Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078539

Identifier: 170078539

GI number: 170078539

Start: 2016420

End: 2017292

Strand: Direct

Name: 170078539

Synonym: SYNPCC7002_A1934

Alternate gene names: NA

Gene position: 2016420-2017292 (Clockwise)

Preceding gene: 170078538

Following gene: 170078540

Centisome position: 67.03

GC content: 48.0

Gene sequence:

>873_bases
ATGTTTCATAGCGCCTTAGTCTGTACAGATTTTTCCGATGGCTTAGATCGACTCACTGGCTGCATCGCAAATCTGGTACA
GGGAGGACTATCCCGGATTGTTTTTTTCCACAGTGTGCCCCTCTGGACAGAAGGCAATATCCCCCGCATTGACAAAGAAA
AAGTTGCCGCTGCCCAAGCCCATCTTTCCAAGGCCCTCACCCAGGTGCCGGCTGGTGCAGATGTCAAAGTAGAAATTGTT
TCTGGGAATGCCCTCGATAATATTCCCCAAGTCCTTGAGCAATATCAATGTGATGTCATTTTGGTGGGCACCCCCATCAA
AAATTTAATCCAAGAAAAAATGTTTGGTAGTACGAGCCTGGGTCTGATCAAGTCTCTTAAAAAGCCGATCATGATCCTCC
GGCCCCAGATTGTCTCTACCTATACTTGTGAGGAGTTGGCGCTGCGTTGCCGCCATCTGTGGCGATATCTGCTGCTTCCC
TACAATGGCAGTGATGAGGCGAAGTATTTAATTGAACAGGTGAAGACTTTTGCGAAAAATGCGCCCCAAGGGGCGATCGC
CAATTGTTTTTTGTTGTCCGTCCTTGATAATTCTGGTATCCAGCGCATTCAGATTGAATATCTCCAAAAGGAAGCCGAGG
AAAAACTCGCGAAGGTTAAAGGAGAGCTAGAAGCCTTGGGACTGACGGTCAAAACCGCCGTTAAAATTGGCAATCCCCTC
AGTGAAACCCTCGACATTGCCGTCAAAGAAGATATTAGTGCGATCGCCATCGCCAGCAAACCCCGCAATCAACTCCTTGA
ACTTACAGTACACAGCTATGCCAGCGATTTGTTACACCGCAGTTGGTTCCCGACCCTATTTTTCCCGATGTAG

Upstream 100 bases:

>100_bases
TTCCAAACGATTTATTGACTTACAGTTCAACTTCTTCGGGGAGAAGTGCTACCGTAAAGAAAATTTTGATTCTTAGCCCA
CAGTTTTTAGCGATATTGCC

Downstream 100 bases:

>100_bases
GTGATTCAGAAGTATGTAAAGGCGATCGCCCTTGCCGTAATTTAGACCGTAGATTTTGTGGAAAATCAAGGGATTTCTGG
AGAAAAACTCAAATGTAACG

Product: universal stress protein family protein

Products: NA

Alternate protein names: Universal Stress Protein; UspA Domain-Containing Protein; Universal Stress Protein Family; Universal Stress Protein Family Protein

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MFHSALVCTDFSDGLDRLTGCIANLVQGGLSRIVFFHSVPLWTEGNIPRIDKEKVAAAQAHLSKALTQVPAGADVKVEIV
SGNALDNIPQVLEQYQCDVILVGTPIKNLIQEKMFGSTSLGLIKSLKKPIMILRPQIVSTYTCEELALRCRHLWRYLLLP
YNGSDEAKYLIEQVKTFAKNAPQGAIANCFLLSVLDNSGIQRIQIEYLQKEAEEKLAKVKGELEALGLTVKTAVKIGNPL
SETLDIAVKEDISAIAIASKPRNQLLELTVHSYASDLLHRSWFPTLFFPM

Sequences:

>Translated_290_residues
MFHSALVCTDFSDGLDRLTGCIANLVQGGLSRIVFFHSVPLWTEGNIPRIDKEKVAAAQAHLSKALTQVPAGADVKVEIV
SGNALDNIPQVLEQYQCDVILVGTPIKNLIQEKMFGSTSLGLIKSLKKPIMILRPQIVSTYTCEELALRCRHLWRYLLLP
YNGSDEAKYLIEQVKTFAKNAPQGAIANCFLLSVLDNSGIQRIQIEYLQKEAEEKLAKVKGELEALGLTVKTAVKIGNPL
SETLDIAVKEDISAIAIASKPRNQLLELTVHSYASDLLHRSWFPTLFFPM
>Mature_290_residues
MFHSALVCTDFSDGLDRLTGCIANLVQGGLSRIVFFHSVPLWTEGNIPRIDKEKVAAAQAHLSKALTQVPAGADVKVEIV
SGNALDNIPQVLEQYQCDVILVGTPIKNLIQEKMFGSTSLGLIKSLKKPIMILRPQIVSTYTCEELALRCRHLWRYLLLP
YNGSDEAKYLIEQVKTFAKNAPQGAIANCFLLSVLDNSGIQRIQIEYLQKEAEEKLAKVKGELEALGLTVKTAVKIGNPL
SETLDIAVKEDISAIAIASKPRNQLLELTVHSYASDLLHRSWFPTLFFPM

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32058; Mature: 32058

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHSALVCTDFSDGLDRLTGCIANLVQGGLSRIVFFHSVPLWTEGNIPRIDKEKVAAAQA
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHH
HLSKALTQVPAGADVKVEIVSGNALDNIPQVLEQYQCDVILVGTPIKNLIQEKMFGSTSL
HHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCHH
GLIKSLKKPIMILRPQIVSTYTCEELALRCRHLWRYLLLPYNGSDEAKYLIEQVKTFAKN
HHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
APQGAIANCFLLSVLDNSGIQRIQIEYLQKEAEEKLAKVKGELEALGLTVKTAVKIGNPL
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
SETLDIAVKEDISAIAIASKPRNQLLELTVHSYASDLLHRSWFPTLFFPM
HHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure
MFHSALVCTDFSDGLDRLTGCIANLVQGGLSRIVFFHSVPLWTEGNIPRIDKEKVAAAQA
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHH
HLSKALTQVPAGADVKVEIVSGNALDNIPQVLEQYQCDVILVGTPIKNLIQEKMFGSTSL
HHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCHH
GLIKSLKKPIMILRPQIVSTYTCEELALRCRHLWRYLLLPYNGSDEAKYLIEQVKTFAKN
HHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
APQGAIANCFLLSVLDNSGIQRIQIEYLQKEAEEKLAKVKGELEALGLTVKTAVKIGNPL
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
SETLDIAVKEDISAIAIASKPRNQLLELTVHSYASDLLHRSWFPTLFFPM
HHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA