| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078683
Identifier: 170078683
GI number: 170078683
Start: 2161563
End: 2161811
Strand: Direct
Name: 170078683
Synonym: SYNPCC7002_A2080
Alternate gene names: NA
Gene position: 2161563-2161811 (Clockwise)
Preceding gene: 170078682
Following gene: 170078684
Centisome position: 71.86
GC content: 52.21
Gene sequence:
>249_bases ATGTGCATTTGCGTGGACTGTGAATATGTTGACCGCTGCGAAACCTACCATGTCGTTGAAACCCAGCACCAACAGCCCCA TCTAACCGACCAGCCTGATTTTTCGCCCATCGAACCGATGATCAACGTCAATATCCGCTCTGAAGGGGAAATGATCGAAA TGGAATGGGATGTGGTGGGTTGCGCGAGTTTTTCCCAAGAAAAAGGAAAATGGGCGCGGCTCCGACCGGGGGAGGCGATT CCCACTTGA
Upstream 100 bases:
>100_bases CCCTGGTGTGTGCGGCATTGGGGATTCTTCTTTGAGGCGATCGCCTCTGGGGATCTCGCTATACTAAAACAAAGTTTCGT AACCCCTGGAGGTGCGCCCC
Downstream 100 bases:
>100_bases ATAATCGCTTAACCCTTGGCAAAAGTCCACGGGTTTTCTCCAGTAAAATATGGGCGTGAACATCGCTGTGAGGAAACATC CGATGAAGATAAAGGGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MCICVDCEYVDRCETYHVVETQHQQPHLTDQPDFSPIEPMINVNIRSEGEMIEMEWDVVGCASFSQEKGKWARLRPGEAI PT
Sequences:
>Translated_82_residues MCICVDCEYVDRCETYHVVETQHQQPHLTDQPDFSPIEPMINVNIRSEGEMIEMEWDVVGCASFSQEKGKWARLRPGEAI PT >Mature_82_residues MCICVDCEYVDRCETYHVVETQHQQPHLTDQPDFSPIEPMINVNIRSEGEMIEMEWDVVGCASFSQEKGKWARLRPGEAI PT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9456; Mature: 9456
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 11.0 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 11.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCICVDCEYVDRCETYHVVETQHQQPHLTDQPDFSPIEPMINVNIRSEGEMIEMEWDVVG CEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEEE CASFSQEKGKWARLRPGEAIPT CCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure MCICVDCEYVDRCETYHVVETQHQQPHLTDQPDFSPIEPMINVNIRSEGEMIEMEWDVVG CEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEEE CASFSQEKGKWARLRPGEAIPT CCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA