Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078479

Identifier: 170078479

GI number: 170078479

Start: 1965225

End: 1965707

Strand: Direct

Name: 170078479

Synonym: SYNPCC7002_A1873

Alternate gene names: NA

Gene position: 1965225-1965707 (Clockwise)

Preceding gene: 170078478

Following gene: 170078480

Centisome position: 65.33

GC content: 49.69

Gene sequence:

>483_bases
ATGGCAGTAGTTGATAGCTTTGGGGTTTGGGAAAATCTAGGGGTTGTGCGGCCTACCTTTGACTGGCAATTTTTACCACT
TTTCACCAATTCCCCTACTACTGCCCTGAGAATCATCTATTTTTCGGAAGTCCCAGAAGCTGGGTTTAATGCCCAGCACC
CCTGGGGTTATCTCCGGGGGGTTTACTTTTCGGGGTCTAGCTATTGGTTTGATCGGAATTGGCTCAGGCTTTACCCCAAG
GATGAGCCGGAGATTTTGCAATATCCCTATCCTCCAGATTTGATGAATGATCCGCTTCCCCAGCGGCAATACCAAGTAAA
GCTTTCTGATTCTCGGTATGCGCGGCGGCTGGCCATTGATCGCCGTTGGTCGTGTCAGCTCCTAGAAAAAATTGATAGCA
ATGTCACCTACCCCACCCAGGAGCCTGCTCCAGCACCCGCGTCTGAAACAACGCGCATTTTTAGGTTATTCCGAAGACAA
TGA

Upstream 100 bases:

>100_bases
ATGCCACTGGGTTAATGCGCCCTGCGACTAGGGCCGAGATGATCGATTATGTCGAAGGGGGAGAGTATGACGAGCGCCTG
GAGGCCATGGGAGAAGATGA

Downstream 100 bases:

>100_bases
GCTGCCCCCAGATTGCCACGAAAGAAGATATCGCAGCCCTTGAGGGTCGGTTGATCGAATCGCTCCACGCCAAAATCGAG
GCGGAAATTTCTGCTCTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAVVDSFGVWENLGVVRPTFDWQFLPLFTNSPTTALRIIYFSEVPEAGFNAQHPWGYLRGVYFSGSSYWFDRNWLRLYPK
DEPEILQYPYPPDLMNDPLPQRQYQVKLSDSRYARRLAIDRRWSCQLLEKIDSNVTYPTQEPAPAPASETTRIFRLFRRQ

Sequences:

>Translated_160_residues
MAVVDSFGVWENLGVVRPTFDWQFLPLFTNSPTTALRIIYFSEVPEAGFNAQHPWGYLRGVYFSGSSYWFDRNWLRLYPK
DEPEILQYPYPPDLMNDPLPQRQYQVKLSDSRYARRLAIDRRWSCQLLEKIDSNVTYPTQEPAPAPASETTRIFRLFRRQ
>Mature_159_residues
AVVDSFGVWENLGVVRPTFDWQFLPLFTNSPTTALRIIYFSEVPEAGFNAQHPWGYLRGVYFSGSSYWFDRNWLRLYPKD
EPEILQYPYPPDLMNDPLPQRQYQVKLSDSRYARRLAIDRRWSCQLLEKIDSNVTYPTQEPAPAPASETTRIFRLFRRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18947; Mature: 18815

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVDSFGVWENLGVVRPTFDWQFLPLFTNSPTTALRIIYFSEVPEAGFNAQHPWGYLRG
CCEECCCCCHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHEEE
VYFSGSSYWFDRNWLRLYPKDEPEILQYPYPPDLMNDPLPQRQYQVKLSDSRYARRLAID
EEECCCEEEEECCEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCC
RRWSCQLLEKIDSNVTYPTQEPAPAPASETTRIFRLFRRQ
CCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AVVDSFGVWENLGVVRPTFDWQFLPLFTNSPTTALRIIYFSEVPEAGFNAQHPWGYLRG
CEECCCCCHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHEEE
VYFSGSSYWFDRNWLRLYPKDEPEILQYPYPPDLMNDPLPQRQYQVKLSDSRYARRLAID
EEECCCEEEEECCEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCC
RRWSCQLLEKIDSNVTYPTQEPAPAPASETTRIFRLFRRQ
CCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA