Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is yegS [C]

Identifier: 170078677

GI number: 170078677

Start: 2155466

End: 2156401

Strand: Reverse

Name: yegS [C]

Synonym: SYNPCC7002_A2073

Alternate gene names: 170078677

Gene position: 2156401-2155466 (Counterclockwise)

Preceding gene: 170078678

Following gene: 170078674

Centisome position: 71.69

GC content: 55.34

Gene sequence:

>936_bases
ATGAAAAAAGTGCATCTCATTTTTAATCCGGTATCCGGTGCGGGCCATGCCCCCCAGGAACTGGAACAAATTCGAGCCAA
GCTCCTCGATCAGGTTGAGCTTGAGATTCAATTTACCTCCCCCGAAGAAAGTGCGACGGCCTTGGCAGAAACGGCGATCG
CCCAGGGAGCTGATCTCATCATTGCGTCTGGGGGCGACGGCACTGTTTCAGCGGTGGCGACAGTTTTGATGCACAGTAAT
ATTCCCCTGGCCGTTATTCCCCGGGGGACGGCCAATGCCTTCGCGGCGGCCTTAGATATTCCCACAGCTATCGACCAAGC
CTGTGATGTGATTTTGCAGGGACAGCCCCAACAGATCGACTGCGCCACCTGCAATGGTCAACCGATGATTCTTTTGGCTG
GGATTGGCCTAGAGGCGGCGACCATTGGCGAAACTGACCGGGATAGTAAACAACGGTTTGGTTTCTTTGCCTATTTGTCC
ACGGCAGTACAACAACTGCAAAAGCTGCAACCCTTCCAGGCGACCCTCGATTTTGGCGATCGCCAACAAACCTTTGATGA
TGTGCTCGCGATCACCGTAGCGAACTTGGCCCCCAGCACTTCAATTTTGGCCCAGGGAACGGGCGGGGCCTCGGGTCAAG
ATGCCCTACTCGATGTCACCGTTCTCACCATGGCTGACGAGGGAGAGCTTTTTGGTTTGCTCAGTGCATCCTACGAATTA
TTCCAGGCGGCTCTCCAAGACAATCCCGCTGATCATCCCCACATCCAATCTTGGCGCACCGCCGAGTTAACAGTAACCAC
CACGTCGCCCCAGGCTCTACTCTTAGACGGAGAATTGCTAGAGGAAATAACCATGGCCCAGTTCGCGGCGGTACCCCGGA
GCCTCTGGGTGCAGCTTCCCCCTAAAGCGGCAACCCCCCCTGAAGAATCACCGTAA

Upstream 100 bases:

>100_bases
TTATCATTACTGACCTCGCCCAGGAACAACTCCAAGCGGCGATCGCCACGGTACTCTAGGAAGTCTAGGGCGAACTTTTC
ATATCCCCTCGTAGAACACG

Downstream 100 bases:

>100_bases
TCCCTGCAATTAATAAACTCAAACCAATGAGTCCTAAGCTCCCCAAAATAATCACAATACGGGCGCGGGGTTGGTGGCTA
ATCACCCAAGGGATGAGGAT

Product: putative lipid kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKKVHLIFNPVSGAGHAPQELEQIRAKLLDQVELEIQFTSPEESATALAETAIAQGADLIIASGGDGTVSAVATVLMHSN
IPLAVIPRGTANAFAAALDIPTAIDQACDVILQGQPQQIDCATCNGQPMILLAGIGLEAATIGETDRDSKQRFGFFAYLS
TAVQQLQKLQPFQATLDFGDRQQTFDDVLAITVANLAPSTSILAQGTGGASGQDALLDVTVLTMADEGELFGLLSASYEL
FQAALQDNPADHPHIQSWRTAELTVTTTSPQALLLDGELLEEITMAQFAAVPRSLWVQLPPKAATPPEESP

Sequences:

>Translated_311_residues
MKKVHLIFNPVSGAGHAPQELEQIRAKLLDQVELEIQFTSPEESATALAETAIAQGADLIIASGGDGTVSAVATVLMHSN
IPLAVIPRGTANAFAAALDIPTAIDQACDVILQGQPQQIDCATCNGQPMILLAGIGLEAATIGETDRDSKQRFGFFAYLS
TAVQQLQKLQPFQATLDFGDRQQTFDDVLAITVANLAPSTSILAQGTGGASGQDALLDVTVLTMADEGELFGLLSASYEL
FQAALQDNPADHPHIQSWRTAELTVTTTSPQALLLDGELLEEITMAQFAAVPRSLWVQLPPKAATPPEESP
>Mature_311_residues
MKKVHLIFNPVSGAGHAPQELEQIRAKLLDQVELEIQFTSPEESATALAETAIAQGADLIIASGGDGTVSAVATVLMHSN
IPLAVIPRGTANAFAAALDIPTAIDQACDVILQGQPQQIDCATCNGQPMILLAGIGLEAATIGETDRDSKQRFGFFAYLS
TAVQQLQKLQPFQATLDFGDRQQTFDDVLAITVANLAPSTSILAQGTGGASGQDALLDVTVLTMADEGELFGLLSASYEL
FQAALQDNPADHPHIQSWRTAELTVTTTSPQALLLDGELLEEITMAQFAAVPRSLWVQLPPKAATPPEESP

Specific function: Unknown

COG id: COG1597

COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DAGKc domain [H]

Homologues:

Organism=Escherichia coli, GI1788402, Length=282, Percent_Identity=27.6595744680851, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001206
- InterPro:   IPR004363
- InterPro:   IPR018148
- InterPro:   IPR011607 [H]

Pfam domain/function: PF00781 DAGK_cat; PF02142 MGS [H]

EC number: NA

Molecular weight: Translated: 32824; Mature: 32824

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVHLIFNPVSGAGHAPQELEQIRAKLLDQVELEIQFTSPEESATALAETAIAQGADLI
CCEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCEE
IASGGDGTVSAVATVLMHSNIPLAVIPRGTANAFAAALDIPTAIDQACDVILQGQPQQID
EEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHEECCCCCEEE
CATCNGQPMILLAGIGLEAATIGETDRDSKQRFGFFAYLSTAVQQLQKLQPFQATLDFGD
EEECCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
RQQTFDDVLAITVANLAPSTSILAQGTGGASGQDALLDVTVLTMADEGELFGLLSASYEL
CHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCCCEEHHHHHHHHH
FQAALQDNPADHPHIQSWRTAELTVTTTSPQALLLDGELLEEITMAQFAAVPRSLWVQLP
HHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEECHHHHHHHHHHHHHHCCHHHEEECC
PKAATPPEESP
CCCCCCCCCCC
>Mature Secondary Structure
MKKVHLIFNPVSGAGHAPQELEQIRAKLLDQVELEIQFTSPEESATALAETAIAQGADLI
CCEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCEE
IASGGDGTVSAVATVLMHSNIPLAVIPRGTANAFAAALDIPTAIDQACDVILQGQPQQID
EEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHEECCCCCEEE
CATCNGQPMILLAGIGLEAATIGETDRDSKQRFGFFAYLSTAVQQLQKLQPFQATLDFGD
EEECCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
RQQTFDDVLAITVANLAPSTSILAQGTGGASGQDALLDVTVLTMADEGELFGLLSASYEL
CHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCCCEEHHHHHHHHH
FQAALQDNPADHPHIQSWRTAELTVTTTSPQALLLDGELLEEITMAQFAAVPRSLWVQLP
HHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEECHHHHHHHHHHHHHHCCHHHEEECC
PKAATPPEESP
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]