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The map label for this gene is petA

Identifier: 170078515

GI number: 170078515

Start: 1995593

End: 1996570

Strand: Direct

Name: petA

Synonym: SYNPCC7002_A1910

Alternate gene names: 170078515

Gene position: 1995593-1996570 (Clockwise)

Preceding gene: 170078514

Following gene: 170078521

Centisome position: 66.34

GC content: 51.84

Gene sequence:

>978_bases
ATGAAAACACCTGAACTGATGGCAATCTGGCAACGGCTAAAGACCGCCTGCCTCGTGGCGATCGCCACCTTTGGTTTATT
TTTCGCCAGTGACGTCCTTTTCCCCCAAGCCGCTGCCGCCTATCCTTTTTGGGCCCAGCAAACCGCCCCAGAAACGCCCC
GTGAAGCAACAGGCCGGATCGTCTGTGCCAACTGTCACCTCGCTGCCAAAGAAGCCGAGGTGGAAATTCCCCAGTCCGTT
TTACCCGATCAAGTTTTTGAAGCCGTTGTCAAAATTCCCTATGACCATAGCCAACAGCAGGTTCTAGGGGACGGCTCAAA
GGGTGGCCTCAACGTTGGTGCTGTTTTGATGCTTCCTGACGGTTTCAAAATTGCGCCCGCTGATCGTCTCTCTGACGAAC
TGAAGGAAAAAACCGAAGGTCTCTACTTCCAGTCCTACGCTCCGGATCAAGAAAACGTTGTGATCATTGGGCCGATTTCC
GGTGATCAATACGAAGAGATCGTTTTCCCAGTACTCTCCCCCGATCCGAAAACCGATAAGAACATCAACTACGGTAAATA
TGCAGTCCACCTCGGTGCGAACCGTGGCCGTGGTCAAGTTTATCCCACTGGTGAACTAAGCAATAACAATCAATTTAAAG
CGTCCGCTACCGGCACCATCACCAATATTGCGGTGAATGAGGCTGCGGGCACTGATATCACCATTTCCACTGAAGCGGGC
GAAGTGATCGATACGATCCCGGCTGGCCCCGAAGTGATTGTTTCTGAAGGTCAGGCGATCGCCGCTGGTGAAGCCCTCAC
GAACAACCCCAACGTCGGTGGATTTGGCCAAAAAGATACAGAAGTTGTCCTCCAGAATCCCGCTCGCATCTATGGCTACA
TGGCCTTTGTTGCTGGGATTATGTTGACTCAAATCTTCCTCGTTCTGAAGAAGAAACAGGTAGAACGGGTTCAAGCCGCT
GGCCAACTCGACTTCTAA

Upstream 100 bases:

>100_bases
ACTGGACAGAAACTGATTTCCGTACTGACGAAGCTCCTTGGTGGGCCTAAAAACCCCATACGGGTTCATCCATTAGAGAA
AACGCTTGTAAAAATTTACG

Downstream 100 bases:

>100_bases
ATTACAAGAAATTTAAAATTGTGCGAAGGCAGACTCCGGTCTGTCTTTTTTATTGCTGATGTGCTTGATTTGCCGCCATC
AATGTTTTCAAAGTTTCCAT

Product: apocytochrome f

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKTPELMAIWQRLKTACLVAIATFGLFFASDVLFPQAAAAYPFWAQQTAPETPREATGRIVCANCHLAAKEAEVEIPQSV
LPDQVFEAVVKIPYDHSQQQVLGDGSKGGLNVGAVLMLPDGFKIAPADRLSDELKEKTEGLYFQSYAPDQENVVIIGPIS
GDQYEEIVFPVLSPDPKTDKNINYGKYAVHLGANRGRGQVYPTGELSNNNQFKASATGTITNIAVNEAAGTDITISTEAG
EVIDTIPAGPEVIVSEGQAIAAGEALTNNPNVGGFGQKDTEVVLQNPARIYGYMAFVAGIMLTQIFLVLKKKQVERVQAA
GQLDF

Sequences:

>Translated_325_residues
MKTPELMAIWQRLKTACLVAIATFGLFFASDVLFPQAAAAYPFWAQQTAPETPREATGRIVCANCHLAAKEAEVEIPQSV
LPDQVFEAVVKIPYDHSQQQVLGDGSKGGLNVGAVLMLPDGFKIAPADRLSDELKEKTEGLYFQSYAPDQENVVIIGPIS
GDQYEEIVFPVLSPDPKTDKNINYGKYAVHLGANRGRGQVYPTGELSNNNQFKASATGTITNIAVNEAAGTDITISTEAG
EVIDTIPAGPEVIVSEGQAIAAGEALTNNPNVGGFGQKDTEVVLQNPARIYGYMAFVAGIMLTQIFLVLKKKQVERVQAA
GQLDF
>Mature_325_residues
MKTPELMAIWQRLKTACLVAIATFGLFFASDVLFPQAAAAYPFWAQQTAPETPREATGRIVCANCHLAAKEAEVEIPQSV
LPDQVFEAVVKIPYDHSQQQVLGDGSKGGLNVGAVLMLPDGFKIAPADRLSDELKEKTEGLYFQSYAPDQENVVIIGPIS
GDQYEEIVFPVLSPDPKTDKNINYGKYAVHLGANRGRGQVYPTGELSNNNQFKASATGTITNIAVNEAAGTDITISTEAG
EVIDTIPAGPEVIVSEGQAIAAGEALTNNPNVGGFGQKDTEVVLQNPARIYGYMAFVAGIMLTQIFLVLKKKQVERVQAA
GQLDF

Specific function: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome f family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYF_SYNP2 (P26293)

Other databases:

- EMBL:   M74514
- EMBL:   CP000951
- RefSeq:   YP_001735153.1
- ProteinModelPortal:   P26293
- SMR:   P26293
- GeneID:   6055867
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1910
- HOGENOM:   HBG750208
- OMA:   AYPFWAQ
- ProtClustDB:   PRK02693
- GO:   GO:0015979
- GO:   GO:0006810
- HAMAP:   MF_00610
- InterPro:   IPR002325
- InterPro:   IPR011054
- Gene3D:   G3DSA:2.60.40.830
- PRINTS:   PR00610

Pfam domain/function: PF01333 Apocytochr_F_C; SSF49441 Apocyt_F; SSF51246 Rudmnt_hyb_motif

EC number: NA

Molecular weight: Translated: 34875; Mature: 34875

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS51010 CYTF

Important sites: BINDING 62-62 BINDING 65-65

Signals:

None

Transmembrane regions:

HASH(0x1cad534c)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPELMAIWQRLKTACLVAIATFGLFFASDVLFPQAAAAYPFWAQQTAPETPREATGRI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHCCCCCCCCHHHCCCE
VCANCHLAAKEAEVEIPQSVLPDQVFEAVVKIPYDHSQQQVLGDGSKGGLNVGAVLMLPD
EEEECEEECCCCCCCCCHHHCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEEEEECCC
GFKIAPADRLSDELKEKTEGLYFQSYAPDQENVVIIGPISGDQYEEIVFPVLSPDPKTDK
CCEECCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCC
NINYGKYAVHLGANRGRGQVYPTGELSNNNQFKASATGTITNIAVNEAAGTDITISTEAG
CCCCCEEEEEECCCCCCCCEEECCCCCCCCEEEEECCCEEEEEEEECCCCCCEEEECCCC
EVIDTIPAGPEVIVSEGQAIAAGEALTNNPNVGGFGQKDTEVVLQNPARIYGYMAFVAGI
CHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHH
MLTQIFLVLKKKQVERVQAAGQLDF
HHHHHHHHHHHHHHHHHHHCCCCCH
>Mature Secondary Structure
MKTPELMAIWQRLKTACLVAIATFGLFFASDVLFPQAAAAYPFWAQQTAPETPREATGRI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHCCCCCCCCHHHCCCE
VCANCHLAAKEAEVEIPQSVLPDQVFEAVVKIPYDHSQQQVLGDGSKGGLNVGAVLMLPD
EEEECEEECCCCCCCCCHHHCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEEEEECCC
GFKIAPADRLSDELKEKTEGLYFQSYAPDQENVVIIGPISGDQYEEIVFPVLSPDPKTDK
CCEECCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCC
NINYGKYAVHLGANRGRGQVYPTGELSNNNQFKASATGTITNIAVNEAAGTDITISTEAG
CCCCCEEEEEECCCCCCCCEEECCCCCCCCEEEEECCCEEEEEEEECCCCCCEEEECCCC
EVIDTIPAGPEVIVSEGQAIAAGEALTNNPNVGGFGQKDTEVVLQNPARIYGYMAFVAGI
CHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHH
MLTQIFLVLKKKQVERVQAAGQLDF
HHHHHHHHHHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1421151