Click here to switch to the map view.

The map label for this gene is glgA [H]

Identifier: 170078724

GI number: 170078724

Start: 2208456

End: 2209928

Strand: Direct

Name: glgA [H]

Synonym: SYNPCC7002_A2125

Alternate gene names: 170078724

Gene position: 2208456-2209928 (Clockwise)

Preceding gene: 170078723

Following gene: 170078725

Centisome position: 73.42

GC content: 50.98

Gene sequence:

>1473_bases
ATGTACATCGTCCAGATTGCTTCGGAATGCGCCCCCGTCGCGAAGGTAGGTGGACTTGGAGATGTGGTTTACGGACTCAG
TCGCGAGCTTAGTCTGCGCGGTCATTGTGTCGAAATCATTTTGCCCAAATATGATTGTCTCCGTTATGACCACATTTGGG
GGATGCACGAAGCCTATCGGGATCTTTGGGTACCCTGGTTTGGCGGTGCGATCCACTGCACCGTTTTCTATGGCTGGGTC
CATGGCCAACAATGTTTCTTTATCGAACCCCACTCCGGTGATAACTTTTTCAGTCGGGGCTTTTTTTATGGAGCCTTAGA
CGACCACATGCGCTTTGCCTTCTTTAGCAAGGCGGCCCTCGAATTTTTACAAAAATCCAACAAACGCCCCGATATTATCC
ACTGCCATGACTGGCAAACCGGTCTCGTTCCGGTGATGCTCTTTGAAATGTACAAGTGGCATGGCCTGTGGAATCAGCGG
GTGTGCTACACCATCCACAACTTTAAACATCAGGGTATCGCGGGCGCTGACGTACTGTGGGCGACGGGTCTCAATAACGA
GGGCTACTATTTCCACTACGATCGCCTCCGGGATAACTTTAATCCCTTTGCCTTAAATTGCATGAAAGGGGGCATTGTCT
ATGCCAATGCGGTGACGACCGTTTCTCCCCACCACGCCTGGGAAGCCCACTACACCGATATTGGTTGTGGCCTAAGCCAT
ACCCTCCATCTCCACCAAGACAAGTTCAAGGGAATTCTCAACGGCATCGACTACAGCACTTGGAACCCAGAAGTAGACCA
CAATATCGAGCTGCAATACAGTTGGGATAGCCTCGAAAATAAGGCGAAAAACAAAAAAGCCCTACGCGATCGCCTATTAC
TTGAAGACAATGACCGACCGATCATCGCCTACATTGGCCGTCTCGATGACCAAAAAGGCGTTCATCTCGTTCACCATGCC
ATGTACTACGCCTTGAATCGGGGAGCCCAATTTGTCCTCCTTGGTTCCGCCACCGAAGGCTCGATCAACTCTTGGTTCTG
GCATGAAAAATTCCACCTCAACGACAACCCCAACTGTCACATCGAGCTGGGCTTCAACGCCGAACTGTCCCACATGATCT
ATGCCGGGGCTGATATGCTTGTCGTCCCCAGTAACTACGAACCCTGCGGCCTGACCCAACTCATCGCCCTGAAGTATGGT
GTGGTGCCCATTGTCCGTGGTGTCGGTGGCCTCGTGAGTACCGTGTTTGACCGGGATCATGATGATAAACATCCCCCCGA
AGAACGAAATGGTTATGTCTTTTACCAAACGGATAACCACGCCCTCGAATCCGCCATGGAACGGGCCATTGGTTTATACA
CCGTGTACCCAGAGGAGTTCCGGAAGCTGCAAATCCAGGGGATGAAATATGACTACTCTTGGCATAACCCCGGCAATGAA
TATATTGATCTCTATGAGTTTATCCGCGCCTAA

Upstream 100 bases:

>100_bases
CACACTTCCGCCCCCGTATAGTTGCCGCTCACAGACAGATGCTTTATCTTTGAAAAAATTTTACGAATTTCCCATTCTTT
CAGAAACATAAGGAGTCCCT

Downstream 100 bases:

>100_bases
TGGGTTCTTATCCAACACACTTTGAGTACATTTTGAGATCAAACAGCTCAGTCATCCCTGGGAAATATGTGCCCAAAGCC
TGAACCAAGGCCCCAACAAT

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase 1 [H]

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MYIVQIASECAPVAKVGGLGDVVYGLSRELSLRGHCVEIILPKYDCLRYDHIWGMHEAYRDLWVPWFGGAIHCTVFYGWV
HGQQCFFIEPHSGDNFFSRGFFYGALDDHMRFAFFSKAALEFLQKSNKRPDIIHCHDWQTGLVPVMLFEMYKWHGLWNQR
VCYTIHNFKHQGIAGADVLWATGLNNEGYYFHYDRLRDNFNPFALNCMKGGIVYANAVTTVSPHHAWEAHYTDIGCGLSH
TLHLHQDKFKGILNGIDYSTWNPEVDHNIELQYSWDSLENKAKNKKALRDRLLLEDNDRPIIAYIGRLDDQKGVHLVHHA
MYYALNRGAQFVLLGSATEGSINSWFWHEKFHLNDNPNCHIELGFNAELSHMIYAGADMLVVPSNYEPCGLTQLIALKYG
VVPIVRGVGGLVSTVFDRDHDDKHPPEERNGYVFYQTDNHALESAMERAIGLYTVYPEEFRKLQIQGMKYDYSWHNPGNE
YIDLYEFIRA

Sequences:

>Translated_490_residues
MYIVQIASECAPVAKVGGLGDVVYGLSRELSLRGHCVEIILPKYDCLRYDHIWGMHEAYRDLWVPWFGGAIHCTVFYGWV
HGQQCFFIEPHSGDNFFSRGFFYGALDDHMRFAFFSKAALEFLQKSNKRPDIIHCHDWQTGLVPVMLFEMYKWHGLWNQR
VCYTIHNFKHQGIAGADVLWATGLNNEGYYFHYDRLRDNFNPFALNCMKGGIVYANAVTTVSPHHAWEAHYTDIGCGLSH
TLHLHQDKFKGILNGIDYSTWNPEVDHNIELQYSWDSLENKAKNKKALRDRLLLEDNDRPIIAYIGRLDDQKGVHLVHHA
MYYALNRGAQFVLLGSATEGSINSWFWHEKFHLNDNPNCHIELGFNAELSHMIYAGADMLVVPSNYEPCGLTQLIALKYG
VVPIVRGVGGLVSTVFDRDHDDKHPPEERNGYVFYQTDNHALESAMERAIGLYTVYPEEFRKLQIQGMKYDYSWHNPGNE
YIDLYEFIRA
>Mature_490_residues
MYIVQIASECAPVAKVGGLGDVVYGLSRELSLRGHCVEIILPKYDCLRYDHIWGMHEAYRDLWVPWFGGAIHCTVFYGWV
HGQQCFFIEPHSGDNFFSRGFFYGALDDHMRFAFFSKAALEFLQKSNKRPDIIHCHDWQTGLVPVMLFEMYKWHGLWNQR
VCYTIHNFKHQGIAGADVLWATGLNNEGYYFHYDRLRDNFNPFALNCMKGGIVYANAVTTVSPHHAWEAHYTDIGCGLSH
TLHLHQDKFKGILNGIDYSTWNPEVDHNIELQYSWDSLENKAKNKKALRDRLLLEDNDRPIIAYIGRLDDQKGVHLVHHA
MYYALNRGAQFVLLGSATEGSINSWFWHEKFHLNDNPNCHIELGFNAELSHMIYAGADMLVVPSNYEPCGLTQLIALKYG
VVPIVRGVGGLVSTVFDRDHDDKHPPEERNGYVFYQTDNHALESAMERAIGLYTVYPEEFRKLQIQGMKYDYSWHNPGNE
YIDLYEFIRA

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789836, Length=498, Percent_Identity=30.7228915662651, Blast_Score=219, Evalue=4e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.21 [H]

Molecular weight: Translated: 56588; Mature: 56588

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIVQIASECAPVAKVGGLGDVVYGLSRELSLRGHCVEIILPKYDCLRYDHIWGMHEAYR
CEEEEEHHHCCCHHHCCCCHHHHHHCCCCCCCCCCEEEEEECCHHHEEHHHHCCHHHHHH
DLWVPWFGGAIHCTVFYGWVHGQQCFFIEPHSGDNFFSRGFFYGALDDHMRFAFFSKAAL
HCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCHHHCCEEEEEHHHHHHHHHHHHHHH
EFLQKSNKRPDIIHCHDWQTGLVPVMLFEMYKWHGLWNQRVCYTIHNFKHQGIAGADVLW
HHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEE
ATGLNNEGYYFHYDRLRDNFNPFALNCMKGGIVYANAVTTVSPHHAWEAHYTDIGCGLSH
EECCCCCCEEEEEHHHCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCE
TLHLHQDKFKGILNGIDYSTWNPEVDHNIELQYSWDSLENKAKNKKALRDRLLLEDNDRP
EEEECHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHEEECCCCE
IIAYIGRLDDQKGVHLVHHAMYYALNRGAQFVLLGSATEGSINSWFWHEKFHLNDNPNCH
EEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEE
IELGFNAELSHMIYAGADMLVVPSNYEPCGLTQLIALKYGVVPIVRGVGGLVSTVFDRDH
EEECCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC
DDKHPPEERNGYVFYQTDNHALESAMERAIGLYTVYPEEFRKLQIQGMKYDYSWHNPGNE
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHEEEEECHHHHCEEEEEEEEEEECCCCCCCH
YIDLYEFIRA
HHHHHHHHCC
>Mature Secondary Structure
MYIVQIASECAPVAKVGGLGDVVYGLSRELSLRGHCVEIILPKYDCLRYDHIWGMHEAYR
CEEEEEHHHCCCHHHCCCCHHHHHHCCCCCCCCCCEEEEEECCHHHEEHHHHCCHHHHHH
DLWVPWFGGAIHCTVFYGWVHGQQCFFIEPHSGDNFFSRGFFYGALDDHMRFAFFSKAAL
HCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCHHHCCEEEEEHHHHHHHHHHHHHHH
EFLQKSNKRPDIIHCHDWQTGLVPVMLFEMYKWHGLWNQRVCYTIHNFKHQGIAGADVLW
HHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEE
ATGLNNEGYYFHYDRLRDNFNPFALNCMKGGIVYANAVTTVSPHHAWEAHYTDIGCGLSH
EECCCCCCEEEEEHHHCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCE
TLHLHQDKFKGILNGIDYSTWNPEVDHNIELQYSWDSLENKAKNKKALRDRLLLEDNDRP
EEEECHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHEEECCCCE
IIAYIGRLDDQKGVHLVHHAMYYALNRGAQFVLLGSATEGSINSWFWHEKFHLNDNPNCH
EEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEE
IELGFNAELSHMIYAGADMLVVPSNYEPCGLTQLIALKYGVVPIVRGVGGLVSTVFDRDH
EEECCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC
DDKHPPEERNGYVFYQTDNHALESAMERAIGLYTVYPEEFRKLQIQGMKYDYSWHNPGNE
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHEEEEECHHHHCEEEEEEEEEEECCCCCCCH
YIDLYEFIRA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA