| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078741
Identifier: 170078741
GI number: 170078741
Start: 2225552
End: 2226103
Strand: Reverse
Name: 170078741
Synonym: SYNPCC7002_A2143
Alternate gene names: NA
Gene position: 2226103-2225552 (Counterclockwise)
Preceding gene: 170078742
Following gene: 170078739
Centisome position: 74.0
GC content: 55.98
Gene sequence:
>552_bases ATGTGGATTATTTCCTTTGTGATTGGTTGTGGTGTTGGTGCGGGGGCGTTTTACCTCGTCAAAAAAGATGACCTGAATCG GCTGGGCACTTTAGAAACGGAACTGAGTCAACTACGACGGGATCTACAAACCAGCGAAACCAACCACGAGCAACGGTTGC GGGAGGCGATCGCCACCTTACAGCAAGAGTATCAAGGCAAAATTGCCACCCTGGAAACGCAACTTGCCGCCGCAAAAAAT CCGGCCCCGGCAGAAACAGCAAGCTTGAAGGATCACACCGTCCCGGATACCCTAGAACCGCCGATCCTGGCCGCCACCAT CCAACCCCGCACCGACTCTACCCCCGTCTTGGTAAGTAGCCCCAGTGGTAAACCCTGCATTCCGCCAATTCTCGCCCAAG GGGTGACGTTTCAAACTGTCGCAGCGGCGATCGCCTCCTTTGAACCCCCAATTCTCGCTGCCGAAATTCACTGTCGCACC GAAACCTCAAGCCCCAGCCTCACCACCCCCAGCGGCAAACCCTGCATTCCGCCGATTCTTGCCCAAGCCTAA
Upstream 100 bases:
>100_bases AAAAATTCGCTAAAATCAAAAGCCGATTGCCTTGAAATACAGCAAAAAGGTCACAATCGATCTGTTTTTTTAGTGGTTTT GCCTGGAGTGTATTGAAATT
Downstream 100 bases:
>100_bases ACCAATTTCCCCTTGGGGAGATGCCATAGGATAGAGAGAGCTCTTCCCTGGAGAAAGGTCGCAAATACAAAACTGACTTC CCAGGGAAAATATCTAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MWIISFVIGCGVGAGAFYLVKKDDLNRLGTLETELSQLRRDLQTSETNHEQRLREAIATLQQEYQGKIATLETQLAAAKN PAPAETASLKDHTVPDTLEPPILAATIQPRTDSTPVLVSSPSGKPCIPPILAQGVTFQTVAAAIASFEPPILAAEIHCRT ETSSPSLTTPSGKPCIPPILAQA
Sequences:
>Translated_183_residues MWIISFVIGCGVGAGAFYLVKKDDLNRLGTLETELSQLRRDLQTSETNHEQRLREAIATLQQEYQGKIATLETQLAAAKN PAPAETASLKDHTVPDTLEPPILAATIQPRTDSTPVLVSSPSGKPCIPPILAQGVTFQTVAAAIASFEPPILAAEIHCRT ETSSPSLTTPSGKPCIPPILAQA >Mature_183_residues MWIISFVIGCGVGAGAFYLVKKDDLNRLGTLETELSQLRRDLQTSETNHEQRLREAIATLQQEYQGKIATLETQLAAAKN PAPAETASLKDHTVPDTLEPPILAATIQPRTDSTPVLVSSPSGKPCIPPILAQGVTFQTVAAAIASFEPPILAAEIHCRT ETSSPSLTTPSGKPCIPPILAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19462; Mature: 19462
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWIISFVIGCGVGAGAFYLVKKDDLNRLGTLETELSQLRRDLQTSETNHEQRLREAIATL CHHHHHHHHCCCCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH QQEYQGKIATLETQLAAAKNPAPAETASLKDHTVPDTLEPPILAATIQPRTDSTPVLVSS HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEC PSGKPCIPPILAQGVTFQTVAAAIASFEPPILAAEIHCRTETSSPSLTTPSGKPCIPPIL CCCCCCCCHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHH AQA CCC >Mature Secondary Structure MWIISFVIGCGVGAGAFYLVKKDDLNRLGTLETELSQLRRDLQTSETNHEQRLREAIATL CHHHHHHHHCCCCCCEEEEEECCCCCHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH QQEYQGKIATLETQLAAAKNPAPAETASLKDHTVPDTLEPPILAATIQPRTDSTPVLVSS HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEC PSGKPCIPPILAQGVTFQTVAAAIASFEPPILAAEIHCRTETSSPSLTTPSGKPCIPPIL CCCCCCCCHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHH AQA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA