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The map label for this gene is rbcS

Identifier: 170078402

GI number: 170078402

Start: 1881910

End: 1882245

Strand: Reverse

Name: rbcS

Synonym: SYNPCC7002_A1796

Alternate gene names: 170078402

Gene position: 1882245-1881910 (Counterclockwise)

Preceding gene: 170078403

Following gene: 170078401

Centisome position: 62.57

GC content: 47.02

Gene sequence:

>336_bases
ATGAAAACTTTACCTAAAGAAAAGCGTTACGAAACTCTTTCTTACTTGCCCCCCCTCAGCGACCAGCAAATCGCTCGCCA
AGTCCAGTACATGATGGATCAAGGCTATATTCCTGGTATCGAGTTCGAAAAAGATCCGACTCCTGAACTCCACCACTGGA
CACTGTGGAAGCTGCCCCTTTTCAACGCAAGCTCTGCTCAAGAAGTACTCAACGAAGTGCGTGAGTGCCGTAGTGAATAT
TCTGACTGCTACATCCGTGTTGTTGGTTTCGACAACATCAAGCAGTGCCAAACCGTTAGCTTCATCGTTTACAAGCCCAA
CCAAACCCGTTACTAA

Upstream 100 bases:

>100_bases
TGATTCTTCATCAACTGATCAGACTGAACCTAACCCTGGTGAGTCTGATACTTCAGAAGATTCTGAATAAACTTTGATCC
GATAAAGAGGACATAAATCA

Downstream 100 bases:

>100_bases
GGTTTTGTTGGTTTTTGTGACCTGAATTTAATTTGAATCATGCGGAATGCGATCGCCTTAGGACGGTCGCATTTTTTGTT
TACGTCTAAAATTAGTCGAA

Product: ribulose bisphosphate carboxylase, small subunit

Products: NA

Alternate protein names: RuBisCO small subunit

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MKTLPKEKRYETLSYLPPLSDQQIARQVQYMMDQGYIPGIEFEKDPTPELHHWTLWKLPLFNASSAQEVLNEVRECRSEY
SDCYIRVVGFDNIKQCQTVSFIVYKPNQTRY

Sequences:

>Translated_111_residues
MKTLPKEKRYETLSYLPPLSDQQIARQVQYMMDQGYIPGIEFEKDPTPELHHWTLWKLPLFNASSAQEVLNEVRECRSEY
SDCYIRVVGFDNIKQCQTVSFIVYKPNQTRY
>Mature_111_residues
MKTLPKEKRYETLSYLPPLSDQQIARQVQYMMDQGYIPGIEFEKDPTPELHHWTLWKLPLFNASSAQEVLNEVRECRSEY
SDCYIRVVGFDNIKQCQTVSFIVYKPNQTRY

Specific function: RuBisCO catalyzes two reactions:the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the

COG id: COG4451

COG function: function code C; Ribulose bisphosphate carboxylase small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO small chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RBS_SYNP2 (Q44178)

Other databases:

- EMBL:   D13971
- EMBL:   CP000951
- RefSeq:   YP_001735040.1
- ProteinModelPortal:   Q44178
- SMR:   Q44178
- GeneID:   6056501
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1796
- HOGENOM:   HBG608223
- OMA:   SFIVHKP
- ProtClustDB:   CLSK893428
- InterPro:   IPR000894
- Gene3D:   G3DSA:3.30.190.10
- PRINTS:   PR00152
- SMART:   SM00961

Pfam domain/function: PF00101 RuBisCO_small; SSF55239 RuBisCO_small

EC number: =4.1.1.39

Molecular weight: Translated: 13212; Mature: 13212

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLPKEKRYETLSYLPPLSDQQIARQVQYMMDQGYIPGIEFEKDPTPELHHWTLWKLPL
CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEC
FNASSAQEVLNEVRECRSEYSDCYIRVVGFDNIKQCQTVSFIVYKPNQTRY
CCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MKTLPKEKRYETLSYLPPLSDQQIARQVQYMMDQGYIPGIEFEKDPTPELHHWTLWKLPL
CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEC
FNASSAQEVLNEVRECRSEYSDCYIRVVGFDNIKQCQTVSFIVYKPNQTRY
CCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA