Click here to switch to the map view.

The map label for this gene is yceF [H]

Identifier: 170078439

GI number: 170078439

Start: 1921248

End: 1921955

Strand: Reverse

Name: yceF [H]

Synonym: SYNPCC7002_A1833

Alternate gene names: 170078439

Gene position: 1921955-1921248 (Counterclockwise)

Preceding gene: 170078441

Following gene: 170078438

Centisome position: 63.89

GC content: 50.56

Gene sequence:

>708_bases
ATGCTCGAGCAAATTCTTCATCCCCAGTTGCATTTCAGCTTAGAAACGTCTCTCATTCTCGTGATTTTGGTGGCCCTAGA
AGCTGTTCTTTCAGCCGATAATGCCATTGCCCTCGCGGCGATCGCCCAGGGGTTAGCCAGTCCGACCCAACAACGCAAAG
CCCTCAACATTGGTTTGATGGTGGCTTACATTCTCAGAATCACCCTCATTTTCACGGCAACTTGGGTGATCCATTATTGG
CAAGTAGAACTTTTGGGGGCATTGTATTTGCTGTGGCTGGTTTTTCGCTACTTTACCTCCCCTGAAGATGATAAAAATCA
CCACCATAGCCTAGAGTTCAAGTCCCTCTGGCAAGCGATTCCGATGATTGCGGTCACGGATTTAGCCTTTTCCCTCGATA
GCGTCACAACGGCGATCGCCGTCGCGGAAGACATTTGGTTGATTGTGCTTGGGGGCACCATTGGCGTTCTGACCCTCCGC
TTTCTGGCGGGGCTGTTTATCCGCTGGCTCGATGAATTTACCAACTTAGAAGATGCAGGTTTTGTGACCGTGGGCTTTGT
GGGGGTTCGTCTCCTCCTTAAGGCGGTTTATCCCAGTTTTGTGATGCCTGAATGGCTGATGATCACGGCGATCGCCGCCA
TGTTTATTTGGGGATTTTCTAAACGCAACCCTGATTTTGTCCCCCAAGAGGACTCGCCATCGCCCTAA

Upstream 100 bases:

>100_bases
AATGGCCTTAAGGTGACCCATTTGCCGCCACAGCAACCCGACGGGCGGTCTTTTTTTGTCTTGAATTGTTCTCAAAAGTT
TACTGTGTCGAATTTTTCCC

Downstream 100 bases:

>100_bases
TTTGTGCCTGGATCCCTTAGTCCGCCGTAGTTTCCCCTACGGCCTGTTTGCCATTCTCAGTAACTTTACATTTATTAAAT
AAACTTAATAAAACTCTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MLEQILHPQLHFSLETSLILVILVALEAVLSADNAIALAAIAQGLASPTQQRKALNIGLMVAYILRITLIFTATWVIHYW
QVELLGALYLLWLVFRYFTSPEDDKNHHHSLEFKSLWQAIPMIAVTDLAFSLDSVTTAIAVAEDIWLIVLGGTIGVLTLR
FLAGLFIRWLDEFTNLEDAGFVTVGFVGVRLLLKAVYPSFVMPEWLMITAIAAMFIWGFSKRNPDFVPQEDSPSP

Sequences:

>Translated_235_residues
MLEQILHPQLHFSLETSLILVILVALEAVLSADNAIALAAIAQGLASPTQQRKALNIGLMVAYILRITLIFTATWVIHYW
QVELLGALYLLWLVFRYFTSPEDDKNHHHSLEFKSLWQAIPMIAVTDLAFSLDSVTTAIAVAEDIWLIVLGGTIGVLTLR
FLAGLFIRWLDEFTNLEDAGFVTVGFVGVRLLLKAVYPSFVMPEWLMITAIAAMFIWGFSKRNPDFVPQEDSPSP
>Mature_235_residues
MLEQILHPQLHFSLETSLILVILVALEAVLSADNAIALAAIAQGLASPTQQRKALNIGLMVAYILRITLIFTATWVIHYW
QVELLGALYLLWLVFRYFTSPEDDKNHHHSLEFKSLWQAIPMIAVTDLAFSLDSVTTAIAVAEDIWLIVLGGTIGVLTLR
FLAGLFIRWLDEFTNLEDAGFVTVGFVGVRLLLKAVYPSFVMPEWLMITAIAAMFIWGFSKRNPDFVPQEDSPSP

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022493
- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 26299; Mature: 26299

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEQILHPQLHFSLETSLILVILVALEAVLSADNAIALAAIAQGLASPTQQRKALNIGLM
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
VAYILRITLIFTATWVIHYWQVELLGALYLLWLVFRYFTSPEDDKNHHHSLEFKSLWQAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
PMIAVTDLAFSLDSVTTAIAVAEDIWLIVLGGTIGVLTLRFLAGLFIRWLDEFTNLEDAG
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FVTVGFVGVRLLLKAVYPSFVMPEWLMITAIAAMFIWGFSKRNPDFVPQEDSPSP
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLEQILHPQLHFSLETSLILVILVALEAVLSADNAIALAAIAQGLASPTQQRKALNIGLM
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
VAYILRITLIFTATWVIHYWQVELLGALYLLWLVFRYFTSPEDDKNHHHSLEFKSLWQAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
PMIAVTDLAFSLDSVTTAIAVAEDIWLIVLGGTIGVLTLRFLAGLFIRWLDEFTNLEDAG
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FVTVGFVGVRLLLKAVYPSFVMPEWLMITAIAAMFIWGFSKRNPDFVPQEDSPSP
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274031; 9384377 [H]