Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is bioC [C]

Identifier: 170078389

GI number: 170078389

Start: 1868604

End: 1869560

Strand: Direct

Name: bioC [C]

Synonym: SYNPCC7002_A1783

Alternate gene names: 170078389

Gene position: 1868604-1869560 (Clockwise)

Preceding gene: 170078386

Following gene: 170078390

Centisome position: 62.12

GC content: 51.72

Gene sequence:

>957_bases
ATGACCCACACTGCGATCACCAAAGAAAAACCCGATTGGGCTGGGGAAGACTGGTTATCCCGCCTCGTCAACCGTCTGAT
CCAAACAAAGCCCCTCTACGCTCTGATGAAACAACAGGCCCGGCGCGTTCTGATCAAAACCGCCGAAAAAAATGGTGTTC
CCTGGCGGCAGACTGTGAAGGAATTGGAGCAATCCCCCGCCAAACAATATTTCCAAGACATCGCCAATCCCCACCTGGAC
TACCCCGACTATTACCGAGTCCCCTTCCATGCCTATAACGAAGGGAATTTATGTTGGCAAGCAGCCTTTGAGGCGGCCCC
GGCGACGGCAGCGATGGCCCTACGGGTTTGGAAAACGGAACCCCTCACCCCAGAAGTGGCTCAGGCCCGACTCCGCAATA
GTTTTTTAGATGTCCTTGAACAATATTTGCCCCAGAACGTAAACGAAGTCTTGGATATCGGTTGCTCCGTGGGGATTTCG
ACCTTTGCGCTTCTAGAACGACTCCAGGCCAAAAATCCAGCAGTTGAGGTAACGGGCCTAGATCTTTCGCCCCATATGCT
CGCGGTGGCTAAGGTTCAAGATAAAAATCAGGCGGTGCAATGGTGCCATGGCAAGGCGGAAACGACGGAGTTTACCGATG
ATCGATTCGATTTAATTACCTTGCAATTTGTCCTCCATGAACTGCCCAACCAGGCCACCCGCGAAATTTTCCAGGAATGC
CGACGCATTTTGCGGCCCGGAGGTTGTTTGGCGATCGTCGATAACAATCCGAAATCTCCGGTGATTCAGGGTTTACCGCC
AGCCTTGTTTGTGTTGATGAAGAGTACAGAACCTTGGAGTGACGAATATTATACTTTTGATGTAGAATCGACACTAAAGG
AAGTCGGTTTTGATTACCGCACCACCGTCGCCAGTGATCCGCGCCACCGCACGATCATTGCCCACAAGCCCTTTTAA

Upstream 100 bases:

>100_bases
CCGTCTCCCGTTAGGGAAAACAAGGGATTTCAGCAATGGCGGTAAAATAGACCCAGTTTCTGTGTTTTACATCCGCTGAC
AAAAGCCCCCAACGTTATCC

Downstream 100 bases:

>100_bases
TTGTTTGCCAAATGTTTGCCGAATGAAAATTGCGATCGCCCAACTGAACCCCACCATCGGGGACTTGACTGGTAATGCCG
AGCGGATCCTGGTCGCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase; Methyltransferase Domain Family; SAM-Dependent Methyltransferase; UbiE/COQ5 Family Methlytransferase; Methyltransferase UbiE/COQ5 Family; Methyltransferase UbiE; Demethylmenaquinone Methyltransferase; Methlytransferase; UbiE/COQ5 Methyltransferase

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MTHTAITKEKPDWAGEDWLSRLVNRLIQTKPLYALMKQQARRVLIKTAEKNGVPWRQTVKELEQSPAKQYFQDIANPHLD
YPDYYRVPFHAYNEGNLCWQAAFEAAPATAAMALRVWKTEPLTPEVAQARLRNSFLDVLEQYLPQNVNEVLDIGCSVGIS
TFALLERLQAKNPAVEVTGLDLSPHMLAVAKVQDKNQAVQWCHGKAETTEFTDDRFDLITLQFVLHELPNQATREIFQEC
RRILRPGGCLAIVDNNPKSPVIQGLPPALFVLMKSTEPWSDEYYTFDVESTLKEVGFDYRTTVASDPRHRTIIAHKPF

