| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078612
Identifier: 170078612
GI number: 170078612
Start: 2084989
End: 2085483
Strand: Direct
Name: 170078612
Synonym: SYNPCC7002_A2008
Alternate gene names: NA
Gene position: 2084989-2085483 (Clockwise)
Preceding gene: 170078611
Following gene: 170078614
Centisome position: 69.31
GC content: 51.52
Gene sequence:
>495_bases ATGACAAAATTTTATGCACCGACCATTATTGGGGCAACAACGCTCCTGACCATTGCTGCTGGTCTTGGTGGTATTCAAGG GGCGATCGCCGGCCCGGAAACCTTTACGATCGCCGCTAACGGAGCCATTACCTCCAATGAAGTCTTTAACGGGACAATCA CCGGCCAGGCTGGGGGGCCAACCAATAGTAACTTTTGTGGCTGGATTGCCAATCGCCCCAACCACACCTTTCGCATTAAT GGCAATGGCCTGATGTCTCTCAATCTCAGCGTTGTCGATCCTAACGGTGGCGTTTCCAGACCCTTTACGCTTCTGATCAA AAATGCCGATGATCCCAGTGCAGATCCCTTCTGTGCGATCGCCGATCCTTTTAGCGGGATTCCTGCCGAAATTGGTGGTG TTTGGAATCCAGGCCGCTACCAAGTCTTTATCGGCAACTTTGAACAGGCTGGTAATGCAGGTCGCGCTCCCTACGTTTTA CAAATTTCCCAGTAG
Upstream 100 bases:
>100_bases TAGTGGAACTTTCCTGGAATCTTTTCTTTCATAGAGCCTAGACGCTCACTTTATCGAGGGAGCCTCTGACGGTATAACCC AACTGGGGAGGGGGACAGCC
Downstream 100 bases:
>100_bases CATCAACAACCGTCGGTTCCCCAAAATAATTCTCTGGAAAATCAATTAAAAAATTGCCCTCCTCTCTTAATTTTGAAAGG GGGGCAGTTTTTATGGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTKFYAPTIIGATTLLTIAAGLGGIQGAIAGPETFTIAANGAITSNEVFNGTITGQAGGPTNSNFCGWIANRPNHTFRIN GNGLMSLNLSVVDPNGGVSRPFTLLIKNADDPSADPFCAIADPFSGIPAEIGGVWNPGRYQVFIGNFEQAGNAGRAPYVL QISQ
Sequences:
>Translated_164_residues MTKFYAPTIIGATTLLTIAAGLGGIQGAIAGPETFTIAANGAITSNEVFNGTITGQAGGPTNSNFCGWIANRPNHTFRIN GNGLMSLNLSVVDPNGGVSRPFTLLIKNADDPSADPFCAIADPFSGIPAEIGGVWNPGRYQVFIGNFEQAGNAGRAPYVL QISQ >Mature_163_residues TKFYAPTIIGATTLLTIAAGLGGIQGAIAGPETFTIAANGAITSNEVFNGTITGQAGGPTNSNFCGWIANRPNHTFRING NGLMSLNLSVVDPNGGVSRPFTLLIKNADDPSADPFCAIADPFSGIPAEIGGVWNPGRYQVFIGNFEQAGNAGRAPYVLQ ISQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16929; Mature: 16798
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFYAPTIIGATTLLTIAAGLGGIQGAIAGPETFTIAANGAITSNEVFNGTITGQAGGP CCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEECCCEEEEEEECCCCCC TNSNFCGWIANRPNHTFRINGNGLMSLNLSVVDPNGGVSRPFTLLIKNADDPSADPFCAI CCCCEEEEEECCCCCEEEECCCEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEE ADPFSGIPAEIGGVWNPGRYQVFIGNFEQAGNAGRAPYVLQISQ CCCCCCCCHHHCCCCCCCEEEEEEECCHHCCCCCCCCEEEEECC >Mature Secondary Structure TKFYAPTIIGATTLLTIAAGLGGIQGAIAGPETFTIAANGAITSNEVFNGTITGQAGGP CEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEECCCEEEEEEECCCCCC TNSNFCGWIANRPNHTFRINGNGLMSLNLSVVDPNGGVSRPFTLLIKNADDPSADPFCAI CCCCEEEEEECCCCCEEEECCCEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEE ADPFSGIPAEIGGVWNPGRYQVFIGNFEQAGNAGRAPYVLQISQ CCCCCCCCHHHCCCCCCCEEEEEEECCHHCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA