| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078544
Identifier: 170078544
GI number: 170078544
Start: 2023221
End: 2023457
Strand: Reverse
Name: 170078544
Synonym: SYNPCC7002_A1939
Alternate gene names: NA
Gene position: 2023457-2023221 (Counterclockwise)
Preceding gene: 170078547
Following gene: 170078542
Centisome position: 67.27
GC content: 44.3
Gene sequence:
>237_bases GTGTTATTGTCGAAAAAAGAAGTTCAGAAAATTACTATTAATCCGATGCGCATCAAAAGTTGGGAAAGTCCCCGGCGTCG GGGTCGTAACGACAAAGGCAAAGGCGGCGCGGCCCGTCAACGGCAACTAAAAAAACGCAATAAAATGCTCAAAAACAAGC TCAAAGGCAATGACCACGGAGGGGAAATTAATCCCCTCTTTTTTATGGCTTCTACGACCCACTCAGATAACAATTAA
Upstream 100 bases:
>100_bases GATCGCACCATAATCTCCCAGAAAAAAGTCGTTTTTATCATAGGCTGAAAGTCTAACCCATGGCTGAGTTTTAGGCCGCG CAGAAAAATCTAGGCTATTT
Downstream 100 bases:
>100_bases CGAGGCGATCGCCACCGCTTAGTTTCACCAATTTTTGTCCGGGGCTATCCTTTTCGGTGAGGTTGAATTTACTGAAGGGC AACAGATCGAGGTTTTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MLLSKKEVQKITINPMRIKSWESPRRRGRNDKGKGGAARQRQLKKRNKMLKNKLKGNDHGGEINPLFFMASTTHSDNN
Sequences:
>Translated_78_residues MLLSKKEVQKITINPMRIKSWESPRRRGRNDKGKGGAARQRQLKKRNKMLKNKLKGNDHGGEINPLFFMASTTHSDNN >Mature_78_residues MLLSKKEVQKITINPMRIKSWESPRRRGRNDKGKGGAARQRQLKKRNKMLKNKLKGNDHGGEINPLFFMASTTHSDNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8989; Mature: 8989
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSKKEVQKITINPMRIKSWESPRRRGRNDKGKGGAARQRQLKKRNKMLKNKLKGNDHG CCCCCCCCEEECCCCEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC GEINPLFFMASTTHSDNN CCCCEEEEEEECCCCCCC >Mature Secondary Structure MLLSKKEVQKITINPMRIKSWESPRRRGRNDKGKGGAARQRQLKKRNKMLKNKLKGNDHG CCCCCCCCEEECCCCEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC GEINPLFFMASTTHSDNN CCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA