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The map label for this gene is exoD

Identifier: 170078506

GI number: 170078506

Start: 1986876

End: 1987511

Strand: Reverse

Name: exoD

Synonym: SYNPCC7002_A1901

Alternate gene names: NA

Gene position: 1987511-1986876 (Counterclockwise)

Preceding gene: 170078507

Following gene: 170078505

Centisome position: 66.07

GC content: 53.3

Gene sequence:

>636_bases
ATGGCTCGCCTCTCCCAAGAATTGCACCGTTATTTTTTTGAAGAAGACCGTGGTGAAACCGTTAGTTTAGCCCAGGCGAT
CGCCCTCGCAGAGGAAAAAGTCTTTGGGGTCATTTTGCTGCTGTTGGCCTTTCCGTCGGCCCTGCCAATTCCGGCCCCAG
GCTATTCGACGCCCTTTGGGATTTTAATTTTTGCGATCGCCCTCCAGTTGATTTTTGGGCGGAAAAAACTCTGGCTTCCG
GTTGCTTGGCAACGAAAAACCGTCAAAACGACCATGGCCCAGGGCATCCTGAAAAAAGGTCTCCCTTGGCTCAAAAAAAT
TGAGGCGATCGCCCATCCCCGGTTTCCCATCGTTTGCCAGAGTCGCCTGGGTCGCACTGTCATGGGTTGTACCATTGCCC
TGATGGCTACCTCCATGATGATCCCCATTCCCGGCACCAATACCCTCCCGGCCATGGCGATCTTCCTCACCGCCTTTGGC
CTCCAAGAGGACGATGGCTTGATCAGTGGCGCTGGGGTTGTTTTCTCCATTGTCATTGCTGTGCTGATGGTGTCTGTGAT
TTATGTGTTCTTCAACGGTGGCCTCAGCCTATTGGATCTGCTCAAAGACTGGGTCACGGTACGATTAGGGGGCTAG

Upstream 100 bases:

>100_bases
GATGATCTCCCCCCCCGGTGGGGAGATTTTTTTGTAAACACAATTAACGGACGGGCATTGCGCTATGCTCAGTAGCTGTC
CCTCTGCGTAACATTTGGCT

Downstream 100 bases:

>100_bases
TTGTTTTCGTTTTGTTGCCGCCATGTCCCAGTTCCCATCCCTAGAAGCCGCCCTCAAACACTTCTTTGGATATGACAATT
TTCGCCATGGCCAAAAGGCG

Product: exopolysaccharide synthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MARLSQELHRYFFEEDRGETVSLAQAIALAEEKVFGVILLLLAFPSALPIPAPGYSTPFGILIFAIALQLIFGRKKLWLP
VAWQRKTVKTTMAQGILKKGLPWLKKIEAIAHPRFPIVCQSRLGRTVMGCTIALMATSMMIPIPGTNTLPAMAIFLTAFG
LQEDDGLISGAGVVFSIVIAVLMVSVIYVFFNGGLSLLDLLKDWVTVRLGG

Sequences:

>Translated_211_residues
MARLSQELHRYFFEEDRGETVSLAQAIALAEEKVFGVILLLLAFPSALPIPAPGYSTPFGILIFAIALQLIFGRKKLWLP
VAWQRKTVKTTMAQGILKKGLPWLKKIEAIAHPRFPIVCQSRLGRTVMGCTIALMATSMMIPIPGTNTLPAMAIFLTAFG
LQEDDGLISGAGVVFSIVIAVLMVSVIYVFFNGGLSLLDLLKDWVTVRLGG
>Mature_210_residues
ARLSQELHRYFFEEDRGETVSLAQAIALAEEKVFGVILLLLAFPSALPIPAPGYSTPFGILIFAIALQLIFGRKKLWLPV
AWQRKTVKTTMAQGILKKGLPWLKKIEAIAHPRFPIVCQSRLGRTVMGCTIALMATSMMIPIPGTNTLPAMAIFLTAFGL
QEDDGLISGAGVVFSIVIAVLMVSVIYVFFNGGLSLLDLLKDWVTVRLGG

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010331 [H]

Pfam domain/function: PF06055 ExoD [H]

EC number: NA

Molecular weight: Translated: 23017; Mature: 22886

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLSQELHRYFFEEDRGETVSLAQAIALAEEKVFGVILLLLAFPSALPIPAPGYSTPFG
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
ILIFAIALQLIFGRKKLWLPVAWQRKTVKTTMAQGILKKGLPWLKKIEAIAHPRFPIVCQ
HHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHH
SRLGRTVMGCTIALMATSMMIPIPGTNTLPAMAIFLTAFGLQEDDGLISGAGVVFSIVIA
HHHCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
VLMVSVIYVFFNGGLSLLDLLKDWVTVRLGG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARLSQELHRYFFEEDRGETVSLAQAIALAEEKVFGVILLLLAFPSALPIPAPGYSTPFG
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
ILIFAIALQLIFGRKKLWLPVAWQRKTVKTTMAQGILKKGLPWLKKIEAIAHPRFPIVCQ
HHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHH
SRLGRTVMGCTIALMATSMMIPIPGTNTLPAMAIFLTAFGLQEDDGLISGAGVVFSIVIA
HHHCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
VLMVSVIYVFFNGGLSLLDLLKDWVTVRLGG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]