Sequences:

>Translated_318_residues
MTHTAITKEKPDWAGEDWLSRLVNRLIQTKPLYALMKQQARRVLIKTAEKNGVPWRQTVKELEQSPAKQYFQDIANPHLD
YPDYYRVPFHAYNEGNLCWQAAFEAAPATAAMALRVWKTEPLTPEVAQARLRNSFLDVLEQYLPQNVNEVLDIGCSVGIS
TFALLERLQAKNPAVEVTGLDLSPHMLAVAKVQDKNQAVQWCHGKAETTEFTDDRFDLITLQFVLHELPNQATREIFQEC
RRILRPGGCLAIVDNNPKSPVIQGLPPALFVLMKSTEPWSDEYYTFDVESTLKEVGFDYRTTVASDPRHRTIIAHKPF
>Mature_317_residues
THTAITKEKPDWAGEDWLSRLVNRLIQTKPLYALMKQQARRVLIKTAEKNGVPWRQTVKELEQSPAKQYFQDIANPHLDY
PDYYRVPFHAYNEGNLCWQAAFEAAPATAAMALRVWKTEPLTPEVAQARLRNSFLDVLEQYLPQNVNEVLDIGCSVGIST
FALLERLQAKNPAVEVTGLDLSPHMLAVAKVQDKNQAVQWCHGKAETTEFTDDRFDLITLQFVLHELPNQATREIFQECR
RILRPGGCLAIVDNNPKSPVIQGLPPALFVLMKSTEPWSDEYYTFDVESTLKEVGFDYRTTVASDPRHRTIIAHKPF

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36292; Mature: 36161

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHTAITKEKPDWAGEDWLSRLVNRLIQTKPLYALMKQQARRVLIKTAEKNGVPWRQTVK
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ELEQSPAKQYFQDIANPHLDYPDYYRVPFHAYNEGNLCWQAAFEAAPATAAMALRVWKTE
HHHHCHHHHHHHHHCCCCCCCCCCEECCEEEECCCCCHHHHHHHCCCHHHHHHHHHHCCC
PLTPEVAQARLRNSFLDVLEQYLPQNVNEVLDIGCSVGISTFALLERLQAKNPAVEVTGL
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
DLSPHMLAVAKVQDKNQAVQWCHGKAETTEFTDDRFDLITLQFVLHELPNQATREIFQEC
CCCCCCEEEEHHHCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
RRILRPGGCLAIVDNNPKSPVIQGLPPALFVLMKSTEPWSDEYYTFDVESTLKEVGFDYR
HHHHCCCCEEEEECCCCCCCCCCCCCHHHHHEECCCCCCCCCCEEEEHHHHHHHCCCCCE
TTVASDPRHRTIIAHKPF
ECCCCCCCCCEEEEECCC
>Mature Secondary Structure 
THTAITKEKPDWAGEDWLSRLVNRLIQTKPLYALMKQQARRVLIKTAEKNGVPWRQTVK
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ELEQSPAKQYFQDIANPHLDYPDYYRVPFHAYNEGNLCWQAAFEAAPATAAMALRVWKTE
HHHHCHHHHHHHHHCCCCCCCCCCEECCEEEECCCCCHHHHHHHCCCHHHHHHHHHHCCC
PLTPEVAQARLRNSFLDVLEQYLPQNVNEVLDIGCSVGISTFALLERLQAKNPAVEVTGL
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
DLSPHMLAVAKVQDKNQAVQWCHGKAETTEFTDDRFDLITLQFVLHELPNQATREIFQEC
CCCCCCEEEEHHHCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
RRILRPGGCLAIVDNNPKSPVIQGLPPALFVLMKSTEPWSDEYYTFDVESTLKEVGFDYR
HHHHCCCCEEEEECCCCCCCCCCCCCHHHHHEECCCCCCCCCCEEEEHHHHHHHCCCCCE
TTVASDPRHRTIIAHKPF
ECCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA