Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078446

Identifier: 170078446

GI number: 170078446

Start: 1929285

End: 1929950

Strand: Reverse

Name: 170078446

Synonym: SYNPCC7002_A1840

Alternate gene names: NA

Gene position: 1929950-1929285 (Counterclockwise)

Preceding gene: 170078448

Following gene: 170078445

Centisome position: 64.16

GC content: 52.25

Gene sequence:

>666_bases
ATGGTTGCCTCTTCCCCTAGAACAGCGGGTCAAAATGTACGTCGCTTAGCCTTTAGACGTCGCCTCCAGTCCTGGCGGGC
TTTCTTGGCGGCGGGAGGACTCCCGGTCTTGGTGGTGTTCATGTTTCCGGTCTTGGCGATTGGTCTGGGGTTTATTGCGG
CGATCGTCATTGTGGCGATCGCCGCCTTTGGGGCAATGGGTTTTATTTTCCGGGGTTTAGATCTTTGGCAAGCCGCAAAC
CGTGCCGTTCAGGGGGCCAAAGCCGAGGAAAATGTCGCCAAAATTCTCCAGGAACTAGAGCCCCAGGGGTGGTCTTTTGA
ATATGGGATGCGCCTTGATGATGGCCTGGGGGATGCCGATGTGATTTGCTTTTCGCCCCAGCAAAAAACCTATGTCATTG
ATGTCAAATCCCATAAAGGCACGGTGATTTTCCAGGATCATCGGCTCCATCGCCGCATGGGGCGCACGATCTATGGCTTC
AAGAAAGATTTTTTGCAAATCGTGATGAAACAGGCGCTCCAGGTACGCGACAAAAAAAAGCTTAGTTTTGTTACGCCGCT
GTTGGTGTTTACCCGTGCCCAGTTAGCTGTCTCCCACAAAAAAATTCGGGGGGTTTATGTAATTGGCCAGGCGGATTTGG
TGGCGAAGTTGCAGGAATTGGGTTGA

Upstream 100 bases:

>100_bases
TGGGCAATAGAAAGAAAACTAAATTCCAGCTTTAGGATAACGACTTTTGGGTTGGATGTTTGGTGGATTATTGATGGATT
AACTTTTATCTGGGCTAGTT

Downstream 100 bases:

>100_bases
GCACTGGGATAGCTGTGGTCGTTCAAGGCGGTCGCGAATTACATCATTGTCCCAAAAATTTGATCGAGAAACAATTCAGA
CTCGCTTACGATCAAGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MVASSPRTAGQNVRRLAFRRRLQSWRAFLAAGGLPVLVVFMFPVLAIGLGFIAAIVIVAIAAFGAMGFIFRGLDLWQAAN
RAVQGAKAEENVAKILQELEPQGWSFEYGMRLDDGLGDADVICFSPQQKTYVIDVKSHKGTVIFQDHRLHRRMGRTIYGF
KKDFLQIVMKQALQVRDKKKLSFVTPLLVFTRAQLAVSHKKIRGVYVIGQADLVAKLQELG

Sequences:

>Translated_221_residues
MVASSPRTAGQNVRRLAFRRRLQSWRAFLAAGGLPVLVVFMFPVLAIGLGFIAAIVIVAIAAFGAMGFIFRGLDLWQAAN
RAVQGAKAEENVAKILQELEPQGWSFEYGMRLDDGLGDADVICFSPQQKTYVIDVKSHKGTVIFQDHRLHRRMGRTIYGF
KKDFLQIVMKQALQVRDKKKLSFVTPLLVFTRAQLAVSHKKIRGVYVIGQADLVAKLQELG
>Mature_221_residues
MVASSPRTAGQNVRRLAFRRRLQSWRAFLAAGGLPVLVVFMFPVLAIGLGFIAAIVIVAIAAFGAMGFIFRGLDLWQAAN
RAVQGAKAEENVAKILQELEPQGWSFEYGMRLDDGLGDADVICFSPQQKTYVIDVKSHKGTVIFQDHRLHRRMGRTIYGF
KKDFLQIVMKQALQVRDKKKLSFVTPLLVFTRAQLAVSHKKIRGVYVIGQADLVAKLQELG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24630; Mature: 24630

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVASSPRTAGQNVRRLAFRRRLQSWRAFLAAGGLPVLVVFMFPVLAIGLGFIAAIVIVAI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAFGAMGFIFRGLDLWQAANRAVQGAKAEENVAKILQELEPQGWSFEYGMRLDDGLGDAD
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCEECCCCCCCC
VICFSPQQKTYVIDVKSHKGTVIFQDHRLHRRMGRTIYGFKKDFLQIVMKQALQVRDKKK
EEEECCCCCEEEEEEECCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LSFVTPLLVFTRAQLAVSHKKIRGVYVIGQADLVAKLQELG
HHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHCC
>Mature Secondary Structure
MVASSPRTAGQNVRRLAFRRRLQSWRAFLAAGGLPVLVVFMFPVLAIGLGFIAAIVIVAI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAFGAMGFIFRGLDLWQAANRAVQGAKAEENVAKILQELEPQGWSFEYGMRLDDGLGDAD
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCEECCCCCCCC
VICFSPQQKTYVIDVKSHKGTVIFQDHRLHRRMGRTIYGFKKDFLQIVMKQALQVRDKKK
EEEECCCCCEEEEEEECCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LSFVTPLLVFTRAQLAVSHKKIRGVYVIGQADLVAKLQELG
HHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA