Click here to switch to the map view.

The map label for this gene is tadA [H]

Identifier: 170078671

GI number: 170078671

Start: 2150061

End: 2150537

Strand: Reverse

Name: tadA [H]

Synonym: SYNPCC7002_A2067

Alternate gene names: 170078671

Gene position: 2150537-2150061 (Counterclockwise)

Preceding gene: 170078672

Following gene: 170078670

Centisome position: 71.49

GC content: 51.15

Gene sequence:

>477_bases
GTGATTACCCAAGCAGAATATCGACGCCATTATCACTGGATGCAAAAGGCGATCGCCCTCGCAAAAGTTGCCGGACAATC
TGGAGAAATCCCCGTCGGTGCTGTGATTGTTGATGGCAAAAATCAATGCCTTGCCCAGAGTGGTAATCGCAAAGAAAAAA
CCCAAGATCCCACCGCCCACGCCGAAATGCTGGTGATCCGTGCCGCCAGCCAGATGCGCCAAGATTGGCATCTCCAGGAC
TGCACCCTCTATGTCACTCTCGAACCCTGTCCCATGTGTGCCGGAGCGATGATTCACAGCCGTCTTAAGCAAGTCGTTTA
TGGTGCTGATGATCCGAAAACAGGCGCTCTACGCAGTATGGCTAATTTTCCCGATGCTCCCTTTTCTAATCATTCTTTCC
CAGTTCTTGGTGGGATCGCAGCAATGGAATGTCGGCAACTTCTCCAGAATTGGTTTCAACACAATTGCCGTCCCTGA

Upstream 100 bases:

>100_bases
GCACTGTCCCCCAGATTTTCATCAACAACGCCCACATCGGCGGTTGCACAGATTTATTCGCCCTTGAACAAAAAGGCGAG
CTAAACGTATTACTACACCA

Downstream 100 bases:

>100_bases
CGCATAATGGGAGGCAAGTATTTATGTTGTCATCTACGGTTTTTGAGTGCCCATGATCTTGACGGGACAATCCAGTAGCC
CTGCCACCACGGCCCCAACT

Product: cytidine and deoxycytidylate deaminase zinc-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MITQAEYRRHYHWMQKAIALAKVAGQSGEIPVGAVIVDGKNQCLAQSGNRKEKTQDPTAHAEMLVIRAASQMRQDWHLQD
CTLYVTLEPCPMCAGAMIHSRLKQVVYGADDPKTGALRSMANFPDAPFSNHSFPVLGGIAAMECRQLLQNWFQHNCRP

Sequences:

>Translated_158_residues
MITQAEYRRHYHWMQKAIALAKVAGQSGEIPVGAVIVDGKNQCLAQSGNRKEKTQDPTAHAEMLVIRAASQMRQDWHLQD
CTLYVTLEPCPMCAGAMIHSRLKQVVYGADDPKTGALRSMANFPDAPFSNHSFPVLGGIAAMECRQLLQNWFQHNCRP
>Mature_158_residues
MITQAEYRRHYHWMQKAIALAKVAGQSGEIPVGAVIVDGKNQCLAQSGNRKEKTQDPTAHAEMLVIRAASQMRQDWHLQD
CTLYVTLEPCPMCAGAMIHSRLKQVVYGADDPKTGALRSMANFPDAPFSNHSFPVLGGIAAMECRQLLQNWFQHNCRP

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=154, Percent_Identity=31.1688311688312, Blast_Score=76, Evalue=1e-14,
Organism=Escherichia coli, GI145693172, Length=152, Percent_Identity=46.0526315789474, Blast_Score=136, Evalue=8e-34,
Organism=Caenorhabditis elegans, GI17541138, Length=147, Percent_Identity=31.9727891156463, Blast_Score=80, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17554608, Length=100, Percent_Identity=42, Blast_Score=71, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17555996, Length=102, Percent_Identity=36.2745098039216, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21355527, Length=149, Percent_Identity=28.8590604026846, Blast_Score=74, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 17620; Mature: 17620

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITQAEYRRHYHWMQKAIALAKVAGQSGEIPVGAVIVDGKNQCLAQSGNRKEKTQDPTAH
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCHHH
AEMLVIRAASQMRQDWHLQDCTLYVTLEPCPMCAGAMIHSRLKQVVYGADDPKTGALRSM
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ANFPDAPFSNHSFPVLGGIAAMECRQLLQNWFQHNCRP
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MITQAEYRRHYHWMQKAIALAKVAGQSGEIPVGAVIVDGKNQCLAQSGNRKEKTQDPTAH
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCHHH
AEMLVIRAASQMRQDWHLQDCTLYVTLEPCPMCAGAMIHSRLKQVVYGADDPKTGALRSM
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ANFPDAPFSNHSFPVLGGIAAMECRQLLQNWFQHNCRP
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]