| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078486
Identifier: 170078486
GI number: 170078486
Start: 1969931
End: 1970149
Strand: Reverse
Name: 170078486
Synonym: SYNPCC7002_A1880
Alternate gene names: NA
Gene position: 1970149-1969931 (Counterclockwise)
Preceding gene: 170078487
Following gene: 170078485
Centisome position: 65.5
GC content: 53.88
Gene sequence:
>219_bases ATGAACACCATTGAGATGCTGCTCGCCATCGTGCGGGGCTATGAGGAAATTCTGGGTGTTGAAGGGCCGTCAGATCTTCC CCTCGAAAGTCGTTTGAGGGCTTTGTTAATGACCCTCACCCATTGCACGCGCCGCGCTGAGAACCTAAGCGAGCATTTAC AGCCTAAGCAGGTCTGGGCAGATGCGATCGCCATTGAGCGGGCCAGATTAAACCAGTAA
Upstream 100 bases:
>100_bases ACAAAGTTTTACTCAGAAGAGCCTTGGGTTCTAGAAACGGCTGCAAAACGAGCGGTCTCCCTTGCAGATGCAGTTTTGCT TGAAATGGCGCGACGGGAAT
Downstream 100 bases:
>100_bases TTATTTTTGGGCAAAAAAAAGGGGGGAGACCCCTCTCGCCCCTAGTGAAAATCAACTTCTTTAATGGAGGAAGAATATCA ATTATGTATAGCAATTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MNTIEMLLAIVRGYEEILGVEGPSDLPLESRLRALLMTLTHCTRRAENLSEHLQPKQVWADAIAIERARLNQ
Sequences:
>Translated_72_residues MNTIEMLLAIVRGYEEILGVEGPSDLPLESRLRALLMTLTHCTRRAENLSEHLQPKQVWADAIAIERARLNQ >Mature_72_residues MNTIEMLLAIVRGYEEILGVEGPSDLPLESRLRALLMTLTHCTRRAENLSEHLQPKQVWADAIAIERARLNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8197; Mature: 8197
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIEMLLAIVRGYEEILGVEGPSDLPLESRLRALLMTLTHCTRRAENLSEHLQPKQVWA CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH DAIAIERARLNQ HHHHHHHHHCCC >Mature Secondary Structure MNTIEMLLAIVRGYEEILGVEGPSDLPLESRLRALLMTLTHCTRRAENLSEHLQPKQVWA CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH DAIAIERARLNQ HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA