene names: 170078752

Gene position: 2235952-2236692 (Clockwise)

Preceding gene: 170078751

Following gene: 170078753

Centisome position: 74.33

GC content: 54.52

Gene sequence:

>741_bases
ATGATTACAGTGCAAGTGGGCGATCGCCTTTTTGAAAACATTACGGGAATCATTTTTGATAAAGATGGCACCCTCGCCGA
CTCCCAGAACTATCTGCGGGAACTGGCCCAAAAACGCGCCCGGTTGATCGATGCCCAAATTCCAGGAGTGGGGGAACCGC
TGCTGATGGCCTTCGGGATGGTGGATGGGGTACTCGACCCAACGGGACTAATGGCGGTGGGCAGTCACCCAGAAAATGCG
ATCGCCGCCGCCGCCTACATTGCCGAAACCGGGCGCAGTTGGTTTGAAGCCCTCGATATTGCCAAAAAAGCCTTTGCGGA
AGCGGAACAGATGTTGGGTGATCGCAGTCATACATCACCATTGTTTGCCGGGAGCCTAGAGGTGCTGAAATTTTGCCACG
ATGCAGGTTTGAAACTGGGGATTCTCTCCATGGACAGCACCGCCAACGTGGAAATTTTCGTCAAAACTTACCAGTTGCAA
GATTACATCCAACTGGAAATGGGGGCAGAATTTGGCCTCAAACCCGACCCCGCGTTATTCCTCAAAGCCTGTGCAACCCT
GGGAACTGAGCCGAGTCGAACCCTGATGGTGGGCGATGCCCCAGGGGATATTCAAATGGCCAAGGCGGCAGGGGCCGCGG
GCACCGTGGGAATTTGTTGGGGAGATGCTACCCAAGCGCACCTAGAAACAGCGGATGTGGCGATCGCCAACCTCGATGAA
GTGAAAATTTTGCGGGGCTAA

Upstream 100 bases:

>100_bases
ATACCCTTCCCTCTGGCTGAGTCTGCTCAGTTTAAAATATCGGCTCACCGTCGGCACCTAAAATGTTATTGACCTTGGCA
ACGGATTAGTGGCATTTACG

Downstream 100 bases:

>100_bases
AACCAATGCACGGGAATCGACGACAGTTTTTAACCTATGGGGGCTTGGCCCTAGGGAGTGTACTTATTTCGCGTGGGATT
ATTGCAAAATCTCAGGCGAT

Product: putative haloacid dehalogenase-like hydrolase

Products: Glycolate; Phosphate [C]

Alternate protein names: Haloacid Dehalogenase/Epoxide Hydrolase Family Protein; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; HAD Superfamily Phosphatase; Phosphatase; HAD Superfamily Hydrolase; Phosphoglycolate Phosphatase; Phosphoglycolate Phosphatase Protein; Haloacid Dehalogenase/Epoxide Hydrolase Family

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MITVQVGDRLFENITGIIFDKDGTLADSQNYLRELAQKRARLIDAQIPGVGEPLLMAFGMVDGVLDPTGLMAVGSHPENA
IAAAAYIAETGRSWFEALDIAKKAFAEAEQMLGDRSHTSPLFAGSLEVLKFCHDAGLKLGILSMDSTANVEIFVKTYQLQ
DYIQLEMGAEFGLKPDPALFLKACATLGTEPSRTLMVGDAPGDIQMAKAAGAAGTVGICWGDATQAHLETADVAIANLDE
VKILRG

Sequences:

>Translated_246_residues
MITVQVGDRLFENITGIIFDKDGTLADSQNYLRELAQKRARLIDAQIPGVGEPLLMAFGMVDGVLDPTGLMAVGSHPENA
IAAAAYIAETGRSWFEALDIAKKAFAEAEQMLGDRSHTSPLFAGSLEVLKFCHDAGLKLGILSMDSTANVEIFVKTYQLQ
DYIQLEMGAEFGLKPDPALFLKACATLGTEPSRTLMVGDAPGDIQMAKAAGAAGTVGICWGDATQAHLETADVAIANLDE
VKILRG
>Mature_246_residues
MITVQVGDRLFENITGIIFDKDGTLADSQNYLRELAQKRARLIDAQIPGVGEPLLMAFGMVDGVLDPTGLMAVGSHPENA
IAAAAYIAETGRSWFEALDIAKKAFAEAEQMLGDRSHTSPLFAGSLEVLKFCHDAGLKLGILSMDSTANVEIFVKTYQLQ
DYIQLEMGAEFGLKPDPALFLKACATLGTEPSRTLMVGDAPGDIQMAKAAGAAGTVGICWGDATQAHLETADVAIANLDE
VKILRG

Specific function: Unknown

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.18 [C]

Molecular weight: Translated: 26158; Mature: 26158

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVQVGDRLFENITGIIFDKDGTLADSQNYLRELAQKRARLIDAQIPGVGEPLLMAFGM
CEEEEEHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
VDGVLDPTGLMAVGSHPENAIAAAAYIAETGRSWFEALDIAKKAFAEAEQMLGDRSHTSP
HHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LFAGSLEVLKFCHDAGLKLGILSMDSTANVEIFVKTYQLQDYIQLEMGAEFGLKPDPALF
CHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEHHHHHEEEECCCCCCCCCHHHH
LKACATLGTEPSRTLMVGDAPGDIQMAKAAGAAGTVGICWGDATQAHLETADVAIANLDE
HHHHHHCCCCCCCEEEEECCCCCEEEHHHCCCCCEEEEEECCCCHHHHHHHHEEEECCCC
VKILRG
EEEECC
>Mature Secondary Structure
MITVQVGDRLFENITGIIFDKDGTLADSQNYLRELAQKRARLIDAQIPGVGEPLLMAFGM
CEEEEEHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
VDGVLDPTGLMAVGSHPENAIAAAAYIAETGRSWFEALDIAKKAFAEAEQMLGDRSHTSP
HHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LFAGSLEVLKFCHDAGLKLGILSMDSTANVEIFVKTYQLQDYIQLEMGAEFGLKPDPALF
CHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEHHHHHEEEECCCCCCCCCHHHH
LKACATLGTEPSRTLMVGDAPGDIQMAKAAGAAGTVGICWGDATQAHLETADVAIANLDE
HHHHHHCCCCCCCEEEEECCCCCEEEHHHCCCCCEEEEEECCCCHHHHHHHHEEEECCCC
VKILRG
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mg2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.57 {phosphoglycolate}} [C]

Substrates: D-Glycerate 2-phosphatelyc; H2O [C]

Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]

General reaction: Additional information:

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA