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The map label for this gene is yodJ [H]

Identifier: 170078743

GI number: 170078743

Start: 2227122

End: 2227907

Strand: Reverse

Name: yodJ [H]

Synonym: SYNPCC7002_A2145

Alternate gene names: 170078743

Gene position: 2227907-2227122 (Counterclockwise)

Preceding gene: 170078745

Following gene: 170078742

Centisome position: 74.06

GC content: 52.04

Gene sequence:

>786_bases
GTGTCCGAAGAATTTGATGACCTCTCTGTCCTGGATGACATTGATATTCCTGAGGTCGTGCGGGATGAAGATCCAGAACA
AAGCGAAAAAACCACAGGATCTAACCCCAAGCAACGCCTCTTGTTGGGGTTGGGGGGAATCCTCATTGTCGGGTTCGGGG
CGATCGCCTCGCGCCAGTTTTTCCAGGCCACCCCAGATCCCGTTGTGCCAGAGGATCTTGCCAGCGATGTTTCTCCGTCC
GAATCAGGCAGCAATGATACCGAAACCAGCGAACAAATTCTCGGTCATTTTCCCTACCCCGAAGCCGAGGTCAGTGAACT
GGTCGCCGTCAGTGCCAATGGTCGCTTGAAATTACGCCCCGCCGCTGCTGAAAAATTTCTTCAAATGCAGGCTGATGCCA
GACAAGCCGGGATCAACTTAGCCTTACTTTCTGCCTTTCGCACCATCGAAGAGCAACAATATTTATTTTTTGACATTAAA
GAGCAGCGCGCCCAGGACACCACCAAACGGGCCGAGGTGAGTGCCCCCCCCCGCTACAGTGAACACCATACAGGCTACGC
TATCGATCTAGGGGATGGAAATTTGCCAGCGACCCACCTCCAGGAAAACTTTGAAAATACAGCGGCGTTTCAGTGGCTCC
AAAATAATGCCGCCCGTTATAGTTTTGAGTTGTCTTTCCCGCGAGATAATCCCCAGGGCATCGCCTACGAGCCTTGGCAT
TGGCGCTTTGTGGGGGATCAAGATAGTCTGGAAACGTTTTACAAATCCCGCAATTTGAATCCGTAG

Upstream 100 bases:

>100_bases
CACCAGATGATGATTTTGCCGGAGAACTTCCCCATTGCGAAGAAAGCAACATAAGATAGAACCACAAAATATTTAGGGAG
TGCAGCGGTAGGAATTGAGC

Downstream 100 bases:

>100_bases
CCCTTTTCTTGGGAAACGATTGGGAGAGAAAAAGGTGATGGGCGTACATTTTCAGAGGAACATTAGATCATGGTAGAAAC
CCTCGATCAACAGCGTTGGT

Product: putative D-alanyl-D-alanine carboxypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSEEFDDLSVLDDIDIPEVVRDEDPEQSEKTTGSNPKQRLLLGLGGILIVGFGAIASRQFFQATPDPVVPEDLASDVSPS
ESGSNDTETSEQILGHFPYPEAEVSELVAVSANGRLKLRPAAAEKFLQMQADARQAGINLALLSAFRTIEEQQYLFFDIK
EQRAQDTTKRAEVSAPPRYSEHHTGYAIDLGDGNLPATHLQENFENTAAFQWLQNNAARYSFELSFPRDNPQGIAYEPWH
WRFVGDQDSLETFYKSRNLNP

Sequences:

>Translated_261_residues
MSEEFDDLSVLDDIDIPEVVRDEDPEQSEKTTGSNPKQRLLLGLGGILIVGFGAIASRQFFQATPDPVVPEDLASDVSPS
ESGSNDTETSEQILGHFPYPEAEVSELVAVSANGRLKLRPAAAEKFLQMQADARQAGINLALLSAFRTIEEQQYLFFDIK
EQRAQDTTKRAEVSAPPRYSEHHTGYAIDLGDGNLPATHLQENFENTAAFQWLQNNAARYSFELSFPRDNPQGIAYEPWH
WRFVGDQDSLETFYKSRNLNP
>Mature_260_residues
SEEFDDLSVLDDIDIPEVVRDEDPEQSEKTTGSNPKQRLLLGLGGILIVGFGAIASRQFFQATPDPVVPEDLASDVSPSE
SGSNDTETSEQILGHFPYPEAEVSELVAVSANGRLKLRPAAAEKFLQMQADARQAGINLALLSAFRTIEEQQYLFFDIKE
QRAQDTTKRAEVSAPPRYSEHHTGYAIDLGDGNLPATHLQENFENTAAFQWLQNNAARYSFELSFPRDNPQGIAYEPWHW
RFVGDQDSLETFYKSRNLNP

Specific function: Unknown

COG id: COG1876

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR003709 [H]

Pfam domain/function: PF02557 VanY [H]

EC number: NA

Molecular weight: Translated: 29180; Mature: 29049

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEFDDLSVLDDIDIPEVVRDEDPEQSEKTTGSNPKQRLLLGLGGILIVGFGAIASRQF
CCCCCCCCHHHCCCCCCHHHCCCCCCHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHH
FQATPDPVVPEDLASDVSPSESGSNDTETSEQILGHFPYPEAEVSELVAVSANGRLKLRP
HCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHEEEECCCCEEEECH
AAAEKFLQMQADARQAGINLALLSAFRTIEEQQYLFFDIKEQRAQDTTKRAEVSAPPRYS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHCCCCCCCCCC
EHHTGYAIDLGDGNLPATHLQENFENTAAFQWLQNNAARYSFELSFPRDNPQGIAYEPWH
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEECCEE
WRFVGDQDSLETFYKSRNLNP
EEEECCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SEEFDDLSVLDDIDIPEVVRDEDPEQSEKTTGSNPKQRLLLGLGGILIVGFGAIASRQF
CCCCCCCHHHCCCCCCHHHCCCCCCHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHH
FQATPDPVVPEDLASDVSPSESGSNDTETSEQILGHFPYPEAEVSELVAVSANGRLKLRP
HCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHEEEECCCCEEEECH
AAAEKFLQMQADARQAGINLALLSAFRTIEEQQYLFFDIKEQRAQDTTKRAEVSAPPRYS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHCCCCCCCCCC
EHHTGYAIDLGDGNLPATHLQENFENTAAFQWLQNNAARYSFELSFPRDNPQGIAYEPWH
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEECCEE
WRFVGDQDSLETFYKSRNLNP
EEEECCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]