| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is yegS [C]
Identifier: 170078677
GI number: 170078677
Start: 2155466
End: 2156401
Strand: Reverse
Name: yegS [C]
Synonym: SYNPCC7002_A2073
Alternate gene names: 170078677
Gene position: 2156401-2155466 (Counterclockwise)
Preceding gene: 170078678
Following gene: 170078674
Centisome position: 71.69
GC content: 55.34
Gene sequence:
>936_bases ATGAAAAAAGTGCATCTCATTTTTAATCCGGTATCCGGTGCGGGCCATGCCCCCCAGGAACTGGAACAAATTCGAGCCAA GCTCCTCGATCAGGTTGAGCTTGAGATTCAATTTACCTCCCCCGAAGAAAGTGCGACGGCCTTGGCAGAAACGGCGATCG CCCAGGGAGCTGATCTCATCATTGCGTCTGGGGGCGACGGCACTGTTTCAGCGGTGGCGACAGTTTTGATGCACAGTAAT ATTCCCCTGGCCGTTATTCCCCGGGGGACGGCCAATGCCTTCGCGGCGGCCTTAGATATTCCCACAGCTATCGACCAAGC CTGTGATGTGATTTTGCAGGGACAGCCCCAACAGATCGACTGCGCCACCTGCAATGGTCAACCGATGATTCTTTTGGCTG GGATTGGCCTAGAGGCGGCGACCATTGGCGAAACTGACCGGGATAGTAAACAACGGTTTGGTTTCTTTGCCTATTTGTCC ACGGCAGTACAACAACTGCAAAAGCTGCAACCCTTCCAGGCGACCCTCGATTTTGGCGATCGCCAACAAACCTTTGATGA TGTGCTCGCGATCACCGTAGCGAACTTGGCCCCCAGCACTTCAATTTTGGCCCAGGGAACGGGCGGGGCCTCGGGTCAAG ATGCCCTACTCGATGTCACCGTTCTCACCATGGCTGACGAGGGAGAGCTTTTTGGTTTGCTCAGTGCATCCTACGAATTA TTCCAGGCGGCTCTCCAAGACAATCCCGCTGATCATCCCCACATCCAATCTTGGCGCACCGCCGAGTTAACAGTAACCAC CACGTCGCCCCAGGCTCTACTCTTAGACGGAGAATTGCTAGAGGAAATAACCATGGCCCAGTTCGCGGCGGTACCCCGGA GCCTCTGGGTGCAGCTTCCCCCTAAAGCGGCAACCCCCCCTGAAGAATCACCGTAA
Upstream 100 bases:
>100_bases TTATCATTACTGACCTCGCCCAGGAACAACTCCAAGCGGCGATCGCCACGGTACTCTAGGAAGTCTAGGGCGAACTTTTC ATATCCCCTCGTAGAACACG
Downstream 100 bases:
>100_bases TCCCTGCAATTAATAAACTCAAACCAATGAGTCCTAAGCTCCCCAAAATAATCACAATACGGGCGCGGGGTTGGTGGCTA ATCACCCAAGGGATGAGGAT
Product: putative lipid kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MKKVHLIFNPVSGAGHAPQELEQIRAKLLDQVELEIQFTSPEESATALAETAIAQGADLIIASGGDGTVSAVATVLMHSN IPLAVIPRGTANAFAAALDIPTAIDQACDVILQGQPQQIDCATCNGQPMILLAGIGLEAATIGETDRDSKQRFGFFAYLS TAVQQLQKLQPFQATLDFGDRQQTFDDVLAITVANLAPSTSILAQGTGGASGQDALLDVTVLTMADEGELFGLLSASYEL FQAALQDNPADHPHIQSWRTAELTVTTTSPQALLLDGELLEEITMAQFAAVPRSLWVQLPPKAATPPEESP
Sequences:
>Translated_311_residues MKKVHLIFNPVSGAGHAPQELEQIRAKLLDQVELEIQFTSPEESATALAETAIAQGADLIIASGGDGTVSAVATVLMHSN IPLAVIPRGTANAFAAALDIPTAIDQACDVILQGQPQQIDCATCNGQPMILLAGIGLEAATIGETDRDSKQRFGFFAYLS TAVQQLQKLQPFQATLDFGDRQQTFDDVLAITVANLAPSTSILAQGTGGASGQDALLDVTVLTMADEGELFGLLSASYEL FQAALQDNPADHPHIQSWRTAELTVTTTSPQALLLDGELLEEITMAQFAAVPRSLWVQLPPKAATPPEESP >Mature_311_residues MKKVHLIFNPVSGAGHAPQELEQIRAKLLDQVELEIQFTSPEESATALAETAIAQGADLIIASGGDGTVSAVATVLMHSN IPLAVIPRGTANAFAAALDIPTAIDQACDVILQGQPQQIDCATCNGQPMILLAGIGLEAATIGETDRDSKQRFGFFAYLS TAVQQLQKLQPFQATLDFGDRQQTFDDVLAITVANLAPSTSILAQGTGGASGQDALLDVTVLTMADEGELFGLLSASYEL FQAALQDNPADHPHIQSWRTAELTVTTTSPQALLLDGELLEEITMAQFAAVPRSLWVQLPPKAATPPEESP
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=282, Percent_Identity=27.6595744680851, Blast_Score=71, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001206 - InterPro: IPR004363 - InterPro: IPR018148 - InterPro: IPR011607 [H]
Pfam domain/function: PF00781 DAGK_cat; PF02142 MGS [H]
EC number: NA
Molecular weight: Translated: 32824; Mature: 32824
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVHLIFNPVSGAGHAPQELEQIRAKLLDQVELEIQFTSPEESATALAETAIAQGADLI CCEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCEE IASGGDGTVSAVATVLMHSNIPLAVIPRGTANAFAAALDIPTAIDQACDVILQGQPQQID EEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHEECCCCCEEE CATCNGQPMILLAGIGLEAATIGETDRDSKQRFGFFAYLSTAVQQLQKLQPFQATLDFGD EEECCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC RQQTFDDVLAITVANLAPSTSILAQGTGGASGQDALLDVTVLTMADEGELFGLLSASYEL CHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCCCEEHHHHHHHHH FQAALQDNPADHPHIQSWRTAELTVTTTSPQALLLDGELLEEITMAQFAAVPRSLWVQLP HHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEECHHHHHHHHHHHHHHCCHHHEEECC PKAATPPEESP CCCCCCCCCCC >Mature Secondary Structure MKKVHLIFNPVSGAGHAPQELEQIRAKLLDQVELEIQFTSPEESATALAETAIAQGADLI CCEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCEE IASGGDGTVSAVATVLMHSNIPLAVIPRGTANAFAAALDIPTAIDQACDVILQGQPQQID EEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHEECCCCCEEE CATCNGQPMILLAGIGLEAATIGETDRDSKQRFGFFAYLSTAVQQLQKLQPFQATLDFGD EEECCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC RQQTFDDVLAITVANLAPSTSILAQGTGGASGQDALLDVTVLTMADEGELFGLLSASYEL CHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCCCEEHHHHHHHHH FQAALQDNPADHPHIQSWRTAELTVTTTSPQALLLDGELLEEITMAQFAAVPRSLWVQLP HHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEECHHHHHHHHHHHHHHCCHHHEEECC PKAATPPEESP CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]